RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 APOA1P02647 267 aa6.27□□□□□ -1.41
SMG6-218ENST00000575454 GPX4P36969 197 aaPredicted RBP6.27□□□□□ -1.41
SMG6-218ENST00000575454 NMSQ5H8A3 153 aa6.27□□□□□ -1.41
SMG6-218ENST00000575454 CDPF1Q6NVV7 123 aa6.27□□□□□ -1.41
SMG6-218ENST00000575454 LHFPL1Q86WI0 220 aa6.27□□□□□ -1.41
SMG6-218ENST00000575454 SNX29P2Q8IUI4 249 aa6.27□□□□□ -1.41
SMG6-218ENST00000575454 LYPD1Q8N2G4 141 aa6.27□□□□□ -1.41
SMG6-218ENST00000575454 TMEM256Q8N2U0 113 aa6.27□□□□□ -1.41
SMG6-218ENST00000575454 OR10J6PQ8NGY7 276 aa6.27□□□□□ -1.41
SMG6-218ENST00000575454 TERB2Q8NHR7 220 aa6.27□□□□□ -1.41
SMG6-218ENST00000575454 RBPMSQ93062 196 aaKnown RBP6.27□□□□□ -1.41
SMG6-218ENST00000575454 UPK3BQ9BT76 320 aa6.27□□□□□ -1.41
SMG6-218ENST00000575454 TMEM222Q9H0R3 208 aa6.27□□□□□ -1.41
SMG6-218ENST00000575454 Q9H521 79 aa6.27□□□□□ -1.41
SMG6-218ENST00000575454 CACNG5Q9UF02 275 aa6.27□□□□□ -1.41
SMG6-218ENST00000575454 A0A0G2JRQ6 117 aa6.26□□□□□ -1.41
SMG6-218ENST00000575454 TEX13DA0A0J9YY54 714 aaPredicted RBP6.26□□□□□ -1.41
SMG6-218ENST00000575454 TNFAIP8O95379 198 aa6.26□□□□□ -1.41
SMG6-218ENST00000575454 RPS19P39019 145 aaKnown RBP6.26□□□□□ -1.41
SMG6-218ENST00000575454 TAS2R60P59551 318 aa6.26□□□□□ -1.41
SMG6-218ENST00000575454 LYZP61626 148 aa6.26□□□□□ -1.41
SMG6-218ENST00000575454 AMTNQ6UX39 209 aa6.26□□□□□ -1.41
SMG6-218ENST00000575454 ZNF493Q6ZR52 646 aa6.26□□□□□ -1.41
SMG6-218ENST00000575454 LGI3Q8N145 548 aa6.26□□□□□ -1.41
SMG6-218ENST00000575454 TMEM170AQ8WVE7 144 aa6.26□□□□□ -1.41
SMG6-218ENST00000575454 GNPNAT1Q96EK6 184 aaPredicted RBP6.26□□□□□ -1.41
SMG6-218ENST00000575454 SLC35E1Q96K37 410 aa6.26□□□□□ -1.41
SMG6-218ENST00000575454 GPR82Q96P67 336 aa6.26□□□□□ -1.41
SMG6-218ENST00000575454 SLC45A2Q9UMX9 530 aa6.26□□□□□ -1.41
SMG6-218ENST00000575454 TIMM8BQ9Y5J9 83 aaPredicted RBP6.26□□□□□ -1.41
SMG6-218ENST00000575454 FLG2Q5D862 2391 aaPredicted RBP6.26□□□□□ -1.41
SMG6-218ENST00000575454 VPS13BQ7Z7G8 4022 aa6.26□□□□□ -1.41
SMG6-218ENST00000575454 CD3DP04234 171 aa6.25□□□□□ -1.41
SMG6-218ENST00000575454 ZNF182P17025 639 aaPredicted RBP6.25□□□□□ -1.41
SMG6-218ENST00000575454 M6PRP20645 277 aa6.25□□□□□ -1.41
SMG6-218ENST00000575454 CNN1P51911 297 aaKnown RBP6.25□□□□□ -1.41
SMG6-218ENST00000575454 ZNF90Q03938 601 aa6.25□□□□□ -1.41
SMG6-218ENST00000575454 OR5I1Q13606 314 aa6.25□□□□□ -1.41
SMG6-218ENST00000575454 GGNBP1Q5YKI7 109 aa6.25□□□□□ -1.41
SMG6-218ENST00000575454 OR11H7Q8NGC8 314 aa6.25□□□□□ -1.41
SMG6-218ENST00000575454 OR4D5Q8NGN0 318 aa6.25□□□□□ -1.41
SMG6-218ENST00000575454 OR1B1Q8NGR6 318 aa6.25□□□□□ -1.41
SMG6-218ENST00000575454 OR13C8Q8NGS7 320 aa6.25□□□□□ -1.41
SMG6-218ENST00000575454 RXFP4Q8TDU9 374 aa6.25□□□□□ -1.41
SMG6-218ENST00000575454 C16orf74Q96GX8 76 aa6.25□□□□□ -1.41
SMG6-218ENST00000575454 LINC01587Q99440 93 aa6.25□□□□□ -1.41
SMG6-218ENST00000575454 RSG1Q9BU20 258 aa6.25□□□□□ -1.41
SMG6-218ENST00000575454 PPP1R14DQ9NXH3 145 aa6.25□□□□□ -1.41
SMG6-218ENST00000575454 COMMD3Q9UBI1 195 aa6.25□□□□□ -1.41
SMG6-218ENST00000575454 C14orf166Q9Y224 244 aaKnown RBP6.25□□□□□ -1.41
SMG6-218ENST00000575454 H3BNG1 76 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 M0R2Z0 102 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 CRXO43186 299 aaPredicted RBP6.24□□□□□ -1.41
SMG6-218ENST00000575454 IFNA5P01569 189 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 OR5AC1P0C628 307 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 SULT1A3P0DMM9 295 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 SULT1A4P0DMN0 295 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 AZU1P20160 251 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 ERVFC1-1P60608 527 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 DLK1P80370 383 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 GAMTQ14353 236 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 FCN2Q15485 313 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 NEDD8Q15843 81 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 SPINK13Q1W4C9 94 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 SCGB2B2Q4G0G5 96 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 Q5VSD8 79 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 TMEM268Q5VZI3 342 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 TMEM144Q7Z5S9 345 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 SELENOHQ8IZQ5 122 aaKnown RBP6.24□□□□□ -1.41
SMG6-218ENST00000575454 DTD1Q8TEA8 209 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 GLYATL2Q8WU03 294 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 C15orf40Q8WUR7 153 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 C20orf173Q96LM9 149 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 TRGV9Q99603 122 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 KRTAP1-5Q9BYS1 174 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 NAA60Q9H7X0 242 aa6.24□□□□□ -1.41
SMG6-218ENST00000575454 MRPS16Q9Y3D3 137 aaKnown RBP6.24□□□□□ -1.41
SMG6-218ENST00000575454 IGKV1D-37A0A075B6S9 117 aa6.23□□□□□ -1.41
SMG6-218ENST00000575454 TRAV26-1A0A087WT03 109 aa6.23□□□□□ -1.41
SMG6-218ENST00000575454 PIGBOS1A0A0B4J2F0 54 aa6.23□□□□□ -1.41
SMG6-218ENST00000575454 PLAC8L1A1L4L8 177 aa6.23□□□□□ -1.41
SMG6-218ENST00000575454 ANKRD65E5RJM6 399 aa6.23□□□□□ -1.41
SMG6-218ENST00000575454 FAM229AH3BQW9 127 aa6.23□□□□□ -1.41
SMG6-218ENST00000575454 BOLA2-SMG1P6H3BVE0 249 aa6.23□□□□□ -1.41
SMG6-218ENST00000575454 PRM2P04554 102 aa6.23□□□□□ -1.41
SMG6-218ENST00000575454 HTN1P15515 57 aa6.23□□□□□ -1.41
SMG6-218ENST00000575454 CCR6P51684 374 aa6.23□□□□□ -1.41
SMG6-218ENST00000575454 XGP55808 180 aa6.23□□□□□ -1.41
SMG6-218ENST00000575454 SURF2Q15527 256 aaPredicted RBP6.23□□□□□ -1.41
SMG6-218ENST00000575454 IL22RA2Q969J5 263 aa6.23□□□□□ -1.41
SMG6-218ENST00000575454 NOP10Q9NPE3 64 aaKnown RBP6.23□□□□□ -1.41
SMG6-218ENST00000575454 HSPB7Q9UBY9 170 aa6.23□□□□□ -1.41
SMG6-218ENST00000575454 MTFP1Q9UDX5 166 aa6.23□□□□□ -1.41
SMG6-218ENST00000575454 KCNIP3Q9Y2W7 256 aa6.23□□□□□ -1.41
SMG6-218ENST00000575454 TMEM56-RWDD3S4R434 201 aa6.23□□□□□ -1.41
SMG6-218ENST00000575454 ZNF98A6NK75 572 aa6.22□□□□□ -1.41
SMG6-218ENST00000575454 H7BYZ3 331 aa6.22□□□□□ -1.41
SMG6-218ENST00000575454 ELK1P19419 428 aa6.22□□□□□ -1.41
SMG6-218ENST00000575454 LINC00315P59091 139 aa6.22□□□□□ -1.41
SMG6-218ENST00000575454 TAS2R19P59542 299 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms