RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	FAM162B	Q5T6X4	162 aa		9.42	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063		Q8IYB0	196 aa		9.42	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	C8orf31	Q8N9H6	132 aa		9.42	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	VN1R17P	Q8TDU5	208 aa		9.42	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	IGKV1D-17	A0A075B6S4	117 aa		9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	RPL31	P62899	125 aa	Known RBP	9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	RPEL1	Q2QD12	228 aa		9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	ZNF718	Q3SXZ3	478 aa		9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	CD300E	Q496F6	205 aa	Predicted RBP	9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	TIMM9	Q9Y5J7	89 aa		9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	SLC25A15	Q9Y619	301 aa		9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	DSCAM	O60469	2012 aa		9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063		A0A1W2PPI3	338 aa		9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	FAM90A26	D6RGX4	464 aa		9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	SPRY3	O43610	288 aa		9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	GRN	P28799	593 aa	Known RBP	9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	RPL15	P61313	204 aa	Known RBP	9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	CXXC4	Q9H2H0	198 aa		9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	RNF114	Q9Y508	228 aa		9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	SPG11	Q96JI7	2443 aa		9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	CFAP46	Q8IYW2	2715 aa		9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	GAGE10	A6NGK3	116 aa		9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	SERF1A	O75920	110 aa		9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	CA1	P00915	261 aa	Predicted RBP	9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	GNG5	P63218	68 aa		9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	ADAMTSL5	Q6ZMM2	481 aa		9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	C8orf46	Q8TAG6	207 aa		9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	HSPB9	Q9BQS6	159 aa		9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	RNASE7	Q9H1E1	156 aa	Known RBP	9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	SERTAD4	Q9NUC0	356 aa		9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	WDR83OS	Q9Y284	106 aa		9.41	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	CENPE	Q02224	2701 aa		9.4	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	DYSF	O75923	2080 aa		9.4	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	C15orf65	H3BRN8	121 aa		9.4	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	DUT	P33316	252 aa	Known RBP	9.4	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	ZCCHC24	Q8N2G6	241 aa	Known RBP	9.4	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	ACY3	Q96HD9	319 aa		9.4	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	SFXN3	Q9BWM7	321 aa		9.4	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	GGTLC1	Q9BX51	225 aa		9.4	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	TP53TG3	Q9ULZ0	132 aa		9.4	□□□□□ -0.9
CDK5RAP3-231	ENST00000584063	FABP5P3	A8MUU1	101 aa		9.4	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	9.4	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	FCN1	O00602	326 aa		9.4	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	SPINT2	O43291	252 aa		9.4	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	IGFBP2	P18065	325 aa		9.4	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	NPY1R	P25929	384 aa		9.4	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	SLC35E4	Q6ICL7	350 aa		9.4	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063		Q6ZWC4	215 aa		9.4	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	BAGE3	Q86Y29	109 aa		9.4	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	BAGE2	Q86Y30	109 aa		9.4	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	OR10G8	Q8NGN5	311 aa		9.4	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	CMTM2	Q8TAZ6	248 aa		9.4	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	SGK494	Q96LW2	274 aa		9.4	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	HSD17B10	Q99714	261 aa	Known RBP	9.4	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	TCTA	P57738	103 aa		9.39	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	LINC01620	Q4KN68	170 aa		9.39	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	MIR17HG	Q75NE6	70 aa		9.39	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	GRAMD2B	Q96HH9	432 aa		9.39	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	DNAJC30	Q96LL9	226 aa		9.39	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	C16orf97	H3BN30	126 aa		9.39	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063		M0R2Z0	102 aa		9.39	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	CRYBB3	P26998	211 aa		9.39	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	SRP14	P37108	136 aa	Known RBP	9.39	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	KRTDAP	P60985	99 aa		9.39	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	ATOH7	Q8N100	152 aa		9.39	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	GCSAM	Q8N6F7	178 aa		9.39	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	RND1	Q92730	232 aa		9.39	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	SAMD10	Q9BYL1	202 aa		9.39	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	MRPL18	Q9H0U6	180 aa	Known RBP	9.39	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	DCHS2	Q6V1P9	2916 aa		9.38	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	SNURFL	B1AK76	121 aa		9.38	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	LINC00310	P59036	64 aa		9.38	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	AMMECR1L	Q6DCA0	310 aa		9.38	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	MRPL54	Q6P161	138 aa	Known RBP	9.38	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	STPG3	Q8N7X2	389 aa		9.38	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	OR13C6P	Q8NH95	151 aa		9.38	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	LINC00479	Q96M42	142 aa		9.38	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	HSBP1	O75506	76 aa		9.38	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	REG1A	P05451	166 aa		9.38	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	MGST1	P10620	155 aa	Known RBP	9.38	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	MAL	P21145	153 aa		9.38	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	COA6	Q5JTJ3	125 aa	Known RBP	9.38	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	OR5AN1	Q8NGI8	311 aa		9.38	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	SSBP3	Q9BWW4	388 aa	Predicted RBP	9.38	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	FLNC	Q14315	2725 aa		9.38	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	LOC107984640	A0A0U1RRK4	108 aa		9.37	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	OR4C46	A6NHA9	309 aa		9.37	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	CRISP2	P16562	243 aa		9.37	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	PQLC2	Q6ZP29	291 aa		9.37	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	FAM19A2	Q8N3H0	131 aa		9.37	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	ITLN1	Q8WWA0	313 aa		9.37	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	MRPL53	Q96EL3	112 aa	Known RBP	9.37	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	S1PR3	Q99500	378 aa		9.37	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	TMEM189	A5PLL7	270 aa		9.37	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	CA2	P00918	260 aa		9.37	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	IGLV1-44	P01699	117 aa		9.37	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	GCHFR	P30047	84 aa		9.37	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	ERVK-16	P61578	105 aa		9.37	□□□□□ -0.91
CDK5RAP3-231	ENST00000584063	MRPL27	Q9P0M9	148 aa	Known RBP	9.37	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms