RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 KIR2DL5BA0A0G2JPC4 375 aa14.79□□□□□ -0.04
SS18-218ENST00000581021 CST7O76096 145 aa14.79□□□□□ -0.04
SS18-218ENST00000581021 CAV2P51636 162 aa14.79□□□□□ -0.04
SS18-218ENST00000581021 APOC4P55056 127 aa14.79□□□□□ -0.04
SS18-218ENST00000581021 H2BFSP57053 126 aa14.79□□□□□ -0.04
SS18-218ENST00000581021 KIR2DL5AQ8N109 375 aa14.79□□□□□ -0.04
SS18-218ENST00000581021 BPIFCQ8NFQ6 507 aa14.79□□□□□ -0.04
SS18-218ENST00000581021 KIR2DL5BQ8NHK3 375 aa14.79□□□□□ -0.04
SS18-218ENST00000581021 DOK5Q9P104 306 aa14.79□□□□□ -0.04
SS18-218ENST00000581021 KNCNA6PVL3 124 aa14.78□□□□□ -0.04
SS18-218ENST00000581021 DEDDO75618 318 aa14.78□□□□□ -0.04
SS18-218ENST00000581021 ORM2P19652 201 aa14.78□□□□□ -0.04
SS18-218ENST00000581021 NUP62P37198 522 aaPredicted RBP14.78□□□□□ -0.04
SS18-218ENST00000581021 BCAP31P51572 246 aa14.78□□□□□ -0.04
SS18-218ENST00000581021 MUC7Q8TAX7 377 aa14.78□□□□□ -0.04
SS18-218ENST00000581021 SLC25A32Q9H2D1 315 aa14.78□□□□□ -0.04
SS18-218ENST00000581021 LYRM2Q9NU23 88 aaPredicted RBP14.78□□□□□ -0.04
SS18-218ENST00000581021 MGAT4CQ9UBM8 478 aa14.78□□□□□ -0.04
SS18-218ENST00000581021 AGRNO00468 2067 aa14.77□□□□□ -0.04
SS18-218ENST00000581021 SOCS3O14543 225 aa14.77□□□□□ -0.05
SS18-218ENST00000581021 CFDP00746 253 aaPredicted RBP14.77□□□□□ -0.05
SS18-218ENST00000581021 AP2S1P53680 142 aaPredicted RBP14.77□□□□□ -0.05
SS18-218ENST00000581021 PSMG4Q5JS54 123 aa14.77□□□□□ -0.05
SS18-218ENST00000581021 C1orf194Q5T5A4 169 aa14.77□□□□□ -0.05
SS18-218ENST00000581021 Q6ZWC4 215 aa14.77□□□□□ -0.05
SS18-218ENST00000581021 TMEM217Q8N7C4 229 aa14.77□□□□□ -0.05
SS18-218ENST00000581021 OR1B1Q8NGR6 318 aa14.77□□□□□ -0.05
SS18-218ENST00000581021 MGST2Q99735 147 aa14.77□□□□□ -0.05
SS18-218ENST00000581021 GGACTQ9BVM4 153 aa14.77□□□□□ -0.05
SS18-218ENST00000581021 SCRT1Q9BWW7 348 aa14.77□□□□□ -0.05
SS18-218ENST00000581021 NPVFQ9HCQ7 196 aa14.77□□□□□ -0.05
SS18-218ENST00000581021 ZNF98A6NK75 572 aa14.76□□□□□ -0.05
SS18-218ENST00000581021 H0YIZ8 118 aa14.76□□□□□ -0.05
SS18-218ENST00000581021 GIG44P09565 113 aaPredicted RBP14.76□□□□□ -0.05
SS18-218ENST00000581021 LINC00869P0C866 280 aa14.76□□□□□ -0.05
SS18-218ENST00000581021 TRPT1Q86TN4 253 aaKnown RBP14.76□□□□□ -0.05
SS18-218ENST00000581021 TMEM252Q8N6L7 170 aa14.76□□□□□ -0.05
SS18-218ENST00000581021 PPP1R14BQ96C90 147 aa14.76□□□□□ -0.05
SS18-218ENST00000581021 OR5AC2Q9NZP5 309 aa14.76□□□□□ -0.05
SS18-218ENST00000581021 SLC45A2Q9UMX9 530 aa14.76□□□□□ -0.05
SS18-218ENST00000581021 UBE2CO00762 179 aa14.75□□□□□ -0.05
SS18-218ENST00000581021 DEFB1P60022 68 aa14.75□□□□□ -0.05
SS18-218ENST00000581021 PLP1P60201 277 aa14.75□□□□□ -0.05
SS18-218ENST00000581021 TEPPQ6URK8 271 aa14.75□□□□□ -0.05
SS18-218ENST00000581021 PATE2Q6UY27 113 aa14.75□□□□□ -0.05
SS18-218ENST00000581021 RNF183Q96D59 192 aa14.75□□□□□ -0.05
SS18-218ENST00000581021 NMES1Q9C002 83 aa14.75□□□□□ -0.05
SS18-218ENST00000581021 CSTL1Q9H114 145 aa14.75□□□□□ -0.05
SS18-218ENST00000581021 SLC25A22Q9H936 323 aa14.75□□□□□ -0.05
SS18-218ENST00000581021 H3BRN7 92 aa14.74□□□□□ -0.05
SS18-218ENST00000581021 AGPAT2O15120 278 aa14.74□□□□□ -0.05
SS18-218ENST00000581021 SPRY2O43597 315 aa14.74□□□□□ -0.05
SS18-218ENST00000581021 PVALBP20472 110 aaPredicted RBP14.74□□□□□ -0.05
SS18-218ENST00000581021 SULT1A1P50225 295 aa14.74□□□□□ -0.05
SS18-218ENST00000581021 VWC2Q2TAL6 325 aa14.74□□□□□ -0.05
SS18-218ENST00000581021 LRRC37A5PQ49AS3 106 aa14.74□□□□□ -0.05
SS18-218ENST00000581021 ACTL10Q5JWF8 245 aa14.74□□□□□ -0.05
SS18-218ENST00000581021 OR8I2Q8N0Y5 310 aa14.74□□□□□ -0.05
SS18-218ENST00000581021 UHRF2Q96PU4 802 aa14.74□□□□□ -0.05
SS18-218ENST00000581021 TMEM147Q9BVK8 224 aa14.74□□□□□ -0.05
SS18-218ENST00000581021 SLC25A39Q9BZJ4 359 aaPredicted RBP14.74□□□□□ -0.05
SS18-218ENST00000581021 PFDN2Q9UHV9 154 aa14.74□□□□□ -0.05
SS18-218ENST00000581021 TP53TG1Q9Y2A0 90 aa14.74□□□□□ -0.05
SS18-218ENST00000581021 C3orf84H3BNL1 204 aa14.73□□□□□ -0.05
SS18-218ENST00000581021 SSNA1O43805 119 aa14.73□□□□□ -0.05
SS18-218ENST00000581021 SELENOTP62341 195 aa14.73□□□□□ -0.05
SS18-218ENST00000581021 SHANK2-AS3Q9BTD1 123 aa14.73□□□□□ -0.05
SS18-218ENST00000581021 FBXL17Q9UF56 701 aa14.73□□□□□ -0.05
SS18-218ENST00000581021 DYNC2H1Q8NCM8 4307 aaKnown RBP14.73□□□□□ -0.05
SS18-218ENST00000581021 HYPMO75409 117 aa14.72□□□□□ -0.05
SS18-218ENST00000581021 PTTG1O95997 202 aa14.72□□□□□ -0.05
SS18-218ENST00000581021 C4BPBP20851 252 aa14.72□□□□□ -0.05
SS18-218ENST00000581021 EWSR1Q01844 656 aaKnown RBP eCLIP14.72□□□□□ -0.05
SS18-218ENST00000581021 CASC10Q5T4H9 136 aa14.72□□□□□ -0.05
SS18-218ENST00000581021 ZNF546Q86UE3 836 aa14.72□□□□□ -0.05
SS18-218ENST00000581021 STHQ8IWL8 128 aa14.72□□□□□ -0.05
SS18-218ENST00000581021 SEPSECSQ9HD40 501 aaKnown RBP14.72□□□□□ -0.05
SS18-218ENST00000581021 HIGD1AQ9Y241 93 aa14.72□□□□□ -0.05
SS18-218ENST00000581021 WDR83OSQ9Y284 106 aa14.72□□□□□ -0.05
SS18-218ENST00000581021 ALG5Q9Y673 324 aa14.72□□□□□ -0.05
SS18-218ENST00000581021 CA1P00915 261 aaPredicted RBP14.71□□□□□ -0.05
SS18-218ENST00000581021 SNRPD3P62318 126 aaKnown RBP14.71□□□□□ -0.05
SS18-218ENST00000581021 GDF5OSQ5U4N7 250 aa14.71□□□□□ -0.05
SS18-218ENST00000581021 ZFAND6Q6FIF0 208 aa14.71□□□□□ -0.05
SS18-218ENST00000581021 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.71□□□□□ -0.05
SS18-218ENST00000581021 PPP1R1CQ8WVI7 109 aa14.71□□□□□ -0.05
SS18-218ENST00000581021 C20orf173Q96LM9 149 aa14.71□□□□□ -0.05
SS18-218ENST00000581021 ARL6Q9H0F7 186 aa14.71□□□□□ -0.05
SS18-218ENST00000581021 UQCC1Q9NVA1 299 aa14.71□□□□□ -0.05
SS18-218ENST00000581021 UBE2L5PA0A1B0GUS4 154 aa14.7□□□□□ -0.06
SS18-218ENST00000581021 OR5G3P0C626 314 aa14.7□□□□□ -0.06
SS18-218ENST00000581021 LYL1P12980 280 aa14.7□□□□□ -0.06
SS18-218ENST00000581021 NHLH2Q02577 135 aa14.7□□□□□ -0.06
SS18-218ENST00000581021 STX12Q86Y82 276 aa14.7□□□□□ -0.06
SS18-218ENST00000581021 RSG1Q9BU20 258 aa14.7□□□□□ -0.06
SS18-218ENST00000581021 RNF126Q9BV68 326 aa14.7□□□□□ -0.06
SS18-218ENST00000581021 RYR3Q15413 4870 aa14.69□□□□□ -0.06
SS18-218ENST00000581021 CXCL3P19876 107 aa14.69□□□□□ -0.06
SS18-218ENST00000581021 PSMB3P49720 205 aa14.69□□□□□ -0.06
SS18-218ENST00000581021 RAP2BP61225 183 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms