RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 FOXE3Q13461 319 aa10.82□□□□□ -0.68
UBBP4-202ENST00000584755 KIAA0141Q14154 515 aaPredicted RBP10.82□□□□□ -0.68
UBBP4-202ENST00000584755 ZNF343Q6P1L6 599 aa10.82□□□□□ -0.68
UBBP4-202ENST00000584755 TEX38Q6PEX7 206 aa10.82□□□□□ -0.68
UBBP4-202ENST00000584755 Q6ZSV7 163 aa10.82□□□□□ -0.68
UBBP4-202ENST00000584755 ZNF329Q86UD4 541 aa10.82□□□□□ -0.68
UBBP4-202ENST00000584755 IQCF2Q8IXL9 164 aa10.82□□□□□ -0.68
UBBP4-202ENST00000584755 ZNF418Q8TF45 676 aaPredicted RBP10.82□□□□□ -0.68
UBBP4-202ENST00000584755 VAX2Q9UIW0 290 aa10.82□□□□□ -0.68
UBBP4-202ENST00000584755 ARL2-SNX15V9GYD0 113 aa10.82□□□□□ -0.68
UBBP4-202ENST00000584755 TRAV5A0A0B4J249 113 aa10.81□□□□□ -0.68
UBBP4-202ENST00000584755 SRP19P09132 144 aaKnown RBP10.81□□□□□ -0.68
UBBP4-202ENST00000584755 ADCYAP1P18509 176 aa10.81□□□□□ -0.68
UBBP4-202ENST00000584755 USF2Q15853 346 aaPredicted RBP10.81□□□□□ -0.68
UBBP4-202ENST00000584755 FAM209BQ5JX69 171 aa10.81□□□□□ -0.68
UBBP4-202ENST00000584755 STXBP6Q8NFX7 210 aa10.81□□□□□ -0.68
UBBP4-202ENST00000584755 OR5AU1Q8NGC0 362 aa10.81□□□□□ -0.68
UBBP4-202ENST00000584755 SHANK2-AS3Q9BTD1 123 aa10.81□□□□□ -0.68
UBBP4-202ENST00000584755 SLC25A39Q9BZJ4 359 aaPredicted RBP10.81□□□□□ -0.68
UBBP4-202ENST00000584755 SLC35B3Q9H1N7 401 aa10.81□□□□□ -0.68
UBBP4-202ENST00000584755 ZFAND3Q9H8U3 227 aa10.81□□□□□ -0.68
UBBP4-202ENST00000584755 TMEM167BQ9NRX6 74 aa10.81□□□□□ -0.68
UBBP4-202ENST00000584755 PUS1Q9Y606 427 aaKnown RBP eCLIP10.81□□□□□ -0.68
UBBP4-202ENST00000584755 NSD1Q96L73 2696 aaPredicted RBP10.81□□□□□ -0.68
UBBP4-202ENST00000584755 H3BRN7 92 aa10.81□□□□□ -0.68
UBBP4-202ENST00000584755 SFTA3P0C7M3 94 aa10.81□□□□□ -0.68
UBBP4-202ENST00000584755 C10orf99Q6UWK7 81 aa10.81□□□□□ -0.68
UBBP4-202ENST00000584755 LCNL1Q6ZST4 164 aa10.81□□□□□ -0.68
UBBP4-202ENST00000584755 RXFP4Q8TDU9 374 aa10.81□□□□□ -0.68
UBBP4-202ENST00000584755 NARS2Q96I59 477 aaKnown RBP10.81□□□□□ -0.68
UBBP4-202ENST00000584755 TXNDC17Q9BRA2 123 aa10.81□□□□□ -0.68
UBBP4-202ENST00000584755 SEC11CQ9BY50 192 aa10.81□□□□□ -0.68
UBBP4-202ENST00000584755 CARHSP1Q9Y2V2 147 aaKnown RBP10.81□□□□□ -0.68
UBBP4-202ENST00000584755 OR7C2O60412 319 aa10.8□□□□□ -0.68
UBBP4-202ENST00000584755 CD81P60033 236 aa10.8□□□□□ -0.68
UBBP4-202ENST00000584755 MEF2BQ02080 365 aaPredicted RBP10.8□□□□□ -0.68
UBBP4-202ENST00000584755 RELQ04864 619 aaPredicted RBP10.8□□□□□ -0.68
UBBP4-202ENST00000584755 TOMM20LQ6UXN7 152 aa10.8□□□□□ -0.68
UBBP4-202ENST00000584755 S100A7AQ86SG5 101 aa10.8□□□□□ -0.68
UBBP4-202ENST00000584755 OR51M1Q9H341 326 aa10.8□□□□□ -0.68
UBBP4-202ENST00000584755 TMEM14CQ9P0S9 112 aa10.8□□□□□ -0.68
UBBP4-202ENST00000584755 CUBNO60494 3623 aa10.79□□□□□ -0.68
UBBP4-202ENST00000584755 INAFM1C9JVW0 142 aa10.79□□□□□ -0.68
UBBP4-202ENST00000584755 PPP5D1E7EU14 171 aa10.79□□□□□ -0.68
UBBP4-202ENST00000584755 PAGE4O60829 102 aa10.79□□□□□ -0.68
UBBP4-202ENST00000584755 GP9P14770 177 aa10.79□□□□□ -0.68
UBBP4-202ENST00000584755 ARL3P36405 182 aa10.79□□□□□ -0.68
UBBP4-202ENST00000584755 OR4X2Q8NGF9 303 aa10.79□□□□□ -0.68
UBBP4-202ENST00000584755 WIPF2Q8TF74 440 aaPredicted RBP10.79□□□□□ -0.68
UBBP4-202ENST00000584755 FXYD5Q96DB9 178 aa10.79□□□□□ -0.68
UBBP4-202ENST00000584755 JMJD8Q96S16 334 aa10.79□□□□□ -0.68
UBBP4-202ENST00000584755 PAXXQ9BUH6 204 aa10.79□□□□□ -0.68
UBBP4-202ENST00000584755 C16orf95Q9H693 158 aa10.79□□□□□ -0.68
UBBP4-202ENST00000584755 FAM74A7A6NL05 159 aa10.78□□□□□ -0.68
UBBP4-202ENST00000584755 F8W036 122 aa10.78□□□□□ -0.68
UBBP4-202ENST00000584755 BMPR1BO00238 502 aa10.78□□□□□ -0.68
UBBP4-202ENST00000584755 TRBV12-3P01733 135 aa10.78□□□□□ -0.68
UBBP4-202ENST00000584755 IGHV3-11P01762 117 aa10.78□□□□□ -0.68
UBBP4-202ENST00000584755 GNB4Q9HAV0 340 aa10.78□□□□□ -0.68
UBBP4-202ENST00000584755 YTHDF2Q9Y5A9 579 aaKnown RBP10.78□□□□□ -0.68
UBBP4-202ENST00000584755 CLPSL1A2RUU4 121 aa10.77□□□□□ -0.69
UBBP4-202ENST00000584755 ZNF98A6NK75 572 aa10.77□□□□□ -0.69
UBBP4-202ENST00000584755 C11orf94C9JXX5 98 aa10.77□□□□□ -0.69
UBBP4-202ENST00000584755 TMEM250H0YL14 139 aa10.77□□□□□ -0.69
UBBP4-202ENST00000584755 MRPS12O15235 138 aaKnown RBP10.77□□□□□ -0.69
UBBP4-202ENST00000584755 RPLP1P05386 114 aaKnown RBP10.77□□□□□ -0.69
UBBP4-202ENST00000584755 PYYP10082 97 aa10.77□□□□□ -0.69
UBBP4-202ENST00000584755 UBE2L3P68036 154 aaKnown RBP10.77□□□□□ -0.69
UBBP4-202ENST00000584755 Q71RC1 249 aaPredicted RBP10.77□□□□□ -0.69
UBBP4-202ENST00000584755 CYB561D1Q8N8Q1 229 aa10.77□□□□□ -0.69
UBBP4-202ENST00000584755 UBE2E2Q96LR5 201 aa10.77□□□□□ -0.69
UBBP4-202ENST00000584755 RABAC1Q9UI14 185 aa10.77□□□□□ -0.69
UBBP4-202ENST00000584755 RNF24Q9Y225 148 aa10.77□□□□□ -0.69
UBBP4-202ENST00000584755 A0A1W2PRE2 83 aa10.76□□□□□ -0.69
UBBP4-202ENST00000584755 NDUFA4O00483 81 aa10.76□□□□□ -0.69
UBBP4-202ENST00000584755 OR10J4P0C629 311 aa10.76□□□□□ -0.69
UBBP4-202ENST00000584755 S100A7P31151 101 aa10.76□□□□□ -0.69
UBBP4-202ENST00000584755 UBE2G2P60604 165 aa10.76□□□□□ -0.69
UBBP4-202ENST00000584755 LEMD1Q68G75 181 aa10.76□□□□□ -0.69
UBBP4-202ENST00000584755 CCDC28AQ8IWP9 274 aa10.76□□□□□ -0.69
UBBP4-202ENST00000584755 KLHDC1Q8N7A1 406 aa10.76□□□□□ -0.69
UBBP4-202ENST00000584755 PEF1Q9UBV8 284 aaKnown RBP10.76□□□□□ -0.69
UBBP4-202ENST00000584755 IGHV3-35A0A0C4DH35 117 aa10.75□□□□□ -0.69
UBBP4-202ENST00000584755 PDE6DO43924 150 aa10.75□□□□□ -0.69
UBBP4-202ENST00000584755 GGCTO75223 188 aaKnown RBP10.75□□□□□ -0.69
UBBP4-202ENST00000584755 CRLF1O75462 422 aa10.75□□□□□ -0.69
UBBP4-202ENST00000584755 NDUFA7O95182 113 aa10.75□□□□□ -0.69
UBBP4-202ENST00000584755 CRYBA1P05813 215 aa10.75□□□□□ -0.69
UBBP4-202ENST00000584755 ATP5G3P48201 142 aa10.75□□□□□ -0.69
UBBP4-202ENST00000584755 SOHLH1Q5JUK2 328 aa10.75□□□□□ -0.69
UBBP4-202ENST00000584755 FAM90A2PQ658T7 463 aa10.75□□□□□ -0.69
UBBP4-202ENST00000584755 BPIFA4PQ86YQ2 179 aa10.75□□□□□ -0.69
UBBP4-202ENST00000584755 U3KQE9 123 aa10.75□□□□□ -0.69
UBBP4-202ENST00000584755 SETXQ7Z333 2677 aaKnown RBP10.75□□□□□ -0.69
UBBP4-202ENST00000584755 FN1P02751 2386 aaKnown RBP10.75□□□□□ -0.69
UBBP4-202ENST00000584755 F6UZH7 168 aa10.74□□□□□ -0.69
UBBP4-202ENST00000584755 LGALS1P09382 135 aaKnown RBP10.74□□□□□ -0.69
UBBP4-202ENST00000584755 NBEAP1P0C6P0 100 aa10.74□□□□□ -0.69
UBBP4-202ENST00000584755 IGLC2P0DOY2 106 aa10.74□□□□□ -0.69
UBBP4-202ENST00000584755 HIST1H1EP10412 219 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms