RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 ADGBQ8N7X0 1667 aa3.66□□□□□ -1.82
CALCOCO2-226ENST00000575461 TIMM17BO60830 172 aa3.66□□□□□ -1.82
CALCOCO2-226ENST00000575461 PROSCO94903 275 aa3.66□□□□□ -1.82
CALCOCO2-226ENST00000575461 MGST1P10620 155 aaKnown RBP3.66□□□□□ -1.82
CALCOCO2-226ENST00000575461 GPX2P18283 190 aa3.66□□□□□ -1.82
CALCOCO2-226ENST00000575461 SURF2Q15527 256 aaPredicted RBP3.66□□□□□ -1.82
CALCOCO2-226ENST00000575461 ALX1Q15699 326 aa3.66□□□□□ -1.82
CALCOCO2-226ENST00000575461 DOCK4Q8N1I0 1966 aa3.65□□□□□ -1.82
CALCOCO2-226ENST00000575461 TECPR2O15040 1411 aa3.65□□□□□ -1.83
CALCOCO2-226ENST00000575461 TRAV1-1A0A0B4J248 108 aa3.65□□□□□ -1.83
CALCOCO2-226ENST00000575461 PRR15Q8IV56 129 aa3.65□□□□□ -1.83
CALCOCO2-226ENST00000575461 OR9Q1Q8NGQ5 310 aa3.65□□□□□ -1.83
CALCOCO2-226ENST00000575461 THEM6Q8WUY1 208 aa3.65□□□□□ -1.83
CALCOCO2-226ENST00000575461 BORCS8Q96FH0 119 aa3.65□□□□□ -1.83
CALCOCO2-226ENST00000575461 TMBIM6P55061 237 aa3.64□□□□□ -1.83
CALCOCO2-226ENST00000575461 C14orf132Q9NPU4 83 aa3.64□□□□□ -1.83
CALCOCO2-226ENST00000575461 BATF3Q9NR55 127 aa3.64□□□□□ -1.83
CALCOCO2-226ENST00000575461 SPANXA1Q9NS26 97 aa3.64□□□□□ -1.83
CALCOCO2-226ENST00000575461 TRDV1A0A1B0GX56 115 aa3.63□□□□□ -1.83
CALCOCO2-226ENST00000575461 UBL3O95164 117 aa3.63□□□□□ -1.83
CALCOCO2-226ENST00000575461 GADD45GO95257 159 aa3.63□□□□□ -1.83
CALCOCO2-226ENST00000575461 GPX1P07203 203 aa3.63□□□□□ -1.83
CALCOCO2-226ENST00000575461 CXCL1P09341 107 aa3.63□□□□□ -1.83
CALCOCO2-226ENST00000575461 BCL2P10415 239 aa3.63□□□□□ -1.83
CALCOCO2-226ENST00000575461 ARPP19P56211 112 aa3.63□□□□□ -1.83
CALCOCO2-226ENST00000575461 CARD19Q96LW7 228 aa3.63□□□□□ -1.83
CALCOCO2-226ENST00000575461 OR2H1Q9GZK4 316 aa3.63□□□□□ -1.83
CALCOCO2-226ENST00000575461 ASB4Q9Y574 426 aa3.63□□□□□ -1.83
CALCOCO2-226ENST00000575461 COL5A1P20908 1838 aaPredicted RBP3.63□□□□□ -1.83
CALCOCO2-226ENST00000575461 NUMA1Q14980 2115 aa3.62□□□□□ -1.83
CALCOCO2-226ENST00000575461 CEP164Q9UPV0 1460 aa3.62□□□□□ -1.83
CALCOCO2-226ENST00000575461 ICE1Q9Y2F5 2266 aa3.62□□□□□ -1.83
CALCOCO2-226ENST00000575461 TRAV3A0A0B4J244 114 aa3.62□□□□□ -1.83
CALCOCO2-226ENST00000575461 CST7O76096 145 aa3.62□□□□□ -1.83
CALCOCO2-226ENST00000575461 CRPP02741 224 aa3.62□□□□□ -1.83
CALCOCO2-226ENST00000575461 ASAH2BP0C7U1 165 aa3.62□□□□□ -1.83
CALCOCO2-226ENST00000575461 DEFB103AP81534 67 aa3.62□□□□□ -1.83
CALCOCO2-226ENST00000575461 RNASE10Q5GAN6 216 aaKnown RBP3.62□□□□□ -1.83
CALCOCO2-226ENST00000575461 COA5Q86WW8 74 aa3.62□□□□□ -1.83
CALCOCO2-226ENST00000575461 RPS19BP1Q86WX3 136 aaKnown RBP3.62□□□□□ -1.83
CALCOCO2-226ENST00000575461 C12orf29Q8N999 325 aa3.62□□□□□ -1.83
CALCOCO2-226ENST00000575461 LINC00301Q8NCQ3 95 aa3.62□□□□□ -1.83
CALCOCO2-226ENST00000575461 ODAMA1E959 279 aa3.61□□□□□ -1.83
CALCOCO2-226ENST00000575461 IFNA4P05014 189 aa3.61□□□□□ -1.83
CALCOCO2-226ENST00000575461 SSR2P43308 183 aa3.61□□□□□ -1.83
CALCOCO2-226ENST00000575461 ZNF418Q8TF45 676 aaPredicted RBP3.61□□□□□ -1.83
CALCOCO2-226ENST00000575461 C6orf62Q9GZU0 229 aaPredicted RBP3.61□□□□□ -1.83
CALCOCO2-226ENST00000575461 MDC1Q14676 2089 aaKnown RBP3.61□□□□□ -1.83
CALCOCO2-226ENST00000575461 HIST1H2BKO60814 126 aa3.6□□□□□ -1.83
CALCOCO2-226ENST00000575461 HIST1H2BJP06899 126 aa3.6□□□□□ -1.83
CALCOCO2-226ENST00000575461 ZNF705BP0CI00 300 aaPredicted RBP3.6□□□□□ -1.83
CALCOCO2-226ENST00000575461 PHF5AQ7RTV0 110 aaKnown RBP3.6□□□□□ -1.83
CALCOCO2-226ENST00000575461 ZNF714Q96N38 554 aa3.6□□□□□ -1.83
CALCOCO2-226ENST00000575461 AIF1LQ9BQI0 150 aa3.6□□□□□ -1.83
CALCOCO2-226ENST00000575461 OTORQ9NRC9 128 aa3.6□□□□□ -1.83
CALCOCO2-226ENST00000575461 NUP210LQ5VU65 1888 aa3.6□□□□□ -1.83
CALCOCO2-226ENST00000575461 SCGB1A1P11684 91 aa3.59□□□□□ -1.83
CALCOCO2-226ENST00000575461 POLR2HP52434 150 aaKnown RBP3.59□□□□□ -1.83
CALCOCO2-226ENST00000575461 MSMO1Q15800 293 aa3.59□□□□□ -1.83
CALCOCO2-226ENST00000575461 FP248Q71RG6 208 aaPredicted RBP3.59□□□□□ -1.83
CALCOCO2-226ENST00000575461 LINC00311Q8N616 119 aa3.59□□□□□ -1.83
CALCOCO2-226ENST00000575461 CCDC115Q96NT0 180 aa3.59□□□□□ -1.83
CALCOCO2-226ENST00000575461 LOC105371267A0A1B0GV96 52 aa3.58□□□□□ -1.84
CALCOCO2-226ENST00000575461 H7BYZ3 331 aa3.58□□□□□ -1.84
CALCOCO2-226ENST00000575461 S100A11P31949 105 aa3.58□□□□□ -1.84
CALCOCO2-226ENST00000575461 HBBP68871 147 aa3.58□□□□□ -1.84
CALCOCO2-226ENST00000575461 EIF3IQ13347 325 aaKnown RBP3.58□□□□□ -1.84
CALCOCO2-226ENST00000575461 KRTAP6-3Q3LI67 103 aa3.58□□□□□ -1.84
CALCOCO2-226ENST00000575461 PATE2Q6UY27 113 aa3.58□□□□□ -1.84
CALCOCO2-226ENST00000575461 Q6ZRN7 208 aaPredicted RBP3.58□□□□□ -1.84
CALCOCO2-226ENST00000575461 Q8IYB0 196 aa3.58□□□□□ -1.84
CALCOCO2-226ENST00000575461 TMEM35BQ8NCS4 154 aa3.58□□□□□ -1.84
CALCOCO2-226ENST00000575461 CACYBPQ9HB71 228 aaKnown RBP3.58□□□□□ -1.84
CALCOCO2-226ENST00000575461 OR5AC2Q9NZP5 309 aa3.58□□□□□ -1.84
CALCOCO2-226ENST00000575461 NAT8BQ9UHF3 227 aa3.58□□□□□ -1.84
CALCOCO2-226ENST00000575461 RNF11Q9Y3C5 154 aa3.58□□□□□ -1.84
CALCOCO2-226ENST00000575461 MED31Q9Y3C7 131 aa3.58□□□□□ -1.84
CALCOCO2-226ENST00000575461 LY96Q9Y6Y9 160 aa3.58□□□□□ -1.84
CALCOCO2-226ENST00000575461 ARL5CA6NH57 179 aa3.57□□□□□ -1.84
CALCOCO2-226ENST00000575461 RPL35P42766 123 aaKnown RBP3.57□□□□□ -1.84
CALCOCO2-226ENST00000575461 TAF1LQ8IZX4 1826 aa3.57□□□□□ -1.84
CALCOCO2-226ENST00000575461 OR5D16Q8NGK9 328 aa3.57□□□□□ -1.84
CALCOCO2-226ENST00000575461 ZFHX2Q9C0A1 2572 aaPredicted RBP3.57□□□□□ -1.84
CALCOCO2-226ENST00000575461 TCEAL2Q9H3H9 227 aaPredicted RBP3.57□□□□□ -1.84
CALCOCO2-226ENST00000575461 KRTAP13-4Q3LI77 160 aa3.56□□□□□ -1.84
CALCOCO2-226ENST00000575461 ST6GALNAC3Q8NDV1 305 aa3.56□□□□□ -1.84
CALCOCO2-226ENST00000575461 NUP98P52948 1817 aa3.56□□□□□ -1.84
CALCOCO2-226ENST00000575461 CACNA1GO43497 2377 aa3.55□□□□□ -1.84
CALCOCO2-226ENST00000575461 FHAD1B1AJZ9 1412 aa3.55□□□□□ -1.84
CALCOCO2-226ENST00000575461 BCL9O00512 1426 aa3.55□□□□□ -1.84
CALCOCO2-226ENST00000575461 TRAPPC8Q9Y2L5 1435 aa3.55□□□□□ -1.84
CALCOCO2-226ENST00000575461 TRAV14DV4A0A0A6YYC5 116 aa3.55□□□□□ -1.84
CALCOCO2-226ENST00000575461 TRAV12-1A0A0B4J245 112 aa3.55□□□□□ -1.84
CALCOCO2-226ENST00000575461 GABARAPH6UMI1 98 aa3.55□□□□□ -1.84
CALCOCO2-226ENST00000575461 OR1I1O60431 355 aa3.55□□□□□ -1.84
CALCOCO2-226ENST00000575461 RPL7P18124 248 aaKnown RBP3.55□□□□□ -1.84
CALCOCO2-226ENST00000575461 RAB4BP61018 213 aa3.55□□□□□ -1.84
CALCOCO2-226ENST00000575461 PDE6HQ13956 83 aa3.55□□□□□ -1.84
CALCOCO2-226ENST00000575461 OR4K15Q8NH41 348 aa3.55□□□□□ -1.84
CALCOCO2-226ENST00000575461 Q96M85 177 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms