RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 COX7A2P2O60397 106 aa11.92□□□□□ -0.5
CDK5RAP3-236ENST00000584991 IGLV2-23P01705 113 aa11.92□□□□□ -0.5
CDK5RAP3-236ENST00000584991 AMY1AP04745 511 aa11.92□□□□□ -0.5
CDK5RAP3-236ENST00000584991 BRS3P32247 399 aa11.92□□□□□ -0.5
CDK5RAP3-236ENST00000584991 CEACAM3P40198 252 aa11.92□□□□□ -0.5
CDK5RAP3-236ENST00000584991 UBE2L3P68036 154 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-236ENST00000584991 OR5I1Q13606 314 aa11.92□□□□□ -0.5
CDK5RAP3-236ENST00000584991 TEX45Q8NA69 505 aa11.92□□□□□ -0.5
CDK5RAP3-236ENST00000584991 C20orf144Q9BQM9 153 aa11.92□□□□□ -0.5
CDK5RAP3-236ENST00000584991 IZUMO1RA6ND01 250 aa11.91□□□□□ -0.5
CDK5RAP3-236ENST00000584991 M0QZK8 103 aa11.91□□□□□ -0.5
CDK5RAP3-236ENST00000584991 CORTO00230 105 aa11.91□□□□□ -0.5
CDK5RAP3-236ENST00000584991 UBE2E1P51965 193 aa11.91□□□□□ -0.5
CDK5RAP3-236ENST00000584991 TEX43Q6ZNM6 134 aa11.91□□□□□ -0.5
CDK5RAP3-236ENST00000584991 TMEM136Q6ZRR5 245 aa11.91□□□□□ -0.5
CDK5RAP3-236ENST00000584991 PAXXQ9BUH6 204 aa11.91□□□□□ -0.5
CDK5RAP3-236ENST00000584991 HIF1ANQ9NWT6 349 aa11.91□□□□□ -0.5
CDK5RAP3-236ENST00000584991 NAT8BQ9UHF3 227 aa11.91□□□□□ -0.5
CDK5RAP3-236ENST00000584991 A0A1W2PPI3 338 aa11.91□□□□□ -0.5
CDK5RAP3-236ENST00000584991 SERF1AO75920 110 aa11.91□□□□□ -0.5
CDK5RAP3-236ENST00000584991 CRYGCP07315 174 aa11.91□□□□□ -0.5
CDK5RAP3-236ENST00000584991 GATA2P23769 480 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-236ENST00000584991 WT1-ASQ06250 92 aa11.91□□□□□ -0.5
CDK5RAP3-236ENST00000584991 LINC01356Q8N9X3 169 aa11.91□□□□□ -0.5
CDK5RAP3-236ENST00000584991 OR2T6Q8NHC8 308 aa11.91□□□□□ -0.5
CDK5RAP3-236ENST00000584991 CENPVL3A0A0U1RRI6 287 aa11.9□□□□□ -0.5
CDK5RAP3-236ENST00000584991 GRIFINA4D1Z8 144 aa11.9□□□□□ -0.5
CDK5RAP3-236ENST00000584991 LINC00310P59036 64 aa11.9□□□□□ -0.5
CDK5RAP3-236ENST00000584991 MLANAQ16655 118 aa11.9□□□□□ -0.5
CDK5RAP3-236ENST00000584991 MINOS1Q5TGZ0 78 aa11.9□□□□□ -0.5
CDK5RAP3-236ENST00000584991 C22orf15Q8WYQ4 148 aa11.9□□□□□ -0.5
CDK5RAP3-236ENST00000584991 MISP3Q96FF7 219 aa11.9□□□□□ -0.5
CDK5RAP3-236ENST00000584991 TRGV9Q99603 122 aa11.9□□□□□ -0.5
CDK5RAP3-236ENST00000584991 C7orf69Q9H7B7 122 aa11.9□□□□□ -0.5
CDK5RAP3-236ENST00000584991 MINOS1-NBL1R4GNA1 71 aa11.9□□□□□ -0.5
CDK5RAP3-236ENST00000584991 PRRC2AP48634 2157 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-236ENST00000584991 MAP1AP78559 2803 aaPredicted RBP11.9□□□□□ -0.51
CDK5RAP3-236ENST00000584991 A0A1B0GV90 55 aa11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 CGB1A6NKQ9 187 aa11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 M0R143 59 aa11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 GPX1P07203 203 aa11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 DYNAPQ8N1N2 210 aa11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 SIGLECL1Q8N7X8 197 aa11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 RITA1Q96K30 269 aa11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 RBM14Q96PK6 669 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 RNASE7Q9H1E1 156 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 ZNF355PQ9NSJ1 428 aa11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.89□□□□□ -0.513e-7■■■□□ 15.6
CDK5RAP3-236ENST00000584991 IGHV3OR16-10A0A075B7F0 116 aa11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 ZNF705FA8MVS1 300 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 TIMM23O14925 209 aa11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 ZNF705DP0CH99 300 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 ZNF705BP0CI00 300 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 MYCNOSP40205 109 aa11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 USF2Q15853 346 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 TMEM183BQ1AE95 376 aa11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 Q6ZWC4 215 aa11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 NPIPB3Q92617 1050 aa11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 GRAMD2BQ96HH9 432 aa11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 SAMD10Q9BYL1 202 aa11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 FNDC4Q9H6D8 234 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 ZNF331Q9NQX6 463 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 MRPL27Q9P0M9 148 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 TBL2Q9Y4P3 447 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-236ENST00000584991 IGKV1D-37A0A075B6S9 117 aa11.88□□□□□ -0.51
CDK5RAP3-236ENST00000584991 E7EUB6 86 aa11.88□□□□□ -0.51
CDK5RAP3-236ENST00000584991 PEX7O00628 323 aa11.88□□□□□ -0.51
CDK5RAP3-236ENST00000584991 NPFFO15130 113 aa11.88□□□□□ -0.51
CDK5RAP3-236ENST00000584991 PLP1P60201 277 aa11.88□□□□□ -0.51
CDK5RAP3-236ENST00000584991 PATE2Q6UY27 113 aa11.88□□□□□ -0.51
CDK5RAP3-236ENST00000584991 ZNF329Q86UD4 541 aa11.88□□□□□ -0.51
CDK5RAP3-236ENST00000584991 TMEM116Q8NCL8 245 aa11.88□□□□□ -0.51
CDK5RAP3-236ENST00000584991 WFDC11Q8NEX6 87 aa11.88□□□□□ -0.51
CDK5RAP3-236ENST00000584991 FXYD5Q96DB9 178 aa11.88□□□□□ -0.51
CDK5RAP3-236ENST00000584991 HSPB9Q9BQS6 159 aa11.88□□□□□ -0.51
CDK5RAP3-236ENST00000584991 ZNF586Q9NXT0 402 aa11.88□□□□□ -0.51
CDK5RAP3-236ENST00000584991 KLF12Q9Y4X4 402 aa11.88□□□□□ -0.51
CDK5RAP3-236ENST00000584991 CSMD1Q96PZ7 3565 aa11.88□□□□□ -0.51
CDK5RAP3-236ENST00000584991 TRAV40A0A0B4J280 105 aa11.87□□□□□ -0.51
CDK5RAP3-236ENST00000584991 TGFAP01135 160 aa11.87□□□□□ -0.51
CDK5RAP3-236ENST00000584991 IGHV4-31P0DP07 118 aa11.87□□□□□ -0.51
CDK5RAP3-236ENST00000584991 HIST1H1EP10412 219 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-236ENST00000584991 MGST1P10620 155 aaKnown RBP11.87□□□□□ -0.51
CDK5RAP3-236ENST00000584991 GATA3P23771 443 aa11.87□□□□□ -0.51
CDK5RAP3-236ENST00000584991 SAA4P35542 130 aa11.87□□□□□ -0.51
CDK5RAP3-236ENST00000584991 ATP5L2Q7Z4Y8 100 aa11.87□□□□□ -0.51
CDK5RAP3-236ENST00000584991 PIP4P2Q8N4L2 257 aa11.87□□□□□ -0.51
CDK5RAP3-236ENST00000584991 CFHR4Q92496 578 aa11.87□□□□□ -0.51
CDK5RAP3-236ENST00000584991 RNF5Q99942 180 aa11.87□□□□□ -0.51
CDK5RAP3-236ENST00000584991 GNB4Q9HAV0 340 aa11.87□□□□□ -0.51
CDK5RAP3-236ENST00000584991 SVEP1Q4LDE5 3571 aa11.87□□□□□ -0.51
CDK5RAP3-236ENST00000584991 A0A1B0GUS0 222 aa11.87□□□□□ -0.51
CDK5RAP3-236ENST00000584991 RAB4AP20338 218 aa11.87□□□□□ -0.51
CDK5RAP3-236ENST00000584991 RUSC1-AS1Q66K80 236 aa11.87□□□□□ -0.51
CDK5RAP3-236ENST00000584991 CCDC144NLQ6NUI1 221 aa11.87□□□□□ -0.51
CDK5RAP3-236ENST00000584991 C19orf35Q6ZS72 473 aa11.87□□□□□ -0.51
CDK5RAP3-236ENST00000584991 AJUBAQ96IF1 538 aa11.87□□□□□ -0.51
CDK5RAP3-236ENST00000584991 KCNS1Q96KK3 526 aa11.87□□□□□ -0.51
CDK5RAP3-236ENST00000584991 IGHV1-69DA0A0B4J2H0 117 aa11.86□□□□□ -0.51
CDK5RAP3-236ENST00000584991 OOSP1A8MZH6 123 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms