RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	SEPSECS	Q9HD40	501 aa	Known RBP	3.33	□□□□□ -1.88
MSI2-216	ENST00000582772	LYRM2	Q9NU23	88 aa	Predicted RBP	3.33	□□□□□ -1.88
MSI2-216	ENST00000582772	COA4	Q9NYJ1	87 aa		3.33	□□□□□ -1.88
MSI2-216	ENST00000582772	PEF1	Q9UBV8	284 aa	Known RBP	3.33	□□□□□ -1.88
MSI2-216	ENST00000582772	STRAP	Q9Y3F4	350 aa	Known RBP	3.33	□□□□□ -1.88
MSI2-216	ENST00000582772	OR2W1	Q9Y3N9	320 aa		3.33	□□□□□ -1.88
MSI2-216	ENST00000582772	MPC1	Q9Y5U8	109 aa		3.33	□□□□□ -1.88
MSI2-216	ENST00000582772	DUXB	A0A1W2PPF3	345 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	C7orf77	A4D0Y5	90 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772		H3BUA1	57 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772		H7C2Y5	167 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	TXNL1	O43396	289 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	CA1	P00915	261 aa	Predicted RBP	3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	SRP19	P09132	144 aa	Known RBP	3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	CTXN2	P0C2S0	81 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	OR13C7	P0DN81	318 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	IAPP	P10997	89 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	ZNF44	P15621	663 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	BRWD1-AS2	P59051	145 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	RPL30	P62888	115 aa	Known RBP	3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	GNMT	Q14749	295 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	ZNF726P1	Q15940	193 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	SSX7	Q7RTT5	188 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	NFE4	Q86UQ8	179 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	KRTAP19-1	Q8IUB9	90 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	OR2G3	Q8NGZ4	309 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	OR51H1	Q8NH63	302 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	OR1L1	Q8NH94	360 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	SPIN2A	Q99865	258 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	SPIN2B	Q9BPZ2	258 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	C20orf24	Q9BUV8	137 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	RTL8A	Q9BWD3	113 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	RIMS4	Q9H426	269 aa	Predicted RBP	3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	SMCO4	Q9NRQ5	59 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	ZNF586	Q9NXT0	402 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772	MLX	Q9UH92	298 aa		3.32	□□□□□ -1.88
MSI2-216	ENST00000582772		A0A1B0GU03	582 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	LOC102723971	A0A1B0GUV8	181 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	RBFOX3	A6NFN3	312 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	ZNF727	A8MUV8	499 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	UMAD1	C9J7I0	102 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772		H3BP45	60 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	WRB	O00258	174 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	ZNF737	O75373	536 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	EIF3G	O75821	320 aa	Known RBP eCLIP	3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	MOS	P00540	346 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	PRH1	P02810	166 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	SLC25A6	P12236	298 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	CBLN1	P23435	193 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	CD1B	P29016	333 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	PRDX2	P32119	198 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	MAS1L	P35410	378 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	RPL35	P42766	123 aa	Known RBP	3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	HOXA1	P49639	335 aa	Predicted RBP	3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	RAB5C	P51148	216 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	TAS2R30	P59541	319 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	VAMP2	P63027	116 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	DIAPH2-AS1	Q14236	149 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	ZNF146	Q15072	292 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	SMIM21	Q3B7S5	101 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	TMEM41B	Q5BJD5	291 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	ZNF506	Q5JVG8	444 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	C15orf54	Q8N8G6	183 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	OR52L2P	Q8NGH6	319 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	OR5C1	Q8NGR4	320 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	OR9G1	Q8NH87	305 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	OR10J5	Q8NHC4	309 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	CIRBP-AS1	Q8TBR5	109 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	IL1F10	Q8WWZ1	152 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	LSM10	Q969L4	123 aa	Known RBP	3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	ISOC2	Q96AB3	205 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	COQ2	Q96H96	371 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	ATP5S	Q99766	215 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	RSG1	Q9BU20	258 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	EIF5A2	Q9GZV4	153 aa	Known RBP	3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	SLC25A31	Q9H0C2	315 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	SLC35B3	Q9H1N7	401 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	VSIR	Q9H7M9	311 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	HES4	Q9HCC6	221 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	RPS10P5	Q9NQ39	176 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	RNF150	Q9ULK6	438 aa		3.31	□□□□□ -1.88
MSI2-216	ENST00000582772	TRAV3	A0A0B4J244	114 aa		3.3	□□□□□ -1.88
MSI2-216	ENST00000582772	IGHV1-3	A0A0C4DH29	117 aa		3.3	□□□□□ -1.88
MSI2-216	ENST00000582772	TEX48	A0A1B0GUV7	120 aa		3.3	□□□□□ -1.88
MSI2-216	ENST00000582772	ZNF98	A6NK75	572 aa		3.3	□□□□□ -1.88
MSI2-216	ENST00000582772		A8MWP6	167 aa		3.3	□□□□□ -1.88
MSI2-216	ENST00000582772		M0R036	132 aa		3.3	□□□□□ -1.88
MSI2-216	ENST00000582772	SH2D1B	O14796	132 aa		3.3	□□□□□ -1.88
MSI2-216	ENST00000582772	SYNGR2	O43760	224 aa		3.3	□□□□□ -1.88
MSI2-216	ENST00000582772	NXPH2	O95156	264 aa		3.3	□□□□□ -1.88
MSI2-216	ENST00000582772	TRBV12-3	P01733	135 aa		3.3	□□□□□ -1.88
MSI2-216	ENST00000582772	HBZ	P02008	142 aa		3.3	□□□□□ -1.88
MSI2-216	ENST00000582772	TRGV3	P03979	118 aa		3.3	□□□□□ -1.88
MSI2-216	ENST00000582772	SERPINE2	P07093	398 aa		3.3	□□□□□ -1.88
MSI2-216	ENST00000582772	METTL15P1	P0C7V9	234 aa		3.3	□□□□□ -1.88
MSI2-216	ENST00000582772	HOXA5	P20719	270 aa		3.3	□□□□□ -1.88
MSI2-216	ENST00000582772	EDN2	P20800	178 aa		3.3	□□□□□ -1.88
MSI2-216	ENST00000582772	CEACAM6	P40199	344 aa		3.3	□□□□□ -1.88
MSI2-216	ENST00000582772	OR3A1	P47881	315 aa		3.3	□□□□□ -1.88
MSI2-216	ENST00000582772	SULT1A1	P50225	295 aa		3.3	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms