RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 OR11H12B2RN74 326 aa11.09□□□□□ -0.63
TRAPPC8-207ENST00000580104 FAM106CPP0CH98 169 aa11.09□□□□□ -0.63
TRAPPC8-207ENST00000580104 KLF17Q5JT82 389 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC8-207ENST00000580104 TMEM200BQ69YZ2 307 aa11.09□□□□□ -0.63
TRAPPC8-207ENST00000580104 OR11H1Q8NG94 326 aa11.09□□□□□ -0.63
TRAPPC8-207ENST00000580104 OR11H2Q8NH07 326 aa11.09□□□□□ -0.63
TRAPPC8-207ENST00000580104 MALRD1Q5VYJ5 2156 aa11.08□□□□□ -0.64
TRAPPC8-207ENST00000580104 NUP210Q8TEM1 1887 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC8-207ENST00000580104 K7EN84 100 aa11.08□□□□□ -0.64
TRAPPC8-207ENST00000580104 LMO1P25800 156 aa11.08□□□□□ -0.64
TRAPPC8-207ENST00000580104 C8orf46Q8TAG6 207 aa11.08□□□□□ -0.64
TRAPPC8-207ENST00000580104 TMEM133Q9H2Q1 129 aa11.08□□□□□ -0.64
TRAPPC8-207ENST00000580104 DPM3Q9P2X0 92 aa11.08□□□□□ -0.64
TRAPPC8-207ENST00000580104 NDUFA3O95167 84 aa11.08□□□□□ -0.64
TRAPPC8-207ENST00000580104 OR5AN1Q8NGI8 311 aa11.08□□□□□ -0.64
TRAPPC8-207ENST00000580104 MRPL27Q9P0M9 148 aaKnown RBP11.08□□□□□ -0.64
TRAPPC8-207ENST00000580104 OR10J6PQ8NGY7 276 aa11.08□□□□□ -0.64
TRAPPC8-207ENST00000580104 LOC105371242A0A075B767 164 aa11.08□□□□□ -0.64
TRAPPC8-207ENST00000580104 IGHV3OR16-10A0A075B7F0 116 aa11.08□□□□□ -0.64
TRAPPC8-207ENST00000580104 D6R8Y8 96 aa11.08□□□□□ -0.64
TRAPPC8-207ENST00000580104 RPL15P61313 204 aaKnown RBP11.08□□□□□ -0.64
TRAPPC8-207ENST00000580104 GUSBP1Q15486 140 aa11.08□□□□□ -0.64
TRAPPC8-207ENST00000580104 STPG4Q8N801 248 aa11.08□□□□□ -0.64
TRAPPC8-207ENST00000580104 ORAOV1Q8WV07 137 aa11.08□□□□□ -0.64
TRAPPC8-207ENST00000580104 PLSCR4Q9NRQ2 329 aa11.08□□□□□ -0.64
TRAPPC8-207ENST00000580104 JKAMPQ9P055 326 aa11.08□□□□□ -0.64
TRAPPC8-207ENST00000580104 SLC25A15Q9Y619 301 aa11.08□□□□□ -0.64
TRAPPC8-207ENST00000580104 HBDP02042 147 aa11.07□□□□□ -0.64
TRAPPC8-207ENST00000580104 ZNF329Q86UD4 541 aa11.07□□□□□ -0.64
TRAPPC8-207ENST00000580104 OR2K2Q8NGT1 345 aa11.07□□□□□ -0.64
TRAPPC8-207ENST00000580104 COX11Q9Y6N1 276 aa11.07□□□□□ -0.64
TRAPPC8-207ENST00000580104 H0YJW9 148 aa11.07□□□□□ -0.64
TRAPPC8-207ENST00000580104 Q8NFD4 153 aa11.07□□□□□ -0.64
TRAPPC8-207ENST00000580104 IGKV3-15P01624 115 aa11.07□□□□□ -0.64
TRAPPC8-207ENST00000580104 DLX6P56179 175 aa11.07□□□□□ -0.64
TRAPPC8-207ENST00000580104 TTC9CQ8N5M4 171 aa11.07□□□□□ -0.64
TRAPPC8-207ENST00000580104 PYGO2Q9BRQ0 406 aa11.07□□□□□ -0.64
TRAPPC8-207ENST00000580104 TMEM238LA0A1B0GVL6 79 aa11.07□□□□□ -0.64
TRAPPC8-207ENST00000580104 A6NJY4 79 aa11.07□□□□□ -0.64
TRAPPC8-207ENST00000580104 FAM74A4Q5TZK3 123 aa11.07□□□□□ -0.64
TRAPPC8-207ENST00000580104 Q6AWC8 147 aa11.07□□□□□ -0.64
TRAPPC8-207ENST00000580104 IFI27L1Q96BM0 104 aa11.07□□□□□ -0.64
TRAPPC8-207ENST00000580104 TGFAP01135 160 aa11.06□□□□□ -0.64
TRAPPC8-207ENST00000580104 PF4V1P10720 104 aa11.06□□□□□ -0.64
TRAPPC8-207ENST00000580104 DGAT2L7PQ6IED9 249 aa11.06□□□□□ -0.64
TRAPPC8-207ENST00000580104 TMEM14BQ9NUH8 114 aa11.06□□□□□ -0.64
TRAPPC8-207ENST00000580104 WNT2P09544 360 aa11.06□□□□□ -0.64
TRAPPC8-207ENST00000580104 CD59P13987 128 aa11.06□□□□□ -0.64
TRAPPC8-207ENST00000580104 GAFA1Q96PS6 74 aa11.06□□□□□ -0.64
TRAPPC8-207ENST00000580104 SLC25A39Q9BZJ4 359 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC8-207ENST00000580104 IGKV2-40A0A087WW87 121 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC8-207ENST00000580104 IGKV2D-40P01614 121 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC8-207ENST00000580104 ZNF418Q8TF45 676 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC8-207ENST00000580104 C5orf30Q96GV9 206 aa11.06□□□□□ -0.64
TRAPPC8-207ENST00000580104 A0A1B0GWB2 263 aa11.06□□□□□ -0.64
TRAPPC8-207ENST00000580104 IGLL1P15814 213 aa11.06□□□□□ -0.64
TRAPPC8-207ENST00000580104 APOBEC3AP31941 199 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC8-207ENST00000580104 COA6Q5JTJ3 125 aaKnown RBP11.06□□□□□ -0.64
TRAPPC8-207ENST00000580104 PRSS2P07478 247 aa11.05□□□□□ -0.64
TRAPPC8-207ENST00000580104 B9A039 149 aa11.05□□□□□ -0.64
TRAPPC8-207ENST00000580104 TIMM23O14925 209 aa11.05□□□□□ -0.64
TRAPPC8-207ENST00000580104 DKK1O94907 266 aa11.05□□□□□ -0.64
TRAPPC8-207ENST00000580104 RASL11AQ6T310 242 aa11.05□□□□□ -0.64
TRAPPC8-207ENST00000580104 Q6ZPA2 131 aa11.05□□□□□ -0.64
TRAPPC8-207ENST00000580104 TMEM167AQ8TBQ9 72 aa11.05□□□□□ -0.64
TRAPPC8-207ENST00000580104 RNF138Q8WVD3 245 aa11.05□□□□□ -0.64
TRAPPC8-207ENST00000580104 A0A1B0GW15 77 aa11.05□□□□□ -0.64
TRAPPC8-207ENST00000580104 TPTE2P1Q5T6R2 138 aa11.05□□□□□ -0.64
TRAPPC8-207ENST00000580104 IGFL4Q6B9Z1 124 aa11.05□□□□□ -0.64
TRAPPC8-207ENST00000580104 LYZL1Q6UWQ5 148 aa11.05□□□□□ -0.64
TRAPPC8-207ENST00000580104 SLC25A48Q6ZT89 311 aaKnown RBP11.05□□□□□ -0.64
TRAPPC8-207ENST00000580104 MRPL16Q9NX20 251 aaKnown RBP11.05□□□□□ -0.64
TRAPPC8-207ENST00000580104 IGKV3-20P01619 116 aa11.04□□□□□ -0.64
TRAPPC8-207ENST00000580104 SFTPCP11686 197 aa11.04□□□□□ -0.64
TRAPPC8-207ENST00000580104 FAM168AQ92567 244 aa11.04□□□□□ -0.64
TRAPPC8-207ENST00000580104 TNCP24821 2201 aa11.04□□□□□ -0.64
TRAPPC8-207ENST00000580104 TEX43Q6ZNM6 134 aa11.04□□□□□ -0.64
TRAPPC8-207ENST00000580104 ARPC1AQ92747 370 aa11.04□□□□□ -0.64
TRAPPC8-207ENST00000580104 SMKR1H3BMG3 65 aa11.04□□□□□ -0.64
TRAPPC8-207ENST00000580104 APOMO95445 188 aa11.04□□□□□ -0.64
TRAPPC8-207ENST00000580104 CRIP3Q6Q6R5 217 aa11.04□□□□□ -0.64
TRAPPC8-207ENST00000580104 Q8TAT8 98 aa11.04□□□□□ -0.64
TRAPPC8-207ENST00000580104 MMP23AO75900 390 aa11.04□□□□□ -0.64
TRAPPC8-207ENST00000580104 ARFGEF3Q5TH69 2177 aa11.04□□□□□ -0.64
TRAPPC8-207ENST00000580104 C15orf65H3BRN8 121 aa11.03□□□□□ -0.64
TRAPPC8-207ENST00000580104 NEUROG1Q92886 237 aa11.03□□□□□ -0.64
TRAPPC8-207ENST00000580104 MRPS16Q9Y3D3 137 aaKnown RBP11.03□□□□□ -0.64
TRAPPC8-207ENST00000580104 PCNX2A6NKB5 2137 aa11.03□□□□□ -0.64
TRAPPC8-207ENST00000580104 ARMS2P0C7Q2 107 aa11.03□□□□□ -0.64
TRAPPC8-207ENST00000580104 LY6EQ16553 131 aa11.03□□□□□ -0.64
TRAPPC8-207ENST00000580104 CLEC19AQ6UXS0 136 aa11.03□□□□□ -0.64
TRAPPC8-207ENST00000580104 MRPL52Q86TS9 123 aaKnown RBP11.03□□□□□ -0.64
TRAPPC8-207ENST00000580104 SCGB3A1Q96QR1 104 aa11.03□□□□□ -0.64
TRAPPC8-207ENST00000580104 BEX4Q9NWD9 120 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC8-207ENST00000580104 NBR2O15453 112 aa11.03□□□□□ -0.64
TRAPPC8-207ENST00000580104 FRMD6-AS1P0C7T7 363 aa11.03□□□□□ -0.64
TRAPPC8-207ENST00000580104 Q6ZSR3 168 aa11.03□□□□□ -0.64
TRAPPC8-207ENST00000580104 SPACA3Q8IXA5 215 aa11.03□□□□□ -0.64
TRAPPC8-207ENST00000580104 FAM57AQ8TBR7 257 aa11.03□□□□□ -0.64
TRAPPC8-207ENST00000580104 MS4A6AQ9H2W1 248 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms