RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 RD3LP0DJH9 198 aa11.85□□□□□ -0.51
SS18-216ENST00000580751 IGLL1P15814 213 aa11.85□□□□□ -0.51
SS18-216ENST00000580751 CLLU1Q5K131 121 aa11.85□□□□□ -0.51
SS18-216ENST00000580751 FFAR4Q5NUL3 377 aa11.85□□□□□ -0.51
SS18-216ENST00000580751 C9orf66Q5T8R8 295 aa11.85□□□□□ -0.51
SS18-216ENST00000580751 REC114Q7Z4M0 266 aa11.85□□□□□ -0.51
SS18-216ENST00000580751 GATAD1Q8WUU5 269 aa11.85□□□□□ -0.51
SS18-216ENST00000580751 PFDN5Q99471 154 aa11.85□□□□□ -0.51
SS18-216ENST00000580751 CHRDL1Q9BU40 450 aa11.85□□□□□ -0.51
SS18-216ENST00000580751 NDUFA4O00483 81 aa11.84□□□□□ -0.51
SS18-216ENST00000580751 INSL3P51460 131 aa11.84□□□□□ -0.51
SS18-216ENST00000580751 MIC13Q5XKP0 118 aa11.84□□□□□ -0.51
SS18-216ENST00000580751 ZNF600Q6ZNG1 722 aa11.84□□□□□ -0.51
SS18-216ENST00000580751 TMEM182Q6ZP80 229 aaPredicted RBP11.84□□□□□ -0.51
SS18-216ENST00000580751 OR51G1Q8NGK1 321 aa11.84□□□□□ -0.51
SS18-216ENST00000580751 CMYA5Q8N3K9 4069 aa11.84□□□□□ -0.51
SS18-216ENST00000580751 FBN3Q75N90 2809 aa11.84□□□□□ -0.51
SS18-216ENST00000580751 IGHV3-35A0A0C4DH35 117 aa11.83□□□□□ -0.52
SS18-216ENST00000580751 ZNF320A2RRD8 509 aa11.83□□□□□ -0.52
SS18-216ENST00000580751 A8MWP6 167 aa11.83□□□□□ -0.52
SS18-216ENST00000580751 TEX46H3BTG2 121 aa11.83□□□□□ -0.52
SS18-216ENST00000580751 SAP30O75446 220 aa11.83□□□□□ -0.52
SS18-216ENST00000580751 PSG1P11464 419 aa11.83□□□□□ -0.52
SS18-216ENST00000580751 ZNF90Q03938 601 aa11.83□□□□□ -0.52
SS18-216ENST00000580751 SAMD5Q5TGI4 173 aa11.83□□□□□ -0.52
SS18-216ENST00000580751 TMEM190Q8WZ59 177 aa11.83□□□□□ -0.52
SS18-216ENST00000580751 ACTR3CQ9C0K3 210 aaPredicted RBP11.83□□□□□ -0.52
SS18-216ENST00000580751 RPRMQ9NS64 109 aa11.83□□□□□ -0.52
SS18-216ENST00000580751 UFC1Q9Y3C8 167 aa11.83□□□□□ -0.52
SS18-216ENST00000580751 TRAV1-1A0A0B4J248 108 aa11.82□□□□□ -0.52
SS18-216ENST00000580751 WIPF1O43516 503 aa11.82□□□□□ -0.52
SS18-216ENST00000580751 YIF1AO95070 293 aa11.82□□□□□ -0.52
SS18-216ENST00000580751 ELLP55199 621 aaPredicted RBP11.82□□□□□ -0.52
SS18-216ENST00000580751 RHOBP62745 196 aa11.82□□□□□ -0.52
SS18-216ENST00000580751 TIGITQ495A1 244 aa11.82□□□□□ -0.52
SS18-216ENST00000580751 OXLD1Q5BKU9 147 aa11.82□□□□□ -0.52
SS18-216ENST00000580751 OR10G4Q8NGN3 311 aa11.82□□□□□ -0.52
SS18-216ENST00000580751 OR10G9Q8NGN4 311 aa11.82□□□□□ -0.52
SS18-216ENST00000580751 OR10G7Q8NGN6 311 aa11.82□□□□□ -0.52
SS18-216ENST00000580751 MRPL32Q9BYC8 188 aaKnown RBP11.82□□□□□ -0.52
SS18-216ENST00000580751 DNAJC4Q9NNZ3 241 aa11.82□□□□□ -0.52
SS18-216ENST00000580751 PFDN2Q9UHV9 154 aa11.82□□□□□ -0.52
SS18-216ENST00000580751 A0A1W2PPV4 95 aa11.81□□□□□ -0.52
SS18-216ENST00000580751 WI2-2373I1.2A0A1W2PRP0 233 aa11.81□□□□□ -0.52
SS18-216ENST00000580751 ZNF705EA8MWA4 302 aaPredicted RBP11.81□□□□□ -0.52
SS18-216ENST00000580751 G3V4G9 280 aa11.81□□□□□ -0.52
SS18-216ENST00000580751 HYPMO75409 117 aa11.81□□□□□ -0.52
SS18-216ENST00000580751 HBE1P02100 147 aa11.81□□□□□ -0.52
SS18-216ENST00000580751 RAB2AP61019 212 aa11.81□□□□□ -0.52
SS18-216ENST00000580751 FAM74A1Q5RGS3 127 aa11.81□□□□□ -0.52
SS18-216ENST00000580751 UNQ9165/PRO28630Q6UXU0 137 aa11.81□□□□□ -0.52
SS18-216ENST00000580751 RPP25LQ8N5L8 163 aaKnown RBP11.81□□□□□ -0.52
SS18-216ENST00000580751 LYPD6BQ8NI32 183 aa11.81□□□□□ -0.52
SS18-216ENST00000580751 MBD3L1Q8WWY6 194 aa11.81□□□□□ -0.52
SS18-216ENST00000580751 DAZ1Q9NQZ3 744 aaKnown RBP11.81□□□□□ -0.52
SS18-216ENST00000580751 SIGLEC8Q9NYZ4 499 aa11.81□□□□□ -0.52
SS18-216ENST00000580751 PLA2G2EQ9NZK7 142 aa11.81□□□□□ -0.52
SS18-216ENST00000580751 CTXND1A0A1B0GTU2 59 aa11.8□□□□□ -0.52
SS18-216ENST00000580751 C2orf70A6NJV1 201 aa11.8□□□□□ -0.52
SS18-216ENST00000580751 COX7A2P2O60397 106 aa11.8□□□□□ -0.52
SS18-216ENST00000580751 NMBP08949 121 aa11.8□□□□□ -0.52
SS18-216ENST00000580751 OR5G3P0C626 314 aa11.8□□□□□ -0.52
SS18-216ENST00000580751 MARC2Q969Z3 335 aa11.8□□□□□ -0.52
SS18-216ENST00000580751 RNF125Q96EQ8 232 aa11.8□□□□□ -0.52
SS18-216ENST00000580751 C20orf24Q9BUV8 137 aa11.8□□□□□ -0.52
SS18-216ENST00000580751 ZMAT5Q9UDW3 170 aaKnown RBP11.8□□□□□ -0.52
SS18-216ENST00000580751 PUS1Q9Y606 427 aaKnown RBP eCLIP11.8□□□□□ -0.52
SS18-216ENST00000580751 TMEM213A2RRL7 107 aa11.79□□□□□ -0.52
SS18-216ENST00000580751 K7EMT4 169 aa11.79□□□□□ -0.52
SS18-216ENST00000580751 CSN3P07498 182 aa11.79□□□□□ -0.52
SS18-216ENST00000580751 H2AFB1P0C5Y9 115 aa11.79□□□□□ -0.52
SS18-216ENST00000580751 TAS2R45P59539 299 aa11.79□□□□□ -0.52
SS18-216ENST00000580751 PMS2P11Q13670 270 aa11.79□□□□□ -0.52
SS18-216ENST00000580751 C10orf113Q5VZT2 155 aa11.79□□□□□ -0.52
SS18-216ENST00000580751 IL34Q6ZMJ4 242 aa11.79□□□□□ -0.52
SS18-216ENST00000580751 STXBP6Q8NFX7 210 aa11.79□□□□□ -0.52
SS18-216ENST00000580751 FAM213BQ8TBF2 198 aa11.79□□□□□ -0.52
SS18-216ENST00000580751 MED9Q9NWA0 146 aa11.79□□□□□ -0.52
SS18-216ENST00000580751 MRPL27Q9P0M9 148 aaKnown RBP11.79□□□□□ -0.52
SS18-216ENST00000580751 FUT9Q9Y231 359 aa11.79□□□□□ -0.52
SS18-216ENST00000580751 RFNGQ9Y644 331 aa11.79□□□□□ -0.52
SS18-216ENST00000580751 FOLR2P14207 255 aa11.78□□□□□ -0.52
SS18-216ENST00000580751 GATA2P23769 480 aaPredicted RBP11.78□□□□□ -0.52
SS18-216ENST00000580751 CDC34P49427 236 aaPredicted RBP11.78□□□□□ -0.52
SS18-216ENST00000580751 NDUFA5Q16718 116 aa11.78□□□□□ -0.52
SS18-216ENST00000580751 TM4SF20Q53R12 229 aa11.78□□□□□ -0.52
SS18-216ENST00000580751 KPRPQ5T749 579 aaPredicted RBP11.78□□□□□ -0.52
SS18-216ENST00000580751 TOMM20LQ6UXN7 152 aa11.78□□□□□ -0.52
SS18-216ENST00000580751 TMEM37Q8WXS4 190 aa11.78□□□□□ -0.52
SS18-216ENST00000580751 ZNF414Q96IQ9 312 aa11.78□□□□□ -0.52
SS18-216ENST00000580751 VSIRQ9H7M9 311 aa11.78□□□□□ -0.52
SS18-216ENST00000580751 HIGD1AQ9Y241 93 aa11.78□□□□□ -0.52
SS18-216ENST00000580751 IGLV1-51P01701 117 aa11.77□□□□□ -0.53
SS18-216ENST00000580751 IL4P05112 153 aa11.77□□□□□ -0.53
SS18-216ENST00000580751 ORM2P19652 201 aa11.77□□□□□ -0.53
SS18-216ENST00000580751 CBLN1P23435 193 aa11.77□□□□□ -0.53
SS18-216ENST00000580751 EGFEM1PQ0D2K5 195 aa11.77□□□□□ -0.53
SS18-216ENST00000580751 BEAN1Q3B7T3 259 aa11.77□□□□□ -0.53
SS18-216ENST00000580751 FAM78BQ5VT40 261 aa11.77□□□□□ -0.53
SS18-216ENST00000580751 DYNLRB2Q8TF09 96 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms