RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 ATP6V0E1O15342 81 aa8.17□□□□□ -1.1
RFFL-212ENST00000584655 CENPWQ5EE01 88 aa8.17□□□□□ -1.1
RFFL-212ENST00000584655 ST6GALNAC6Q969X2 333 aa8.17□□□□□ -1.1
RFFL-212ENST00000584655 TMEM68Q96MH6 324 aa8.17□□□□□ -1.1
RFFL-212ENST00000584655 ZNF469Q96JG9 3925 aaPredicted RBP8.17□□□□□ -1.1
RFFL-212ENST00000584655 TRBV20OR9-2A0A075B6H5 130 aa8.17□□□□□ -1.1
RFFL-212ENST00000584655 IGLC7A0M8Q6 106 aa8.17□□□□□ -1.1
RFFL-212ENST00000584655 HELTA6NFD8 242 aa8.17□□□□□ -1.1
RFFL-212ENST00000584655 GNG4P50150 75 aa8.17□□□□□ -1.1
RFFL-212ENST00000584655 DLX6P56179 175 aa8.17□□□□□ -1.1
RFFL-212ENST00000584655 ZNF506Q5JVG8 444 aa8.17□□□□□ -1.1
RFFL-212ENST00000584655 Q8TAT8 98 aa8.17□□□□□ -1.1
RFFL-212ENST00000584655 CMTM2Q8TAZ6 248 aa8.17□□□□□ -1.1
RFFL-212ENST00000584655 ARPC1AQ92747 370 aa8.17□□□□□ -1.1
RFFL-212ENST00000584655 CORO2AQ92828 525 aa8.17□□□□□ -1.1
RFFL-212ENST00000584655 PIMREGQ9BSJ6 248 aa8.17□□□□□ -1.1
RFFL-212ENST00000584655 MBP02144 154 aa8.16□□□□□ -1.1
RFFL-212ENST00000584655 HOXA5P20719 270 aa8.16□□□□□ -1.1
RFFL-212ENST00000584655 IER3P46695 156 aa8.16□□□□□ -1.1
RFFL-212ENST00000584655 UBE2G1P62253 170 aa8.16□□□□□ -1.1
RFFL-212ENST00000584655 RPL19P84098 196 aaKnown RBP8.16□□□□□ -1.1
RFFL-212ENST00000584655 AGRNO00468 2067 aa8.16□□□□□ -1.1
RFFL-212ENST00000584655 BAHCC1Q9P281 2608 aa8.16□□□□□ -1.1
RFFL-212ENST00000584655 C15orf32Q32M92 178 aa8.16□□□□□ -1.1
RFFL-212ENST00000584655 TBX15Q96SF7 602 aa8.16□□□□□ -1.1
RFFL-212ENST00000584655 SSBP4Q9BWG4 385 aaPredicted RBP8.16□□□□□ -1.1
RFFL-212ENST00000584655 AMMECR1Q9Y4X0 333 aaPredicted RBP8.16□□□□□ -1.1
RFFL-212ENST00000584655 HYPMO75409 117 aa8.16□□□□□ -1.1
RFFL-212ENST00000584655 CXorf1O96002 111 aa8.16□□□□□ -1.1
RFFL-212ENST00000584655 IGHV2-5P01817 119 aa8.16□□□□□ -1.1
RFFL-212ENST00000584655 HOXB4P17483 251 aaPredicted RBP8.16□□□□□ -1.1
RFFL-212ENST00000584655 TOMM20LQ6UXN7 152 aa8.16□□□□□ -1.1
RFFL-212ENST00000584655 TMEM144Q7Z5S9 345 aa8.16□□□□□ -1.1
RFFL-212ENST00000584655 TMEM167AQ8TBQ9 72 aa8.16□□□□□ -1.1
RFFL-212ENST00000584655 BET1LQ9NYM9 111 aa8.16□□□□□ -1.1
RFFL-212ENST00000584655 PAM16Q9Y3D7 125 aa8.16□□□□□ -1.1
RFFL-212ENST00000584655 CORTO00230 105 aa8.15□□□□□ -1.1
RFFL-212ENST00000584655 CSN3P07498 182 aa8.15□□□□□ -1.1
RFFL-212ENST00000584655 PRTN3P24158 256 aa8.15□□□□□ -1.1
RFFL-212ENST00000584655 RHOGP84095 191 aa8.15□□□□□ -1.1
RFFL-212ENST00000584655 OR2T10Q8NGZ9 312 aa8.15□□□□□ -1.1
RFFL-212ENST00000584655 SRD5A3Q9H8P0 318 aa8.15□□□□□ -1.1
RFFL-212ENST00000584655 TECRQ9NZ01 308 aaKnown RBP8.15□□□□□ -1.1
RFFL-212ENST00000584655 KLF2Q9Y5W3 355 aaPredicted RBP8.15□□□□□ -1.1
RFFL-212ENST00000584655 ZNF785A8K8V0 405 aa8.15□□□□□ -1.1
RFFL-212ENST00000584655 GGTLC3B5MD39 225 aa8.15□□□□□ -1.1
RFFL-212ENST00000584655 TCAPO15273 167 aa8.15□□□□□ -1.1
RFFL-212ENST00000584655 LGALS7P47929 136 aa8.15□□□□□ -1.1
RFFL-212ENST00000584655 LMO4P61968 165 aa8.15□□□□□ -1.1
RFFL-212ENST00000584655 C5orf64Q2M2E5 130 aa8.15□□□□□ -1.1
RFFL-212ENST00000584655 TMEM177Q53S58 311 aa8.15□□□□□ -1.1
RFFL-212ENST00000584655 RNF182Q8N6D2 247 aa8.15□□□□□ -1.1
RFFL-212ENST00000584655 NAGKQ9UJ70 344 aa8.15□□□□□ -1.1
RFFL-212ENST00000584655 DMRT1Q9Y5R6 373 aa8.15□□□□□ -1.1
RFFL-212ENST00000584655 ISLRO14498 428 aa8.15□□□□□ -1.11
RFFL-212ENST00000584655 FAM106CPP0CH98 169 aa8.15□□□□□ -1.11
RFFL-212ENST00000584655 NTF3P20783 257 aa8.15□□□□□ -1.11
RFFL-212ENST00000584655 BAGE3Q86Y29 109 aa8.15□□□□□ -1.11
RFFL-212ENST00000584655 BAGE2Q86Y30 109 aa8.15□□□□□ -1.11
RFFL-212ENST00000584655 PSMG3Q9BT73 122 aaPredicted RBP8.15□□□□□ -1.11
RFFL-212ENST00000584655 CHRDL1Q9BU40 450 aa8.15□□□□□ -1.11
RFFL-212ENST00000584655 TIMM9Q9Y5J7 89 aa8.15□□□□□ -1.11
RFFL-212ENST00000584655 STAB1Q9NY15 2570 aa8.15□□□□□ -1.11
RFFL-212ENST00000584655 CENPVL3A0A0U1RRI6 287 aa8.14□□□□□ -1.11
RFFL-212ENST00000584655 GGCTO75223 188 aaKnown RBP8.14□□□□□ -1.11
RFFL-212ENST00000584655 C8orf88P0DMB2 117 aa8.14□□□□□ -1.11
RFFL-212ENST00000584655 COMPP49747 757 aaPredicted RBP8.14□□□□□ -1.11
RFFL-212ENST00000584655 PATE2Q6UY27 113 aa8.14□□□□□ -1.11
RFFL-212ENST00000584655 OTOGQ6ZRI0 2925 aa8.14□□□□□ -1.11
RFFL-212ENST00000584655 NPFFO15130 113 aa8.14□□□□□ -1.11
RFFL-212ENST00000584655 IGHV4-59P01825 116 aa8.14□□□□□ -1.11
RFFL-212ENST00000584655 TPPP2P59282 170 aa8.14□□□□□ -1.11
RFFL-212ENST00000584655 C10orf91Q5T1B1 145 aa8.14□□□□□ -1.11
RFFL-212ENST00000584655 C11orf71Q6IPW1 123 aa8.14□□□□□ -1.11
RFFL-212ENST00000584655 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.14□□□□□ -1.11
RFFL-212ENST00000584655 SLC45A2Q9UMX9 530 aa8.14□□□□□ -1.11
RFFL-212ENST00000584655 CIARTQ8N365 385 aaPredicted RBP8.14□□□□□ -1.11
RFFL-212ENST00000584655 C14orf144Q96I85 54 aa8.14□□□□□ -1.11
RFFL-212ENST00000584655 Q96MF0 132 aa8.14□□□□□ -1.11
RFFL-212ENST00000584655 KLK15Q9H2R5 256 aa8.14□□□□□ -1.11
RFFL-212ENST00000584655 KAAG1Q9UBP8 84 aa8.14□□□□□ -1.11
RFFL-212ENST00000584655 NAT8Q9UHE5 227 aa8.14□□□□□ -1.11
RFFL-212ENST00000584655 TRBV12-3P01733 135 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 TRGV3P03979 118 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 NBEAP1P0C6P0 100 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 ZNF25P17030 456 aaPredicted RBP8.13□□□□□ -1.11
RFFL-212ENST00000584655 FOXA3P55318 350 aaPredicted RBP8.13□□□□□ -1.11
RFFL-212ENST00000584655 KRTDAPP60985 99 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 TCF24Q7RTU0 167 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 SMR3AQ99954 134 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 SDF2L1Q9HCN8 221 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 BRS3P32247 399 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 OR2D3Q8NGH3 330 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 OR52E5Q8NH55 327 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 OR5R1Q8NH85 324 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 COL6A5A8TX70 2615 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 TAS2R45P59539 299 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 DEFB136Q30KP8 78 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 TMEM75Q8N9X5 138 aa8.13□□□□□ -1.11
RFFL-212ENST00000584655 HIST1H2BLQ99880 126 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 152.3 ms