RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 IGF2BP2-AS1Q96M15 143 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 ELOVL1Q9BW60 279 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 MRPL36Q9P0J6 103 aaKnown RBP5.37□□□□□ -1.55
SMG6-217ENST00000575338 RABAC1Q9UI14 185 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 TRAPPC1Q9Y5R8 145 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 WNK2Q9Y3S1 2297 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 NBASA2RRP1 2371 aa5.37□□□□□ -1.55
SMG6-217ENST00000575338 TRAV40A0A0B4J280 105 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 IGHV4-61A0A0C4DH41 118 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 ZNF705GA8MUZ8 300 aaPredicted RBP5.36□□□□□ -1.55
SMG6-217ENST00000575338 GATCO43716 136 aaKnown RBP5.36□□□□□ -1.55
SMG6-217ENST00000575338 HIST1H2BKO60814 126 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 ZNF253O75346 499 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 BRI3O95415 125 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 IGKV1-17P01599 117 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 HIST1H2BJP06899 126 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 HIST1H2BOP23527 126 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 CD24P25063 80 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 HIST1H2BBP33778 126 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 MYCNOSP40205 109 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 HIST1H2BDP58876 126 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 HIST1H2BCP62807 126 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 S100A12P80511 92 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 HIST2H2BEQ16778 126 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 CLEC12BQ2HXU8 276 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 CT83Q5H943 113 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 ACTL10Q5JWF8 245 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.36□□□□□ -1.55
SMG6-217ENST00000575338 TMEM183AQ8IXX5 376 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 LRRC75A-AS1Q8N1F1 130 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 DYNAPQ8N1N2 210 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 C5orf56Q8N8D9 126 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 ZNF491Q8N8L2 437 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 LINC01356Q8N9X3 169 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 BLNKQ8WV28 456 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 HIST1H2BHQ93079 126 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 FANCD2OSQ96PS1 177 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 HIST1H2BNQ99877 126 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 HIST1H2BMQ99879 126 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 FAM103A1Q9BTL3 118 aaKnown RBP5.36□□□□□ -1.55
SMG6-217ENST00000575338 Q9H3A6 140 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 C7orf69Q9H7B7 122 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 BEX4Q9NWD9 120 aaPredicted RBP5.36□□□□□ -1.55
SMG6-217ENST00000575338 CLEC5AQ9NY25 188 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 FBXL7Q9UJT9 491 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 ZFP30Q9Y2G7 519 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 KLF12Q9Y4X4 402 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 DMRT1Q9Y5R6 373 aa5.36□□□□□ -1.55
SMG6-217ENST00000575338 SOX21Q9Y651 276 aaPredicted RBP5.36□□□□□ -1.55
SMG6-217ENST00000575338 KALRNO60229 2985 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 IGHV3-21A0A0B4J1V1 117 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 FAM231BA6NCW3 169 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 ZNF98A6NK75 572 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 OR2J3O76001 311 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 HLA-DQA1P01909 254 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 TCRAP04437 139 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 USF2Q15853 346 aaPredicted RBP5.35□□□□□ -1.55
SMG6-217ENST00000575338 ECSCRQ19T08 205 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 COA6Q5JTJ3 125 aaKnown RBP5.35□□□□□ -1.55
SMG6-217ENST00000575338 ASPHD1Q5U4P2 390 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 MORN5Q5VZ52 161 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 ATP5L2Q7Z4Y8 100 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 ZNF843Q8N446 348 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 TMEM75Q8N9X5 138 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 OR4B1Q8NGF8 309 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 FRZBQ92765 325 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 GRAMD2BQ96HH9 432 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 USMG5Q96IX5 58 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 C12orf57Q99622 126 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 GNB1LQ9BYB4 327 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 ZNF331Q9NQX6 463 aaPredicted RBP5.35□□□□□ -1.55
SMG6-217ENST00000575338 SERTAD4Q9NUC0 356 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 ZNF492Q9P255 531 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 NAT8BQ9UHF3 227 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 ZNF580Q9UK33 172 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 V9GYV3 84 aa5.35□□□□□ -1.55
SMG6-217ENST00000575338 TRBV19A0A075B6N1 114 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 IGHV4-30-2A0A087WSY4 118 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 TRAV41A0A0B4J266 112 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 SMIM27A0A1W2PRY6 76 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 IZUMO1RA6ND01 250 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 PGPEP1LA6NFU8 196 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 A8MWL6 223 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 K7EN84 100 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 ATP6V0E1O15342 81 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 LTAP01374 205 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 AMY1AP04745 511 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 CT45A10P0DMU9 189 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 IGLC2P0DOY2 106 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 HNF1AP20823 631 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 RHOGP84095 191 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 NDPQ00604 133 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 ATP5G2Q06055 141 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 LOXL1Q08397 574 aaPredicted RBP5.34□□□□□ -1.55
SMG6-217ENST00000575338 C15orf32Q32M92 178 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 DNLZQ5SXM8 178 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 C1orf194Q5T5A4 169 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 FAM162BQ5T6X4 162 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 PIP4P2Q8N4L2 257 aa5.34□□□□□ -1.55
SMG6-217ENST00000575338 OR5R1Q8NH85 324 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms