RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 RHOBP62745 196 aa7.97□□□□□ -1.13
SS18-221ENST00000582448 ACSM6Q6P461 480 aa7.97□□□□□ -1.13
SS18-221ENST00000582448 IQCF2Q8IXL9 164 aa7.97□□□□□ -1.13
SS18-221ENST00000582448 OR4F17Q8NGA8 305 aa7.97□□□□□ -1.13
SS18-221ENST00000582448 OR4F4Q96R69 305 aa7.97□□□□□ -1.13
SS18-221ENST00000582448 RNF2Q99496 336 aa7.97□□□□□ -1.13
SS18-221ENST00000582448 SLC25A33Q9BSK2 321 aa7.97□□□□□ -1.13
SS18-221ENST00000582448 KRTAP17-1Q9BYP8 105 aa7.97□□□□□ -1.13
SS18-221ENST00000582448 F8W036 122 aa7.96□□□□□ -1.14
SS18-221ENST00000582448 K7EIL1 84 aa7.96□□□□□ -1.14
SS18-221ENST00000582448 OR10J1P30954 320 aa7.96□□□□□ -1.14
SS18-221ENST00000582448 RND2P52198 227 aa7.96□□□□□ -1.14
SS18-221ENST00000582448 MIC13Q5XKP0 118 aa7.96□□□□□ -1.14
SS18-221ENST00000582448 PVRIGQ6DKI7 326 aa7.96□□□□□ -1.14
SS18-221ENST00000582448 CYP2G1PQ6ZSU1 146 aa7.96□□□□□ -1.14
SS18-221ENST00000582448 C16orf82Q7Z2V1 217 aa7.96□□□□□ -1.14
SS18-221ENST00000582448 CCDC28AQ8IWP9 274 aa7.96□□□□□ -1.14
SS18-221ENST00000582448 RPP25LQ8N5L8 163 aaKnown RBP7.96□□□□□ -1.14
SS18-221ENST00000582448 Q8N9W7 124 aa7.96□□□□□ -1.14
SS18-221ENST00000582448 OR1L4Q8NGR5 311 aa7.96□□□□□ -1.14
SS18-221ENST00000582448 NPIPB3Q92617 1050 aa7.96□□□□□ -1.14
SS18-221ENST00000582448 RBM14Q96PK6 669 aaKnown RBP7.96□□□□□ -1.14
SS18-221ENST00000582448 PFDN5Q99471 154 aa7.96□□□□□ -1.14
SS18-221ENST00000582448 CITED2Q99967 270 aaPredicted RBP7.96□□□□□ -1.14
SS18-221ENST00000582448 NPFFR1Q9GZQ6 430 aa7.96□□□□□ -1.14
SS18-221ENST00000582448 VSIRQ9H7M9 311 aa7.96□□□□□ -1.14
SS18-221ENST00000582448 SLC25A22Q9H936 323 aa7.96□□□□□ -1.14
SS18-221ENST00000582448 FAM30AQ9NZY2 134 aa7.96□□□□□ -1.14
SS18-221ENST00000582448 GNG13Q9P2W3 67 aa7.96□□□□□ -1.14
SS18-221ENST00000582448 SLC45A2Q9UMX9 530 aa7.96□□□□□ -1.14
SS18-221ENST00000582448 NOTCH3Q9UM47 2321 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 TCRBV4S1A1TA0A5B7 111 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 SEC14L6B5MCN3 397 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 APOC3P02656 99 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 CD5P06127 495 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 CRYGCP07315 174 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 SFTA3P0C7M3 94 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 CTRB1P17538 263 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 GCSHP23434 173 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 NPBWR1P48145 328 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 PSMB3P49720 205 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 TAS2R45P59539 299 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 DEFA5Q01523 94 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 HAGHQ16775 308 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 CTRB2Q6GPI1 263 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 S100A7AQ86SG5 101 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 NDUFA11Q86Y39 141 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 TTC9CQ8N5M4 171 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 THAP8Q8NA92 274 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 LINC00476Q8WZB0 136 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 RAB24Q969Q5 203 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 LINC00052Q96N35 136 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 FAM103A1Q9BTL3 118 aaKnown RBP7.95□□□□□ -1.14
SS18-221ENST00000582448 SEC11CQ9BY50 192 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 SLC35B3Q9H1N7 401 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 TMEM231Q9H6L2 316 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 MANBALQ9NQG1 85 aa7.95□□□□□ -1.14
SS18-221ENST00000582448 TRAV30A0A087WSZ9 112 aa7.94□□□□□ -1.14
SS18-221ENST00000582448 IGHV7-81A0A0B4J1V7 117 aa7.94□□□□□ -1.14
SS18-221ENST00000582448 COX7A2P2O60397 106 aa7.94□□□□□ -1.14
SS18-221ENST00000582448 CXorf1O96002 111 aa7.94□□□□□ -1.14
SS18-221ENST00000582448 EGR2P11161 476 aaPredicted RBP7.94□□□□□ -1.14
SS18-221ENST00000582448 FGF8P55075 233 aaPredicted RBP7.94□□□□□ -1.14
SS18-221ENST00000582448 SSBP2P81877 361 aaPredicted RBP7.94□□□□□ -1.14
SS18-221ENST00000582448 PMS2P11Q13670 270 aa7.94□□□□□ -1.14
SS18-221ENST00000582448 ZNF726P1Q15940 193 aa7.94□□□□□ -1.14
SS18-221ENST00000582448 KHDC3LQ587J8 217 aa7.94□□□□□ -1.14
SS18-221ENST00000582448 SPSB3Q6PJ21 355 aa7.94□□□□□ -1.14
SS18-221ENST00000582448 UNQ5815/PRO19632Q6UWF5 114 aa7.94□□□□□ -1.14
SS18-221ENST00000582448 SLC35E3Q7Z769 313 aa7.94□□□□□ -1.14
SS18-221ENST00000582448 SVBPQ8N300 66 aa7.94□□□□□ -1.14
SS18-221ENST00000582448 C5orf56Q8N8D9 126 aa7.94□□□□□ -1.14
SS18-221ENST00000582448 TMEM116Q8NCL8 245 aa7.94□□□□□ -1.14
SS18-221ENST00000582448 TRGV9Q99603 122 aa7.94□□□□□ -1.14
SS18-221ENST00000582448 MRPL32Q9BYC8 188 aaKnown RBP7.94□□□□□ -1.14
SS18-221ENST00000582448 FNDC4Q9H6D8 234 aaPredicted RBP7.94□□□□□ -1.14
SS18-221ENST00000582448 ZNF702PQ9H963 129 aa7.94□□□□□ -1.14
SS18-221ENST00000582448 WI2-2373I1.2A0A1W2PRP0 233 aa7.93□□□□□ -1.14
SS18-221ENST00000582448 YIF1AO95070 293 aa7.93□□□□□ -1.14
SS18-221ENST00000582448 HSPB1P04792 205 aaKnown RBP7.93□□□□□ -1.14
SS18-221ENST00000582448 LINC00869P0C866 280 aa7.93□□□□□ -1.14
SS18-221ENST00000582448 BCL2P10415 239 aa7.93□□□□□ -1.14
SS18-221ENST00000582448 PF4V1P10720 104 aa7.93□□□□□ -1.14
SS18-221ENST00000582448 CCL20P78556 96 aa7.93□□□□□ -1.14
SS18-221ENST00000582448 FOXI1Q12951 378 aa7.93□□□□□ -1.14
SS18-221ENST00000582448 ECSCRQ19T08 205 aa7.93□□□□□ -1.14
SS18-221ENST00000582448 C9orf152Q5JTZ5 239 aa7.93□□□□□ -1.14
SS18-221ENST00000582448 ZNF506Q5JVG8 444 aa7.93□□□□□ -1.14
SS18-221ENST00000582448 FAM78BQ5VT40 261 aa7.93□□□□□ -1.14
SS18-221ENST00000582448 TMEM219Q86XT9 240 aa7.93□□□□□ -1.14
SS18-221ENST00000582448 OR4X1Q8NH49 305 aa7.93□□□□□ -1.14
SS18-221ENST00000582448 RXFP4Q8TDU9 374 aa7.93□□□□□ -1.14
SS18-221ENST00000582448 GATAD1Q8WUU5 269 aa7.93□□□□□ -1.14
SS18-221ENST00000582448 ZNF355PQ9NSJ1 428 aa7.93□□□□□ -1.14
SS18-221ENST00000582448 SERTAD4Q9NUC0 356 aa7.93□□□□□ -1.14
SS18-221ENST00000582448 GAR1Q9NY12 217 aaKnown RBP7.93□□□□□ -1.14
SS18-221ENST00000582448 TECRQ9NZ01 308 aaKnown RBP7.93□□□□□ -1.14
SS18-221ENST00000582448 VAX2Q9UIW0 290 aa7.93□□□□□ -1.14
SS18-221ENST00000582448 FUT9Q9Y231 359 aa7.93□□□□□ -1.14
SS18-221ENST00000582448 RYR3Q15413 4870 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 327.9 ms