RNA–Protein interactions for RNA: ENST00000580278.5

CCDC144NL-AS1-213, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best)

Gene CCDC144NL-AS1, Length 1,819 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-213ENST00000580278 SCGB2A2Q13296 93 aa13.03□□□□□ -0.32
CCDC144NL-AS1-213ENST00000580278 LCNL1Q6ZST4 164 aa13.03□□□□□ -0.32
CCDC144NL-AS1-213ENST00000580278 IQCF2Q8IXL9 164 aa13.03□□□□□ -0.32
CCDC144NL-AS1-213ENST00000580278 Q8WTZ3 238 aa13.03□□□□□ -0.32
CCDC144NL-AS1-213ENST00000580278 SEC11CQ9BY50 192 aa13.03□□□□□ -0.32
CCDC144NL-AS1-213ENST00000580278 SERTAD4Q9NUC0 356 aa13.03□□□□□ -0.32
CCDC144NL-AS1-213ENST00000580278 CDC42EP3Q9UKI2 254 aa13.03□□□□□ -0.32
CCDC144NL-AS1-213ENST00000580278 HIGD1AQ9Y241 93 aa13.03□□□□□ -0.32
CCDC144NL-AS1-213ENST00000580278 CARHSP1Q9Y2V2 147 aaKnown RBP13.03□□□□□ -0.32
CCDC144NL-AS1-213ENST00000580278 INAFM1C9JVW0 142 aa13.02□□□□□ -0.32
CCDC144NL-AS1-213ENST00000580278 PAGE4O60829 102 aa13.02□□□□□ -0.32
CCDC144NL-AS1-213ENST00000580278 SRD5A1P18405 259 aa13.02□□□□□ -0.32
CCDC144NL-AS1-213ENST00000580278 TAGLN2P37802 199 aaKnown RBP13.02□□□□□ -0.32
CCDC144NL-AS1-213ENST00000580278 MEF2BQ02080 365 aaPredicted RBP13.02□□□□□ -0.32
CCDC144NL-AS1-213ENST00000580278 KIAA0141Q14154 515 aaPredicted RBP13.02□□□□□ -0.32
CCDC144NL-AS1-213ENST00000580278 OR5AU1Q8NGC0 362 aa13.02□□□□□ -0.32
CCDC144NL-AS1-213ENST00000580278 SLC25A39Q9BZJ4 359 aaPredicted RBP13.02□□□□□ -0.32
CCDC144NL-AS1-213ENST00000580278 FAM181BA6NEQ2 426 aa13.02□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 OR7C2O60412 319 aa13.02□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 NDUFS6O75380 124 aaKnown RBP13.02□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 SCGB2A1O75556 95 aa13.02□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 ZNF600Q6ZNG1 722 aa13.02□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 ZFAND3Q9H8U3 227 aa13.02□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 PUS1Q9Y606 427 aaKnown RBP eCLIP13.02□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.01□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 F8W036 122 aa13.01□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 H3BRN7 92 aa13.01□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 ZNF343Q6P1L6 599 aa13.01□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 RNF152Q8N8N0 203 aa13.01□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 MYOZ3Q8TDC0 251 aa13.01□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 TMEM167BQ9NRX6 74 aa13.01□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 ARL2-SNX15V9GYD0 113 aa13.01□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 CYB561D1Q8N8Q1 229 aa13□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 FXYD5Q96DB9 178 aa13□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 SHANK2-AS3Q9BTD1 123 aa13□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 YTHDF2Q9Y5A9 579 aaKnown RBP13□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 FN1P02751 2386 aaKnown RBP13□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 FAM74A7A6NL05 159 aa12.99□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 TRBV12-3P01733 135 aa12.99□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 RNASE1P07998 156 aaKnown RBP12.99□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 PYYP10082 97 aa12.99□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 GP9P14770 177 aa12.99□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 UBE2G2P60604 165 aa12.99□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 LEMD1Q68G75 181 aa12.99□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 Q6ZSV7 163 aa12.99□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 IGHV3-35A0A0C4DH35 117 aa12.99□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 A0A0G2JLM5 398 aa12.99□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 PPP5D1E7EU14 171 aa12.99□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 OR10J4P0C629 311 aa12.99□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 ATP5G3P48201 142 aa12.99□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 HILS1P60008 231 aa12.99□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 FOXE3Q13461 319 aa12.99□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 FAM90A2PQ658T7 463 aa12.99□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 TOMM20LQ6UXN7 152 aa12.99□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 PAXXQ9BUH6 204 aa12.99□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 OR51M1Q9H341 326 aa12.99□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 TMA7Q9Y2S6 64 aaKnown RBP12.99□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 C11orf94C9JXX5 98 aa12.98□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 IGHV3-11P01762 117 aa12.98□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 APOC3P02656 99 aa12.98□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 ELANEP08246 267 aa12.98□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 RPL15P61313 204 aaKnown RBP12.98□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 UBE2L3P68036 154 aaKnown RBP12.98□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 SRSF2Q01130 221 aaKnown RBP12.98□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 GUCA2BQ16661 112 aa12.98□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 TEX38Q6PEX7 206 aa12.98□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 STXBP6Q8NFX7 210 aa12.98□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 CLPSL1A2RUU4 121 aa12.97□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 SLC35B1P78383 322 aa12.97□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 TXNDC17Q9BRA2 123 aa12.97□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 TMEM14CQ9P0S9 112 aa12.97□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 F8P00451 2351 aa12.97□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 ZNF98A6NK75 572 aa12.97□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 TMEM250H0YL14 139 aa12.97□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 MRPS12O15235 138 aaKnown RBP12.97□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 NPPCP23582 126 aa12.97□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 ARL3P36405 182 aa12.97□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 RELQ04864 619 aaPredicted RBP12.97□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 HIST2H2BDQ6DRA6 164 aa12.97□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 OR4X2Q8NGF9 303 aa12.97□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 ZNF418Q8TF45 676 aaPredicted RBP12.97□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 BMPR1BO00238 502 aa12.96□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 RPLP1P05386 114 aaKnown RBP12.96□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 SOHLH1Q5JUK2 328 aa12.96□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 CST9LP1Q5W188 147 aa12.96□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 OR4F5Q8NH21 305 aa12.96□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 OR4F4Q96R69 305 aa12.96□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 GNB4Q9HAV0 340 aa12.96□□□□□ -0.33
CCDC144NL-AS1-213ENST00000580278 IGHV3OR16-8A0A075B7F1 116 aa12.95□□□□□ -0.34
CCDC144NL-AS1-213ENST00000580278 A0A1W2PRE2 83 aa12.95□□□□□ -0.34
CCDC144NL-AS1-213ENST00000580278 GGTLC3B5MD39 225 aa12.95□□□□□ -0.34
CCDC144NL-AS1-213ENST00000580278 WIPF2Q8TF74 440 aaPredicted RBP12.95□□□□□ -0.34
CCDC144NL-AS1-213ENST00000580278 RABAC1Q9UI14 185 aa12.95□□□□□ -0.34
CCDC144NL-AS1-213ENST00000580278 PDE6DO43924 150 aa12.95□□□□□ -0.34
CCDC144NL-AS1-213ENST00000580278 ATRAIDQ6UW56 229 aa12.95□□□□□ -0.34
CCDC144NL-AS1-213ENST00000580278 NIPBLQ6KC79 2804 aaeCLIP12.94□□□□□ -0.34
CCDC144NL-AS1-213ENST00000580278 MYCNOSP40205 109 aa12.94□□□□□ -0.34
CCDC144NL-AS1-213ENST00000580278 FAM209BQ5JX69 171 aa12.94□□□□□ -0.34
CCDC144NL-AS1-213ENST00000580278 SVBPQ8N300 66 aa12.94□□□□□ -0.34
CCDC144NL-AS1-213ENST00000580278 KLHDC1Q8N7A1 406 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms