RNA–Protein interactions for RNA: ENST00000577706.1

TOP2A-203, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-203ENST00000577706 AQP3Q92482 292 aa1.71□□□□□ -2.14
TOP2A-203ENST00000577706 SDF2Q99470 211 aa1.71□□□□□ -2.14
TOP2A-203ENST00000577706 GINS4Q9BRT9 223 aa1.71□□□□□ -2.14
TOP2A-203ENST00000577706 LXNQ9BS40 222 aa1.71□□□□□ -2.14
TOP2A-203ENST00000577706 CST9LQ9H4G1 147 aa1.71□□□□□ -2.14
TOP2A-203ENST00000577706 FAM135BQ49AJ0 1406 aa1.71□□□□□ -2.14
TOP2A-203ENST00000577706 KDM5CP41229 1560 aa1.71□□□□□ -2.14
TOP2A-203ENST00000577706 ZCCHC11Q5TAX3 1644 aaKnown RBP1.7□□□□□ -2.14
TOP2A-203ENST00000577706 TRBV7-6A0A0J9YX20 115 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 A0A1W2PQD3 144 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 IRGMA1A4Y4 181 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 C11orf86A6NJI1 115 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 C17orf51A8MQB3 221 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 ZNF727A8MUV8 499 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 C3orf84H3BNL1 204 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 SLC22A1O15245 554 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 TSPAN19P0C672 248 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 RPL22P35268 128 aaKnown RBP1.7□□□□□ -2.14
TOP2A-203ENST00000577706 XCL1P47992 114 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 DYNLT1P63172 113 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 SELENOWP63302 87 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 MED1Q15648 1581 aaPredicted RBP1.7□□□□□ -2.14
TOP2A-203ENST00000577706 RNASE10Q5GAN6 216 aaKnown RBP1.7□□□□□ -2.14
TOP2A-203ENST00000577706 TMEM69Q5SWH9 247 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 NCMAPQ5T1S8 102 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 FAM27BQ5VT28 67 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 C7orf65Q6ZTY9 151 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 C3orf62Q6ZUJ4 267 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 SMG6Q86US8 1419 aaKnown RBP1.7□□□□□ -2.14
TOP2A-203ENST00000577706 LINC00311Q8N616 119 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 OR5H6Q8NGV6 325 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 PFN4Q8NHR9 129 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 SMCR5Q8TEV8 140 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 ZNF714Q96N38 554 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 MIEN1Q9BRT3 115 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 COMMD3Q9UBI1 195 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 LAMTOR3Q9UHA4 124 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 TRAPPC8Q9Y2L5 1435 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 TRAPPC1Q9Y5R8 145 aa1.7□□□□□ -2.14
TOP2A-203ENST00000577706 XIRP1Q702N8 1843 aaKnown RBP1.7□□□□□ -2.14
TOP2A-203ENST00000577706 MRC2Q9UBG0 1479 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 PTPRTO14522 1441 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 ARHGAP31Q2M1Z3 1444 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 ATAD5Q96QE3 1844 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 KIAA1671Q9BY89 1806 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 TRAV40A0A0B4J280 105 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 C20orf202A1L168 122 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 CORTO00230 105 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 RER1O15258 196 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 CCL25O15444 150 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 NDUFB2O95178 105 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 CLPSP04118 112 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 GPX1P07203 203 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 METTL15P1P0C7V9 234 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 RNASE2P10153 161 aaKnown RBP1.69□□□□□ -2.14
TOP2A-203ENST00000577706 FGF7P21781 194 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 AKR1C2P52895 323 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 FOXA1P55317 472 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 FXYD7P58549 80 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 YPEL3P61236 119 aaPredicted RBP1.69□□□□□ -2.14
TOP2A-203ENST00000577706 ZNF816Q0VGE8 651 aaPredicted RBP1.69□□□□□ -2.14
TOP2A-203ENST00000577706 MIAQ16674 131 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 KHDC3LQ587J8 217 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 PRR9Q5T870 116 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 C22orf39Q6P5X5 142 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 ZNF880Q6PDB4 577 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 Q8IYB0 196 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 Q8NAQ8 132 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 Q8NDZ9 215 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 BPIFB6Q8NFQ5 453 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 OR10P1Q8NGE3 313 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 OR5D14Q8NGL3 314 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 NAT14Q8WUY8 206 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 TMEM106AQ96A25 262 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 RNF122Q9H9V4 155 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 LSM2Q9Y333 95 aaKnown RBP1.69□□□□□ -2.14
TOP2A-203ENST00000577706 MYH2Q9UKX2 1941 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 TOPBP1Q92547 1522 aa1.69□□□□□ -2.14
TOP2A-203ENST00000577706 TCOF1Q13428 1488 aaKnown RBP1.69□□□□□ -2.14
TOP2A-203ENST00000577706 DISP2A7MBM2 1401 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 MAST2Q6P0Q8 1798 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 IGKV1D-42A0A075B6H8 117 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 IGHV3-15A0A0B4J1V0 119 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 TRBV27A0A0K0K1C4 114 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 J3QR89 54 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 HIST1H2BKO60814 126 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 HIST1H2BJP06899 126 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 CD14P08571 375 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 NDUFA6P56556 154 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 LGALSLQ3ZCW2 172 aaPredicted RBP1.68□□□□□ -2.14
TOP2A-203ENST00000577706 MEIG1Q5JSS6 88 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 CLLU1Q5K131 121 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 LCN15Q6UWW0 184 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 PHF5AQ7RTV0 110 aaKnown RBP1.68□□□□□ -2.14
TOP2A-203ENST00000577706 TCTEX1D1Q8N7M0 179 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 ST20-AS1Q8NBB2 130 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.68□□□□□ -2.14
TOP2A-203ENST00000577706 MORN4Q8NDC4 146 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 PRELID3AQ96N28 172 aa1.68□□□□□ -2.14
TOP2A-203ENST00000577706 SCGB3A1Q96QR1 104 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms