RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 KMT2AQ03164 3969 aa11.47□□□□□ -0.57
CRLF3-203ENST00000578692 C9orf170A2RU37 121 aa11.46□□□□□ -0.57
CRLF3-203ENST00000578692 NAP1L6A6NFF2 107 aa11.46□□□□□ -0.57
CRLF3-203ENST00000578692 PSMB3P49720 205 aa11.46□□□□□ -0.57
CRLF3-203ENST00000578692 DEFB1P60022 68 aa11.46□□□□□ -0.57
CRLF3-203ENST00000578692 SAV1Q9H4B6 383 aaPredicted RBP11.46□□□□□ -0.57
CRLF3-203ENST00000578692 APLNQ9ULZ1 77 aa11.46□□□□□ -0.57
CRLF3-203ENST00000578692 TRAV10A0A0B4J240 114 aa11.45□□□□□ -0.58
CRLF3-203ENST00000578692 SOCS3O14543 225 aa11.45□□□□□ -0.58
CRLF3-203ENST00000578692 ADAP1O75689 374 aa11.45□□□□□ -0.58
CRLF3-203ENST00000578692 NDUFB6O95139 128 aa11.45□□□□□ -0.58
CRLF3-203ENST00000578692 IGKV3-20P01619 116 aa11.45□□□□□ -0.58
CRLF3-203ENST00000578692 ID3Q02535 119 aa11.45□□□□□ -0.58
CRLF3-203ENST00000578692 TRIQKQ629K1 86 aa11.45□□□□□ -0.58
CRLF3-203ENST00000578692 GSG1LQ6UXU4 331 aa11.45□□□□□ -0.58
CRLF3-203ENST00000578692 FOXI2Q6ZQN5 318 aa11.45□□□□□ -0.58
CRLF3-203ENST00000578692 Q6ZTC4 211 aa11.45□□□□□ -0.58
CRLF3-203ENST00000578692 COQ8AQ8NI60 647 aa11.45□□□□□ -0.58
CRLF3-203ENST00000578692 FLVCR2Q9UPI3 526 aa11.45□□□□□ -0.58
CRLF3-203ENST00000578692 STRAPQ9Y3F4 350 aaKnown RBP11.45□□□□□ -0.58
CRLF3-203ENST00000578692 H3BP45 60 aa11.44□□□□□ -0.58
CRLF3-203ENST00000578692 BPIFCQ8NFQ6 507 aa11.44□□□□□ -0.58
CRLF3-203ENST00000578692 SLC45A2Q9UMX9 530 aa11.44□□□□□ -0.58
CRLF3-203ENST00000578692 LINC00854A0A1B0GVQ3 168 aa11.43□□□□□ -0.58
CRLF3-203ENST00000578692 ISLRO14498 428 aa11.43□□□□□ -0.58
CRLF3-203ENST00000578692 IFNA21P01568 189 aa11.43□□□□□ -0.58
CRLF3-203ENST00000578692 OR4E1P0C645 316 aa11.43□□□□□ -0.58
CRLF3-203ENST00000578692 ORM2P19652 201 aa11.43□□□□□ -0.58
CRLF3-203ENST00000578692 GATA2P23769 480 aaPredicted RBP11.43□□□□□ -0.58
CRLF3-203ENST00000578692 FXYD7P58549 80 aa11.43□□□□□ -0.58
CRLF3-203ENST00000578692 POLR2GP62487 172 aaKnown RBP eCLIP11.43□□□□□ -0.58
CRLF3-203ENST00000578692 AKR1C1Q04828 323 aa11.43□□□□□ -0.58
CRLF3-203ENST00000578692 SPATA31B1PQ5VZV4 182 aa11.43□□□□□ -0.58
CRLF3-203ENST00000578692 ZNF705AQ6ZN79 300 aaPredicted RBP11.43□□□□□ -0.58
CRLF3-203ENST00000578692 TMEM182Q6ZP80 229 aaPredicted RBP11.43□□□□□ -0.58
CRLF3-203ENST00000578692 OR4B1Q8NGF8 309 aa11.43□□□□□ -0.58
CRLF3-203ENST00000578692 CLUHP3Q96NS8 147 aa11.43□□□□□ -0.58
CRLF3-203ENST00000578692 NEU1Q99519 415 aa11.43□□□□□ -0.58
CRLF3-203ENST00000578692 SLC25A22Q9H936 323 aa11.43□□□□□ -0.58
CRLF3-203ENST00000578692 CELA1Q9UNI1 258 aa11.43□□□□□ -0.58
CRLF3-203ENST00000578692 ZNF98A6NK75 572 aa11.42□□□□□ -0.58
CRLF3-203ENST00000578692 CENPXA8MT69 81 aa11.42□□□□□ -0.58
CRLF3-203ENST00000578692 GALR1P47211 349 aa11.42□□□□□ -0.58
CRLF3-203ENST00000578692 MEOX2P50222 304 aa11.42□□□□□ -0.58
CRLF3-203ENST00000578692 PRR20EP86478 221 aa11.42□□□□□ -0.58
CRLF3-203ENST00000578692 PRR20CP86479 221 aa11.42□□□□□ -0.58
CRLF3-203ENST00000578692 PRR20DP86480 221 aa11.42□□□□□ -0.58
CRLF3-203ENST00000578692 PRR20BP86481 221 aa11.42□□□□□ -0.58
CRLF3-203ENST00000578692 PRR20AP86496 221 aa11.42□□□□□ -0.58
CRLF3-203ENST00000578692 C12orf74Q32Q52 190 aa11.42□□□□□ -0.58
CRLF3-203ENST00000578692 SAMD13Q5VXD3 122 aa11.42□□□□□ -0.58
CRLF3-203ENST00000578692 EBLN2Q6P2I7 272 aa11.42□□□□□ -0.58
CRLF3-203ENST00000578692 TMEM144Q7Z5S9 345 aa11.42□□□□□ -0.58
CRLF3-203ENST00000578692 C16orf92Q96LL3 132 aa11.42□□□□□ -0.58
CRLF3-203ENST00000578692 SDHCQ99643 169 aaPredicted RBP11.42□□□□□ -0.58
CRLF3-203ENST00000578692 RSG1Q9BU20 258 aa11.42□□□□□ -0.58
CRLF3-203ENST00000578692 SLC25A32Q9H2D1 315 aa11.42□□□□□ -0.58
CRLF3-203ENST00000578692 RPRMQ9NS64 109 aa11.42□□□□□ -0.58
CRLF3-203ENST00000578692 PSENENQ9NZ42 101 aa11.42□□□□□ -0.58
CRLF3-203ENST00000578692 IGHV4-4A0A075B6R2 117 aa11.41□□□□□ -0.58
CRLF3-203ENST00000578692 SMIM9A6NGZ8 99 aa11.41□□□□□ -0.58
CRLF3-203ENST00000578692 ZNF705FA8MVS1 300 aaPredicted RBP11.41□□□□□ -0.58
CRLF3-203ENST00000578692 ZNF705DP0CH99 300 aaPredicted RBP11.41□□□□□ -0.58
CRLF3-203ENST00000578692 ZNF705BP0CI00 300 aaPredicted RBP11.41□□□□□ -0.58
CRLF3-203ENST00000578692 S100A7P31151 101 aa11.41□□□□□ -0.58
CRLF3-203ENST00000578692 PAX9P55771 341 aa11.41□□□□□ -0.58
CRLF3-203ENST00000578692 FAM78BQ5VT40 261 aa11.41□□□□□ -0.58
CRLF3-203ENST00000578692 ACOT7LQ6ZUV0 252 aa11.41□□□□□ -0.58
CRLF3-203ENST00000578692 ZNF767PQ75MW2 155 aa11.41□□□□□ -0.58
CRLF3-203ENST00000578692 OR4D5Q8NGN0 318 aa11.41□□□□□ -0.58
CRLF3-203ENST00000578692 OR1B1Q8NGR6 318 aa11.41□□□□□ -0.58
CRLF3-203ENST00000578692 TMEM147Q9BVK8 224 aa11.41□□□□□ -0.58
CRLF3-203ENST00000578692 IGHV3OR16-12A0A075B7B8 117 aa11.41□□□□□ -0.58
CRLF3-203ENST00000578692 DEFB131BA0A096LNP1 70 aa11.41□□□□□ -0.58
CRLF3-203ENST00000578692 A0A0J9YX75 114 aa11.41□□□□□ -0.58
CRLF3-203ENST00000578692 F6UB75 175 aa11.41□□□□□ -0.58
CRLF3-203ENST00000578692 PSG9Q00887 426 aa11.41□□□□□ -0.58
CRLF3-203ENST00000578692 C4orf46Q504U0 113 aa11.41□□□□□ -0.58
CRLF3-203ENST00000578692 ZNF709Q8N972 641 aa11.41□□□□□ -0.58
CRLF3-203ENST00000578692 SMIM8Q96KF7 97 aa11.41□□□□□ -0.58
CRLF3-203ENST00000578692 GPR82Q96P67 336 aa11.41□□□□□ -0.58
CRLF3-203ENST00000578692 RNF126Q9BV68 326 aa11.41□□□□□ -0.58
CRLF3-203ENST00000578692 SLC35B3Q9H1N7 401 aa11.41□□□□□ -0.58
CRLF3-203ENST00000578692 SMCO3A2RU48 225 aa11.4□□□□□ -0.59
CRLF3-203ENST00000578692 TMEM189A5PLL7 270 aa11.4□□□□□ -0.59
CRLF3-203ENST00000578692 PMS2P5A8MQ11 134 aa11.4□□□□□ -0.59
CRLF3-203ENST00000578692 SSSCA1O60232 199 aa11.4□□□□□ -0.59
CRLF3-203ENST00000578692 IL5P05113 134 aa11.4□□□□□ -0.59
CRLF3-203ENST00000578692 ANXA7P20073 488 aaKnown RBP11.4□□□□□ -0.59
CRLF3-203ENST00000578692 BTCP35070 178 aa11.4□□□□□ -0.59
CRLF3-203ENST00000578692 CYP2G1PQ6ZSU1 146 aa11.4□□□□□ -0.59
CRLF3-203ENST00000578692 C20orf173Q96LM9 149 aa11.4□□□□□ -0.59
CRLF3-203ENST00000578692 C17orf77Q96MU5 243 aa11.4□□□□□ -0.59
CRLF3-203ENST00000578692 C7orf50Q9BRJ6 194 aaKnown RBP11.4□□□□□ -0.59
CRLF3-203ENST00000578692 SPART-AS1P0CW21 52 aa11.39□□□□□ -0.59
CRLF3-203ENST00000578692 EMP1P54849 157 aa11.39□□□□□ -0.59
CRLF3-203ENST00000578692 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.39□□□□□ -0.59
CRLF3-203ENST00000578692 IL7P13232 177 aa11.38□□□□□ -0.59
CRLF3-203ENST00000578692 RAP2BP61225 183 aa11.38□□□□□ -0.59
CRLF3-203ENST00000578692 RRAS2P62070 204 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms