RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 IGF2BP2-AS1Q96M15 143 aa8.31□□□□□ -1.08
BRCA1-225ENST00000586385 KRTAP1-5Q9BYS1 174 aa8.31□□□□□ -1.08
BRCA1-225ENST00000586385 MIXL1Q9H2W2 232 aa8.31□□□□□ -1.08
BRCA1-225ENST00000586385 RBKSQ9H477 322 aa8.31□□□□□ -1.08
BRCA1-225ENST00000586385 TMED3Q9Y3Q3 217 aa8.31□□□□□ -1.08
BRCA1-225ENST00000586385 LINC00588Q9Y4M8 146 aa8.31□□□□□ -1.08
BRCA1-225ENST00000586385 HERC1Q15751 4861 aa8.31□□□□□ -1.08
BRCA1-225ENST00000586385 A0A087WXM4 84 aa8.3□□□□□ -1.08
BRCA1-225ENST00000586385 ZFP92A6NM28 416 aa8.3□□□□□ -1.08
BRCA1-225ENST00000586385 SULT1A3P0DMM9 295 aa8.3□□□□□ -1.08
BRCA1-225ENST00000586385 SULT1A4P0DMN0 295 aa8.3□□□□□ -1.08
BRCA1-225ENST00000586385 AZU1P20160 251 aa8.3□□□□□ -1.08
BRCA1-225ENST00000586385 ALDH3B2P48448 385 aa8.3□□□□□ -1.08
BRCA1-225ENST00000586385 FCN2Q15485 313 aa8.3□□□□□ -1.08
BRCA1-225ENST00000586385 EBLN2Q6P2I7 272 aa8.3□□□□□ -1.08
BRCA1-225ENST00000586385 LGI3Q8N145 548 aa8.3□□□□□ -1.08
BRCA1-225ENST00000586385 DTD1Q8TEA8 209 aa8.3□□□□□ -1.08
BRCA1-225ENST00000586385 MAGT1Q9H0U3 335 aa8.3□□□□□ -1.08
BRCA1-225ENST00000586385 SLC25A32Q9H2D1 315 aa8.3□□□□□ -1.08
BRCA1-225ENST00000586385 DOK5Q9P104 306 aa8.3□□□□□ -1.08
BRCA1-225ENST00000586385 C14orf166Q9Y224 244 aaKnown RBP8.3□□□□□ -1.08
BRCA1-225ENST00000586385 U3KQ87 197 aa8.3□□□□□ -1.08
BRCA1-225ENST00000586385 TRAV8-2A0A0B4J237 113 aa8.29□□□□□ -1.08
BRCA1-225ENST00000586385 LYRM9A8MSI8 78 aa8.29□□□□□ -1.08
BRCA1-225ENST00000586385 GABARAPH6UMI1 98 aa8.29□□□□□ -1.08
BRCA1-225ENST00000586385 M0R2Z0 102 aa8.29□□□□□ -1.08
BRCA1-225ENST00000586385 GABARAPO95166 117 aa8.29□□□□□ -1.08
BRCA1-225ENST00000586385 TNFAIP8O95379 198 aa8.29□□□□□ -1.08
BRCA1-225ENST00000586385 DEFB130BP0DP73 79 aa8.29□□□□□ -1.08
BRCA1-225ENST00000586385 DEFB130AP0DP74 79 aa8.29□□□□□ -1.08
BRCA1-225ENST00000586385 GPX4P36969 197 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-225ENST00000586385 KRTAP10-2P60368 255 aa8.29□□□□□ -1.08
BRCA1-225ENST00000586385 SURF2Q15527 256 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-225ENST00000586385 CTF1Q16619 201 aa8.29□□□□□ -1.08
BRCA1-225ENST00000586385 SPINK13Q1W4C9 94 aa8.29□□□□□ -1.08
BRCA1-225ENST00000586385 IGFL4Q6B9Z1 124 aa8.29□□□□□ -1.08
BRCA1-225ENST00000586385 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.29□□□□□ -1.08
BRCA1-225ENST00000586385 LYZL2Q7Z4W2 148 aa8.29□□□□□ -1.08
BRCA1-225ENST00000586385 NOXA1Q86UR1 476 aa8.29□□□□□ -1.08
BRCA1-225ENST00000586385 OR8I2Q8N0Y5 310 aa8.29□□□□□ -1.08
BRCA1-225ENST00000586385 OR11H7Q8NGC8 314 aa8.29□□□□□ -1.08
BRCA1-225ENST00000586385 OR4C16Q8NGL9 310 aa8.29□□□□□ -1.08
BRCA1-225ENST00000586385 IL22RA2Q969J5 263 aa8.29□□□□□ -1.08
BRCA1-225ENST00000586385 ATG101Q9BSB4 218 aa8.29□□□□□ -1.08
BRCA1-225ENST00000586385 SCRT2Q9NQ03 307 aa8.29□□□□□ -1.08
BRCA1-225ENST00000586385 CNN1P51911 297 aaKnown RBP8.28□□□□□ -1.08
BRCA1-225ENST00000586385 MZT2AQ6P582 158 aa8.28□□□□□ -1.08
BRCA1-225ENST00000586385 TMEM182Q6ZP80 229 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-225ENST00000586385 SPATA12Q7Z6I5 190 aa8.28□□□□□ -1.08
BRCA1-225ENST00000586385 BAP18Q8IXM2 172 aa8.28□□□□□ -1.08
BRCA1-225ENST00000586385 THAP8Q8NA92 274 aa8.28□□□□□ -1.08
BRCA1-225ENST00000586385 RNF141Q8WVD5 230 aa8.28□□□□□ -1.08
BRCA1-225ENST00000586385 TRGV9Q99603 122 aa8.28□□□□□ -1.08
BRCA1-225ENST00000586385 RPRMQ9NS64 109 aa8.28□□□□□ -1.08
BRCA1-225ENST00000586385 SNRPGP15A8MWD9 76 aa8.27□□□□□ -1.09
BRCA1-225ENST00000586385 PRSS46E5RG02 174 aa8.27□□□□□ -1.09
BRCA1-225ENST00000586385 F5H768 121 aa8.27□□□□□ -1.09
BRCA1-225ENST00000586385 PITX3O75364 302 aa8.27□□□□□ -1.09
BRCA1-225ENST00000586385 NUDT3O95989 172 aa8.27□□□□□ -1.09
BRCA1-225ENST00000586385 ZNF182P17025 639 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-225ENST00000586385 TSPOP30536 169 aa8.27□□□□□ -1.09
BRCA1-225ENST00000586385 CCR6P51684 374 aa8.27□□□□□ -1.09
BRCA1-225ENST00000586385 SMCO1Q147U7 214 aa8.27□□□□□ -1.09
BRCA1-225ENST00000586385 RNF182Q8N6D2 247 aa8.27□□□□□ -1.09
BRCA1-225ENST00000586385 OR51S1Q8NGJ8 323 aa8.27□□□□□ -1.09
BRCA1-225ENST00000586385 SMIM4Q8WVI0 70 aa8.27□□□□□ -1.09
BRCA1-225ENST00000586385 SLC35E1Q96K37 410 aa8.27□□□□□ -1.09
BRCA1-225ENST00000586385 C16orf92Q96LL3 132 aa8.27□□□□□ -1.09
BRCA1-225ENST00000586385 TMEM208Q9BTX3 173 aa8.27□□□□□ -1.09
BRCA1-225ENST00000586385 RSG1Q9BU20 258 aa8.27□□□□□ -1.09
BRCA1-225ENST00000586385 VCX3AQ9NNX9 186 aa8.27□□□□□ -1.09
BRCA1-225ENST00000586385 PFDN2Q9UHV9 154 aa8.27□□□□□ -1.09
BRCA1-225ENST00000586385 TRAV12-2A0A075B6T6 113 aa8.26□□□□□ -1.09
BRCA1-225ENST00000586385 A0A0B4J2A0 478 aa8.26□□□□□ -1.09
BRCA1-225ENST00000586385 ZNF98A6NK75 572 aa8.26□□□□□ -1.09
BRCA1-225ENST00000586385 CTDSP2O14595 271 aa8.26□□□□□ -1.09
BRCA1-225ENST00000586385 INSP01308 110 aa8.26□□□□□ -1.09
BRCA1-225ENST00000586385 PRB4P10163 310 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-225ENST00000586385 GATA2P23769 480 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-225ENST00000586385 MEOX2P50222 304 aa8.26□□□□□ -1.09
BRCA1-225ENST00000586385 SSBP1Q04837 148 aaKnown RBP8.26□□□□□ -1.09
BRCA1-225ENST00000586385 PPP1R14BQ96C90 147 aa8.26□□□□□ -1.09
BRCA1-225ENST00000586385 CACFD1Q9UGQ2 172 aa8.26□□□□□ -1.09
BRCA1-225ENST00000586385 SHPKQ9UHJ6 478 aa8.26□□□□□ -1.09
BRCA1-225ENST00000586385 DISC1C4P0D8 188 aa8.25□□□□□ -1.09
BRCA1-225ENST00000586385 GALR1P47211 349 aa8.25□□□□□ -1.09
BRCA1-225ENST00000586385 ATP5IP56385 69 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-225ENST00000586385 SSX7Q7RTT5 188 aa8.25□□□□□ -1.09
BRCA1-225ENST00000586385 AP3S1Q92572 193 aa8.25□□□□□ -1.09
BRCA1-225ENST00000586385 SLC25A39Q9BZJ4 359 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-225ENST00000586385 SLC25A22Q9H936 323 aa8.25□□□□□ -1.09
BRCA1-225ENST00000586385 CBY3A6NI87 242 aa8.24□□□□□ -1.09
BRCA1-225ENST00000586385 ATP5G1P05496 136 aa8.24□□□□□ -1.09
BRCA1-225ENST00000586385 AKAIN1P0CW23 69 aa8.24□□□□□ -1.09
BRCA1-225ENST00000586385 IAPPP10997 89 aa8.24□□□□□ -1.09
BRCA1-225ENST00000586385 ATP5G3P48201 142 aa8.24□□□□□ -1.09
BRCA1-225ENST00000586385 CCL18P55774 89 aa8.24□□□□□ -1.09
BRCA1-225ENST00000586385 SAMD13Q5VXD3 122 aa8.24□□□□□ -1.09
BRCA1-225ENST00000586385 C15orf40Q8WUR7 153 aa8.24□□□□□ -1.09
BRCA1-225ENST00000586385 Q9H8V8 135 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms