RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 TRGV4A0A0C4DH28 118 aa12.37□□□□□ -0.43
ITGB4-206ENST00000579662 E9PQ18 207 aa12.37□□□□□ -0.43
ITGB4-206ENST00000579662 HTN3P15516 51 aa12.37□□□□□ -0.43
ITGB4-206ENST00000579662 SAA4P35542 130 aa12.37□□□□□ -0.43
ITGB4-206ENST00000579662 PRR30Q53SZ7 412 aaPredicted RBP12.37□□□□□ -0.43
ITGB4-206ENST00000579662 SAP30O75446 220 aa12.36□□□□□ -0.43
ITGB4-206ENST00000579662 TDGF1P13385 188 aa12.36□□□□□ -0.43
ITGB4-206ENST00000579662 DTX2Q86UW9 622 aa12.36□□□□□ -0.43
ITGB4-206ENST00000579662 C14orf144Q96I85 54 aa12.36□□□□□ -0.43
ITGB4-206ENST00000579662 DPM2O94777 84 aa12.36□□□□□ -0.43
ITGB4-206ENST00000579662 C5orf24Q7Z6I8 188 aa12.36□□□□□ -0.43
ITGB4-206ENST00000579662 LOC102724200A0A096LPH7 203 aaPredicted RBP12.36□□□□□ -0.43
ITGB4-206ENST00000579662 NPIPB5A8MRT5 1133 aa12.36□□□□□ -0.43
ITGB4-206ENST00000579662 LINC01551Q86U37 167 aa12.36□□□□□ -0.43
ITGB4-206ENST00000579662 EXOC3-AS1Q8N2X6 119 aa12.36□□□□□ -0.43
ITGB4-206ENST00000579662 HIST1H2BKO60814 126 aa12.35□□□□□ -0.43
ITGB4-206ENST00000579662 HIST1H2BJP06899 126 aa12.35□□□□□ -0.43
ITGB4-206ENST00000579662 HIST1H2BOP23527 126 aa12.35□□□□□ -0.43
ITGB4-206ENST00000579662 HIST1H2BBP33778 126 aa12.35□□□□□ -0.43
ITGB4-206ENST00000579662 HIST1H2BDP58876 126 aa12.35□□□□□ -0.43
ITGB4-206ENST00000579662 HIST1H2BCP62807 126 aa12.35□□□□□ -0.43
ITGB4-206ENST00000579662 HIST2H2BEQ16778 126 aa12.35□□□□□ -0.43
ITGB4-206ENST00000579662 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.35□□□□□ -0.43
ITGB4-206ENST00000579662 HIST1H2BHQ93079 126 aa12.35□□□□□ -0.43
ITGB4-206ENST00000579662 HIST1H2BNQ99877 126 aa12.35□□□□□ -0.43
ITGB4-206ENST00000579662 HIST1H2BMQ99879 126 aa12.35□□□□□ -0.43
ITGB4-206ENST00000579662 A6NNC1 897 aa12.35□□□□□ -0.43
ITGB4-206ENST00000579662 PSG3Q16557 428 aa12.35□□□□□ -0.43
ITGB4-206ENST00000579662 IGLV1-44P01699 117 aa12.35□□□□□ -0.43
ITGB4-206ENST00000579662 JKAMPQ9P055 326 aa12.35□□□□□ -0.43
ITGB4-206ENST00000579662 A0A0G2JRQ6 117 aa12.35□□□□□ -0.43
ITGB4-206ENST00000579662 MSMBP08118 114 aa12.35□□□□□ -0.43
ITGB4-206ENST00000579662 RNASE1P07998 156 aaKnown RBP12.35□□□□□ -0.43
ITGB4-206ENST00000579662 CD33P20138 364 aa12.34□□□□□ -0.43
ITGB4-206ENST00000579662 BEX4Q9NWD9 120 aaPredicted RBP12.34□□□□□ -0.43
ITGB4-206ENST00000579662 IGKV1-6A0A0C4DH72 117 aa12.34□□□□□ -0.43
ITGB4-206ENST00000579662 SRD5A1P18405 259 aa12.34□□□□□ -0.43
ITGB4-206ENST00000579662 PIP4P2Q8N4L2 257 aa12.34□□□□□ -0.43
ITGB4-206ENST00000579662 PPIFP30405 207 aaKnown RBP12.34□□□□□ -0.43
ITGB4-206ENST00000579662 KLF17Q5JT82 389 aaPredicted RBP12.34□□□□□ -0.43
ITGB4-206ENST00000579662 TEX36Q5VZQ5 186 aa12.34□□□□□ -0.43
ITGB4-206ENST00000579662 ZNF833PQ6ZTB9 187 aa12.34□□□□□ -0.43
ITGB4-206ENST00000579662 SMPXQ9UHP9 88 aa12.34□□□□□ -0.43
ITGB4-206ENST00000579662 RBMY1BA6NDE4 496 aaKnown RBP12.34□□□□□ -0.43
ITGB4-206ENST00000579662 RBMY1EA6NEQ0 496 aaKnown RBP12.34□□□□□ -0.43
ITGB4-206ENST00000579662 RBMY1DP0C7P1 496 aaKnown RBP12.34□□□□□ -0.43
ITGB4-206ENST00000579662 RBMY1A1P0DJD3 496 aaKnown RBP12.34□□□□□ -0.43
ITGB4-206ENST00000579662 RBMY1CP0DJD4 496 aa12.34□□□□□ -0.43
ITGB4-206ENST00000579662 SP5Q6BEB4 398 aaPredicted RBP12.34□□□□□ -0.43
ITGB4-206ENST00000579662 ZNF562Q6V9R5 426 aa12.34□□□□□ -0.43
ITGB4-206ENST00000579662 NIT1Q86X76 327 aa12.34□□□□□ -0.43
ITGB4-206ENST00000579662 FAM110DQ8TAY7 271 aaPredicted RBP12.34□□□□□ -0.43
ITGB4-206ENST00000579662 TOMM7Q9P0U1 55 aa12.34□□□□□ -0.43
ITGB4-206ENST00000579662 SCGB1A1P11684 91 aa12.33□□□□□ -0.44
ITGB4-206ENST00000579662 KIAA1671Q9BY89 1806 aa12.33□□□□□ -0.44
ITGB4-206ENST00000579662 MYLKQ15746 1914 aa12.33□□□□□ -0.44
ITGB4-206ENST00000579662 IGKV1-16P04430 117 aa12.33□□□□□ -0.44
ITGB4-206ENST00000579662 PDE6HQ13956 83 aa12.33□□□□□ -0.44
ITGB4-206ENST00000579662 Q6ZR03 302 aa12.33□□□□□ -0.44
ITGB4-206ENST00000579662 TRAV9-2A0A087WT02 112 aa12.33□□□□□ -0.44
ITGB4-206ENST00000579662 MALP21145 153 aa12.33□□□□□ -0.44
ITGB4-206ENST00000579662 C11orf44Q8N8P7 122 aa12.33□□□□□ -0.44
ITGB4-206ENST00000579662 HS3ST6Q96QI5 342 aa12.33□□□□□ -0.44
ITGB4-206ENST00000579662 ERVK11-1P61568 191 aa12.33□□□□□ -0.44
ITGB4-206ENST00000579662 RNF166Q96A37 237 aaPredicted RBP12.33□□□□□ -0.44
ITGB4-206ENST00000579662 CHTOPQ9Y3Y2 248 aaKnown RBP12.33□□□□□ -0.44
ITGB4-206ENST00000579662 UBE2CO00762 179 aa12.32□□□□□ -0.44
ITGB4-206ENST00000579662 CA1P00915 261 aaPredicted RBP12.32□□□□□ -0.44
ITGB4-206ENST00000579662 CD28P10747 220 aa12.32□□□□□ -0.44
ITGB4-206ENST00000579662 ZNF415Q09FC8 603 aa12.32□□□□□ -0.44
ITGB4-206ENST00000579662 Q6ZRM9 215 aa12.32□□□□□ -0.44
ITGB4-206ENST00000579662 RPRMLQ8N4K4 120 aa12.32□□□□□ -0.44
ITGB4-206ENST00000579662 SHANK2-AS3Q9BTD1 123 aa12.32□□□□□ -0.44
ITGB4-206ENST00000579662 NUP210Q8TEM1 1887 aaPredicted RBP12.32□□□□□ -0.44
ITGB4-206ENST00000579662 LINC00311Q8N616 119 aa12.32□□□□□ -0.44
ITGB4-206ENST00000579662 C1orf147Q96MC9 270 aaPredicted RBP12.32□□□□□ -0.44
ITGB4-206ENST00000579662 RFNGQ9Y644 331 aa12.32□□□□□ -0.44
ITGB4-206ENST00000579662 LY6HO94772 140 aa12.32□□□□□ -0.44
ITGB4-206ENST00000579662 LAGE3Q14657 143 aa12.32□□□□□ -0.44
ITGB4-206ENST00000579662 LCN12Q6JVE5 192 aa12.32□□□□□ -0.44
ITGB4-206ENST00000579662 LHFPL4Q7Z7J7 247 aa12.32□□□□□ -0.44
ITGB4-206ENST00000579662 RCHY1Q96PM5 261 aa12.32□□□□□ -0.44
ITGB4-206ENST00000579662 SLC25A2Q9BXI2 301 aa12.32□□□□□ -0.44
ITGB4-206ENST00000579662 TMEM14BQ9NUH8 114 aa12.32□□□□□ -0.44
ITGB4-206ENST00000579662 PRADC1Q9BSG0 188 aa12.32□□□□□ -0.44
ITGB4-206ENST00000579662 SH2D1AO60880 128 aa12.32□□□□□ -0.44
ITGB4-206ENST00000579662 DAZ1Q9NQZ3 744 aaKnown RBP12.32□□□□□ -0.44
ITGB4-206ENST00000579662 GSN-AS1Q9NRJ2 163 aa12.32□□□□□ -0.44
ITGB4-206ENST00000579662 ST6GALNAC6Q969X2 333 aa12.31□□□□□ -0.44
ITGB4-206ENST00000579662 IGHV2-70DA0A0C4DH43 119 aa12.31□□□□□ -0.44
ITGB4-206ENST00000579662 A0A1W2PPI3 338 aa12.31□□□□□ -0.44
ITGB4-206ENST00000579662 IGKCP01834 107 aa12.31□□□□□ -0.44
ITGB4-206ENST00000579662 CFHR2P36980 270 aa12.31□□□□□ -0.44
ITGB4-206ENST00000579662 ZNF329Q86UD4 541 aa12.31□□□□□ -0.44
ITGB4-206ENST00000579662 C1QTNF4Q9BXJ3 329 aa12.31□□□□□ -0.44
ITGB4-206ENST00000579662 IGLV3-9A0A075B6K5 115 aa12.31□□□□□ -0.44
ITGB4-206ENST00000579662 LOC105371267A0A1B0GV96 52 aa12.31□□□□□ -0.44
ITGB4-206ENST00000579662 COLCA2A8K830 154 aa12.31□□□□□ -0.44
ITGB4-206ENST00000579662 EVI2AP22794 236 aa12.31□□□□□ -0.44
ITGB4-206ENST00000579662 IGHV1-69DA0A0B4J2H0 117 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms