RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 AMY1AP04745 511 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 ORM2P19652 201 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 CEBPGP53567 150 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 ECSCRQ19T08 205 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 TMEM241Q24JQ0 296 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 TIGITQ495A1 244 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 Q56UQ5 140 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 C19orf35Q6ZS72 473 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 LINC00305Q7Z4B0 112 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 TMEM219Q86XT9 240 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 FAM223AQ8IWN6 122 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 OR1B1Q8NGR6 318 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 RPUSD4Q96CM3 377 aaKnown RBP8.13□□□□□ -1.11
LIG3-203ENST00000585370 FAM167A-AS1Q96KT0 104 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 PAXXQ9BUH6 204 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 OR51M1Q9H341 326 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 PRDM13Q9H4Q3 707 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 ZNF355PQ9NSJ1 428 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 MRPL27Q9P0M9 148 aaKnown RBP8.13□□□□□ -1.11
LIG3-203ENST00000585370 NAT8Q9UHE5 227 aa8.13□□□□□ -1.11
LIG3-203ENST00000585370 WI2-2373I1.2A0A1W2PRP0 233 aa8.12□□□□□ -1.11
LIG3-203ENST00000585370 DNASE2O00115 360 aaPredicted RBP8.12□□□□□ -1.11
LIG3-203ENST00000585370 AP4M1O00189 453 aa8.12□□□□□ -1.11
LIG3-203ENST00000585370 NUPL2O15504 423 aaKnown RBP8.12□□□□□ -1.11
LIG3-203ENST00000585370 EIF3GO75821 320 aaKnown RBP eCLIP8.12□□□□□ -1.11
LIG3-203ENST00000585370 OR2J3O76001 311 aa8.12□□□□□ -1.11
LIG3-203ENST00000585370 OR2C1O95371 312 aa8.12□□□□□ -1.11
LIG3-203ENST00000585370 IER3P46695 156 aa8.12□□□□□ -1.11
LIG3-203ENST00000585370 UBE2G2P60604 165 aa8.12□□□□□ -1.11
LIG3-203ENST00000585370 DEFB112Q30KQ8 113 aa8.12□□□□□ -1.11
LIG3-203ENST00000585370 AWAT1Q58HT5 328 aa8.12□□□□□ -1.11
LIG3-203ENST00000585370 C19orf54Q5BKX5 351 aa8.12□□□□□ -1.11
LIG3-203ENST00000585370 OR5AU1Q8NGC0 362 aa8.12□□□□□ -1.11
LIG3-203ENST00000585370 ZNF502Q8TBZ5 544 aa8.12□□□□□ -1.11
LIG3-203ENST00000585370 EEF1AKMT3Q96AZ1 226 aa8.12□□□□□ -1.11
LIG3-203ENST00000585370 USMG5Q96IX5 58 aa8.12□□□□□ -1.11
LIG3-203ENST00000585370 SMIM7Q9BQ49 75 aa8.12□□□□□ -1.11
LIG3-203ENST00000585370 SLC25A2Q9BXI2 301 aa8.12□□□□□ -1.11
LIG3-203ENST00000585370 SDF2L1Q9HCN8 221 aa8.12□□□□□ -1.11
LIG3-203ENST00000585370 RPS10P5Q9NQ39 176 aa8.12□□□□□ -1.11
LIG3-203ENST00000585370 TMEM14CQ9P0S9 112 aa8.12□□□□□ -1.11
LIG3-203ENST00000585370 DOK5Q9P104 306 aa8.12□□□□□ -1.11
LIG3-203ENST00000585370 MEGF8Q7Z7M0 2845 aa8.11□□□□□ -1.11
LIG3-203ENST00000585370 CXorf65A6NEN9 183 aa8.11□□□□□ -1.11
LIG3-203ENST00000585370 LYZP61626 148 aa8.11□□□□□ -1.11
LIG3-203ENST00000585370 RHOGP84095 191 aa8.11□□□□□ -1.11
LIG3-203ENST00000585370 ATP5G2Q06055 141 aa8.11□□□□□ -1.11
LIG3-203ENST00000585370 LY6EQ16553 131 aa8.11□□□□□ -1.11
LIG3-203ENST00000585370 C9orf152Q5JTZ5 239 aa8.11□□□□□ -1.11
LIG3-203ENST00000585370 FAM209BQ5JX69 171 aa8.11□□□□□ -1.11
LIG3-203ENST00000585370 C12orf54Q6X4T0 127 aa8.11□□□□□ -1.11
LIG3-203ENST00000585370 Q6YL49 198 aa8.11□□□□□ -1.11
LIG3-203ENST00000585370 ZNF491Q8N8L2 437 aa8.11□□□□□ -1.11
LIG3-203ENST00000585370 C11orf52Q96A22 123 aa8.11□□□□□ -1.11
LIG3-203ENST00000585370 ZNF503Q96F45 646 aa8.11□□□□□ -1.11
LIG3-203ENST00000585370 CTDSP1Q9GZU7 261 aa8.11□□□□□ -1.11
LIG3-203ENST00000585370 TMEM242Q9NWH2 141 aa8.11□□□□□ -1.11
LIG3-203ENST00000585370 TMEM89A2RUT3 159 aa8.1□□□□□ -1.11
LIG3-203ENST00000585370 LINC01548A6NM66 108 aa8.1□□□□□ -1.11
LIG3-203ENST00000585370 CTSGP08311 255 aa8.1□□□□□ -1.11
LIG3-203ENST00000585370 RAB9AP51151 201 aa8.1□□□□□ -1.11
LIG3-203ENST00000585370 UBE2L3P68036 154 aaKnown RBP8.1□□□□□ -1.11
LIG3-203ENST00000585370 C15orf32Q32M92 178 aa8.1□□□□□ -1.11
LIG3-203ENST00000585370 ZNF600Q6ZNG1 722 aa8.1□□□□□ -1.11
LIG3-203ENST00000585370 RNF125Q96EQ8 232 aa8.1□□□□□ -1.11
LIG3-203ENST00000585370 SHANK2-AS3Q9BTD1 123 aa8.1□□□□□ -1.11
LIG3-203ENST00000585370 SLC25A39Q9BZJ4 359 aaPredicted RBP8.1□□□□□ -1.11
LIG3-203ENST00000585370 PARLQ9H300 379 aa8.1□□□□□ -1.11
LIG3-203ENST00000585370 YTHDF2Q9Y5A9 579 aaKnown RBP8.1□□□□□ -1.11
LIG3-203ENST00000585370 LY96Q9Y6Y9 160 aa8.1□□□□□ -1.11
LIG3-203ENST00000585370 TRAV5A0A0B4J249 113 aa8.09□□□□□ -1.11
LIG3-203ENST00000585370 A0A0G2JLM5 398 aa8.09□□□□□ -1.11
LIG3-203ENST00000585370 F8W735 103 aaPredicted RBP8.09□□□□□ -1.11
LIG3-203ENST00000585370 G3V318 75 aa8.09□□□□□ -1.11
LIG3-203ENST00000585370 NDUFB4O95168 129 aa8.09□□□□□ -1.11
LIG3-203ENST00000585370 MT-ND4LP03901 98 aa8.09□□□□□ -1.11
LIG3-203ENST00000585370 IL4P05112 153 aa8.09□□□□□ -1.11
LIG3-203ENST00000585370 NBEAP1P0C6P0 100 aa8.09□□□□□ -1.11
LIG3-203ENST00000585370 HIST1H1EP10412 219 aaKnown RBP8.09□□□□□ -1.11
LIG3-203ENST00000585370 ATP5G3P48201 142 aa8.09□□□□□ -1.11
LIG3-203ENST00000585370 RELQ04864 619 aaPredicted RBP8.09□□□□□ -1.11
LIG3-203ENST00000585370 ZNF674Q2M3X9 581 aa8.09□□□□□ -1.11
LIG3-203ENST00000585370 BPIFA4PQ86YQ2 179 aa8.09□□□□□ -1.11
LIG3-203ENST00000585370 BCL6BQ8N143 479 aaPredicted RBP8.09□□□□□ -1.11
LIG3-203ENST00000585370 TMEM86BQ8N661 226 aa8.09□□□□□ -1.11
LIG3-203ENST00000585370 C15orf54Q8N8G6 183 aa8.09□□□□□ -1.11
LIG3-203ENST00000585370 FXYD5Q96DB9 178 aa8.09□□□□□ -1.11
LIG3-203ENST00000585370 VPREB3Q9UKI3 123 aa8.09□□□□□ -1.11
LIG3-203ENST00000585370 SOX21Q9Y651 276 aaPredicted RBP8.09□□□□□ -1.11
LIG3-203ENST00000585370 H3BRN7 92 aa8.08□□□□□ -1.12
LIG3-203ENST00000585370 BMPR1BO00238 502 aa8.08□□□□□ -1.12
LIG3-203ENST00000585370 IGHV4-59P01825 116 aa8.08□□□□□ -1.12
LIG3-203ENST00000585370 TRGV3P03979 118 aa8.08□□□□□ -1.12
LIG3-203ENST00000585370 CLEC3BP05452 202 aa8.08□□□□□ -1.12
LIG3-203ENST00000585370 S100A9P06702 114 aaKnown RBP8.08□□□□□ -1.12
LIG3-203ENST00000585370 PPIFP30405 207 aaKnown RBP8.08□□□□□ -1.12
LIG3-203ENST00000585370 HILS1P60008 231 aa8.08□□□□□ -1.12
LIG3-203ENST00000585370 SUMO1P63165 101 aaKnown RBP8.08□□□□□ -1.12
LIG3-203ENST00000585370 SCGB2A2Q13296 93 aa8.08□□□□□ -1.12
LIG3-203ENST00000585370 MORN5Q5VZ52 161 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms