RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 CMC4P56277 68 aaPredicted RBP8.81□□□□□ -1
SEC22B-201ENST00000578049 TMEM95Q3KNT9 176 aa8.81□□□□□ -1
SEC22B-201ENST00000578049 TPTE2P1Q5T6R2 138 aa8.81□□□□□ -1
SEC22B-201ENST00000578049 C11orf68Q9H3H3 251 aaKnown RBP8.81□□□□□ -1
SEC22B-201ENST00000578049 PMS2P5A8MQ11 134 aa8.81□□□□□ -1
SEC22B-201ENST00000578049 KLF2Q9Y5W3 355 aaPredicted RBP8.81□□□□□ -1
SEC22B-201ENST00000578049 CNOT1A5YKK6 2376 aaKnown RBP8.81□□□□□ -1
SEC22B-201ENST00000578049 TRAV2A0A0B4J234 112 aa8.81□□□□□ -1
SEC22B-201ENST00000578049 IGLC2P0DOY2 106 aa8.81□□□□□ -1
SEC22B-201ENST00000578049 IGLC3P0DOY3 106 aa8.81□□□□□ -1
SEC22B-201ENST00000578049 CD28P10747 220 aa8.81□□□□□ -1
SEC22B-201ENST00000578049 ATP1A1-AS1Q5TC04 95 aa8.81□□□□□ -1
SEC22B-201ENST00000578049 COLCA1Q6ZS62 124 aa8.81□□□□□ -1
SEC22B-201ENST00000578049 NEGR1Q7Z3B1 354 aa8.81□□□□□ -1
SEC22B-201ENST00000578049 SNHG12Q9BXW3 62 aa8.81□□□□□ -1
SEC22B-201ENST00000578049 CKS1BP61024 79 aa8.8□□□□□ -1
SEC22B-201ENST00000578049 ZC2HC1BQ5TFG8 222 aa8.8□□□□□ -1
SEC22B-201ENST00000578049 LCN12Q6JVE5 192 aa8.8□□□□□ -1
SEC22B-201ENST00000578049 NUP37Q8NFH4 326 aa8.8□□□□□ -1
SEC22B-201ENST00000578049 CREBBPQ92793 2442 aa8.8□□□□□ -1
SEC22B-201ENST00000578049 TRBV20-1A0A075B6N2 111 aa8.8□□□□□ -1
SEC22B-201ENST00000578049 IGHV3-49A0A0A0MS15 119 aa8.8□□□□□ -1
SEC22B-201ENST00000578049 TIMM23O14925 209 aa8.8□□□□□ -1
SEC22B-201ENST00000578049 PAX8Q06710 450 aa8.8□□□□□ -1
SEC22B-201ENST00000578049 C18orf32Q8TCD1 76 aa8.8□□□□□ -1
SEC22B-201ENST00000578049 NPIPB5A8MRT5 1133 aa8.8□□□□□ -1
SEC22B-201ENST00000578049 RNASE2P10153 161 aaKnown RBP8.8□□□□□ -1
SEC22B-201ENST00000578049 Q86TA4 180 aa8.8□□□□□ -1
SEC22B-201ENST00000578049 NPFFR1Q9GZQ6 430 aa8.8□□□□□ -1
SEC22B-201ENST00000578049 ABHD17AQ96GS6 310 aa8.8□□□□□ -1
SEC22B-201ENST00000578049 C1orf147Q96MC9 270 aaPredicted RBP8.8□□□□□ -1
SEC22B-201ENST00000578049 DMRTA2Q96SC8 542 aa8.8□□□□□ -1
SEC22B-201ENST00000578049 SLX1AQ9BQ83 275 aa8.8□□□□□ -1
SEC22B-201ENST00000578049 OCIAD2Q56VL3 154 aa8.8□□□□□ -1
SEC22B-201ENST00000578049 OR10W1Q8NGF6 305 aa8.8□□□□□ -1
SEC22B-201ENST00000578049 C11orf52Q96A22 123 aa8.8□□□□□ -1
SEC22B-201ENST00000578049 IGHV1-8P0DP01 117 aa8.79□□□□□ -1
SEC22B-201ENST00000578049 CD300EQ496F6 205 aaPredicted RBP8.79□□□□□ -1
SEC22B-201ENST00000578049 Q6ZRM9 215 aa8.79□□□□□ -1
SEC22B-201ENST00000578049 LIME1Q9H400 295 aa8.79□□□□□ -1
SEC22B-201ENST00000578049 INTS1Q8N201 2190 aaKnown RBP8.79□□□□□ -1
SEC22B-201ENST00000578049 H0YJW9 148 aa8.79□□□□□ -1
SEC22B-201ENST00000578049 LMO1P25800 156 aa8.79□□□□□ -1
SEC22B-201ENST00000578049 SIGLEC15Q6ZMC9 328 aa8.79□□□□□ -1
SEC22B-201ENST00000578049 LINC01587Q99440 93 aa8.79□□□□□ -1
SEC22B-201ENST00000578049 hDV102S1A0JD36 115 aa8.79□□□□□ -1
SEC22B-201ENST00000578049 IGHV3-23P01764 117 aa8.79□□□□□ -1
SEC22B-201ENST00000578049 LGALS1P09382 135 aaKnown RBP8.79□□□□□ -1
SEC22B-201ENST00000578049 GTSCR1Q86UQ5 136 aa8.79□□□□□ -1
SEC22B-201ENST00000578049 CHAC1Q9BUX1 264 aa8.79□□□□□ -1
SEC22B-201ENST00000578049 S4R3C0 116 aa8.79□□□□□ -1
SEC22B-201ENST00000578049 A0A087X0K7 114 aa8.79□□□□□ -1
SEC22B-201ENST00000578049 LINC00473A8K010 186 aa8.79□□□□□ -1
SEC22B-201ENST00000578049 IGKV3-20P01619 116 aa8.79□□□□□ -1
SEC22B-201ENST00000578049 COA6Q5JTJ3 125 aaKnown RBP8.79□□□□□ -1
SEC22B-201ENST00000578049 ZNF562Q6V9R5 426 aa8.79□□□□□ -1
SEC22B-201ENST00000578049 TET1Q8NFU7 2136 aa8.79□□□□□ -1
SEC22B-201ENST00000578049 LYPD6BQ8NI32 183 aa8.79□□□□□ -1
SEC22B-201ENST00000578049 IGHV2-26A0A0B4J1V2 119 aa8.78□□□□□ -1
SEC22B-201ENST00000578049 Q5PR19 223 aa8.78□□□□□ -1
SEC22B-201ENST00000578049 TOMM7Q9P0U1 55 aa8.78□□□□□ -1
SEC22B-201ENST00000578049 A0A0G2JRQ6 117 aa8.78□□□□□ -1
SEC22B-201ENST00000578049 ZNF329Q86UD4 541 aa8.78□□□□□ -1
SEC22B-201ENST00000578049 IGHV3-66A0A0C4DH42 116 aa8.78□□□□□ -1
SEC22B-201ENST00000578049 IGHV4-39P01824 125 aa8.78□□□□□ -1
SEC22B-201ENST00000578049 BOD1L2Q8IYS8 172 aa8.78□□□□□ -1
SEC22B-201ENST00000578049 TRIOBPQ9H2D6 2365 aa8.78□□□□□ -1
SEC22B-201ENST00000578049 LTBRP36941 435 aa8.78□□□□□ -1
SEC22B-201ENST00000578049 LINC01560Q8TB33 94 aa8.78□□□□□ -1
SEC22B-201ENST00000578049 SCRT1Q9BWW7 348 aa8.78□□□□□ -1
SEC22B-201ENST00000578049 DTX1Q86Y01 620 aa8.78□□□□□ -1
SEC22B-201ENST00000578049 CD177Q8N6Q3 437 aa8.78□□□□□ -1
SEC22B-201ENST00000578049 CST9LQ9H4G1 147 aa8.78□□□□□ -1
SEC22B-201ENST00000578049 ARHGEF17Q96PE2 2063 aaPredicted RBP8.78□□□□□ -1
SEC22B-201ENST00000578049 E9PLN8 166 aa8.77□□□□□ -1
SEC22B-201ENST00000578049 SH2D1AO60880 128 aa8.77□□□□□ -1.01
SEC22B-201ENST00000578049 IL15RAQ13261 267 aa8.77□□□□□ -1.01
SEC22B-201ENST00000578049 RASL10AQ92737 203 aa8.77□□□□□ -1.01
SEC22B-201ENST00000578049 SHANK2-AS3Q9BTD1 123 aa8.77□□□□□ -1.01
SEC22B-201ENST00000578049 IGHV1-3A0A0C4DH29 117 aa8.77□□□□□ -1.01
SEC22B-201ENST00000578049 IGKV3OR2-268A0A0C4DH90 116 aa8.77□□□□□ -1.01
SEC22B-201ENST00000578049 M0R1W7 72 aa8.77□□□□□ -1.01
SEC22B-201ENST00000578049 TAL2Q16559 108 aa8.77□□□□□ -1.01
SEC22B-201ENST00000578049 PRSS22Q9GZN4 317 aa8.77□□□□□ -1.01
SEC22B-201ENST00000578049 TMEM75Q8N9X5 138 aa8.77□□□□□ -1.01
SEC22B-201ENST00000578049 LRRK1Q38SD2 2015 aa8.77□□□□□ -1.01
SEC22B-201ENST00000578049 TRBV7-1A0A0A6YYK4 115 aa8.77□□□□□ -1.01
SEC22B-201ENST00000578049 TGFAP01135 160 aa8.77□□□□□ -1.01
SEC22B-201ENST00000578049 TDGF1P13385 188 aa8.77□□□□□ -1.01
SEC22B-201ENST00000578049 C5orf64Q2M2E5 130 aa8.77□□□□□ -1.01
SEC22B-201ENST00000578049 FAM168AQ92567 244 aa8.77□□□□□ -1.01
SEC22B-201ENST00000578049 CRPP02741 224 aa8.77□□□□□ -1.01
SEC22B-201ENST00000578049 EXOC3-AS1Q8N2X6 119 aa8.77□□□□□ -1.01
SEC22B-201ENST00000578049 CCL19Q99731 98 aa8.77□□□□□ -1.01
SEC22B-201ENST00000578049 TRGV2A0A075B6R0 118 aa8.76□□□□□ -1.01
SEC22B-201ENST00000578049 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.76□□□□□ -1.01
SEC22B-201ENST00000578049 NDUFB8O95169 186 aa8.76□□□□□ -1.01
SEC22B-201ENST00000578049 EVI2AP22794 236 aa8.76□□□□□ -1.01
SEC22B-201ENST00000578049 ZCCHC24Q8N2G6 241 aaKnown RBP8.76□□□□□ -1.01
SEC22B-201ENST00000578049 SPANXCQ9NY87 97 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms