RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 MGST2Q99735 147 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 SLC25A32Q9H2D1 315 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 NRN1Q9NPD7 142 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 LYRM2Q9NU23 88 aaPredicted RBP6.34□□□□□ -1.39
SMG6-216ENST00000575176 RABAC1Q9UI14 185 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 SLC45A2Q9UMX9 530 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 A0A1W2PS18 150 aa6.33□□□□□ -1.4
SMG6-216ENST00000575176 SNRPGP15A8MWD9 76 aa6.33□□□□□ -1.4
SMG6-216ENST00000575176 SIX6O95475 246 aa6.33□□□□□ -1.4
SMG6-216ENST00000575176 LINC00869P0C866 280 aa6.33□□□□□ -1.4
SMG6-216ENST00000575176 RPL35AP18077 110 aaKnown RBP6.33□□□□□ -1.4
SMG6-216ENST00000575176 LYZP61626 148 aa6.33□□□□□ -1.4
SMG6-216ENST00000575176 RRAS2P62070 204 aaPredicted RBP6.33□□□□□ -1.4
SMG6-216ENST00000575176 SLC38A11Q08AI6 406 aa6.33□□□□□ -1.4
SMG6-216ENST00000575176 MORN5Q5VZ52 161 aa6.33□□□□□ -1.4
SMG6-216ENST00000575176 MZT2BQ6NZ67 158 aa6.33□□□□□ -1.4
SMG6-216ENST00000575176 CYP2G1PQ6ZSU1 146 aa6.33□□□□□ -1.4
SMG6-216ENST00000575176 ENKURQ8TC29 256 aa6.33□□□□□ -1.4
SMG6-216ENST00000575176 C20orf173Q96LM9 149 aa6.33□□□□□ -1.4
SMG6-216ENST00000575176 SCRT1Q9BWW7 348 aa6.33□□□□□ -1.4
SMG6-216ENST00000575176 TMEM231Q9H6L2 316 aa6.33□□□□□ -1.4
SMG6-216ENST00000575176 SEPSECSQ9HD40 501 aaKnown RBP6.33□□□□□ -1.4
SMG6-216ENST00000575176 TRAV8-2A0A0B4J237 113 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 FAM24AA6NFZ4 105 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 ZNF98A6NK75 572 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 KNCNA6PVL3 124 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 INMT-MINDY4F8WBC2 141 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 C3orf84H3BNL1 204 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 SCGB2A1O75556 95 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 DEDDO75618 318 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 BMI1P35226 326 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 PRR20EP86478 221 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 PRR20CP86479 221 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 PRR20DP86480 221 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 PRR20BP86481 221 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 PRR20AP86496 221 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 AKR1C1Q04828 323 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 C1orf194Q5T5A4 169 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 ZNF709Q8N972 641 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 SHANK2-AS3Q9BTD1 123 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 PBDC1Q9BVG4 233 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 OR5AC2Q9NZP5 309 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 GSKIPQ9P0R6 139 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 WDR83OSQ9Y284 106 aa6.32□□□□□ -1.4
SMG6-216ENST00000575176 LSM5Q9Y4Y9 91 aaKnown RBP6.32□□□□□ -1.4
SMG6-216ENST00000575176 HELTA6NFD8 242 aa6.31□□□□□ -1.4
SMG6-216ENST00000575176 UBE2CO00762 179 aa6.31□□□□□ -1.4
SMG6-216ENST00000575176 GOSR2O14653 212 aa6.31□□□□□ -1.4
SMG6-216ENST00000575176 PRAF2O60831 178 aa6.31□□□□□ -1.4
SMG6-216ENST00000575176 HLA-DRB4P13762 266 aa6.31□□□□□ -1.4
SMG6-216ENST00000575176 APOC4P55056 127 aa6.31□□□□□ -1.4
SMG6-216ENST00000575176 RPP30P78346 268 aaKnown RBP6.31□□□□□ -1.4
SMG6-216ENST00000575176 PSMG4Q5JS54 123 aa6.31□□□□□ -1.4
SMG6-216ENST00000575176 TMEM252Q8N6L7 170 aa6.31□□□□□ -1.4
SMG6-216ENST00000575176 Q8NAQ8 132 aa6.31□□□□□ -1.4
SMG6-216ENST00000575176 TMEM37Q8WXS4 190 aa6.31□□□□□ -1.4
SMG6-216ENST00000575176 UHRF2Q96PU4 802 aa6.31□□□□□ -1.4
SMG6-216ENST00000575176 GGACTQ9BVM4 153 aa6.31□□□□□ -1.4
SMG6-216ENST00000575176 SLC25A39Q9BZJ4 359 aaPredicted RBP6.31□□□□□ -1.4
SMG6-216ENST00000575176 NMES1Q9C002 83 aa6.31□□□□□ -1.4
SMG6-216ENST00000575176 PAIP2BQ9ULR5 123 aaKnown RBP6.31□□□□□ -1.4
SMG6-216ENST00000575176 HLA-DRB4X5D2U9 266 aa6.31□□□□□ -1.4
SMG6-216ENST00000575176 X6R8D5 127 aa6.31□□□□□ -1.4
SMG6-216ENST00000575176 HECTD4Q9Y4D8 3996 aa6.31□□□□□ -1.4
SMG6-216ENST00000575176 A0A087X0K7 114 aa6.3□□□□□ -1.4
SMG6-216ENST00000575176 C5orf51A6NDU8 294 aa6.3□□□□□ -1.4
SMG6-216ENST00000575176 ZNF705EA8MWA4 302 aaPredicted RBP6.3□□□□□ -1.4
SMG6-216ENST00000575176 FAM25EA8MYX2 175 aa6.3□□□□□ -1.4
SMG6-216ENST00000575176 H3BMM0 161 aa6.3□□□□□ -1.4
SMG6-216ENST00000575176 AGPAT2O15120 278 aa6.3□□□□□ -1.4
SMG6-216ENST00000575176 SPRY2O43597 315 aa6.3□□□□□ -1.4
SMG6-216ENST00000575176 CST7O76096 145 aa6.3□□□□□ -1.4
SMG6-216ENST00000575176 ATF4P18848 351 aaPredicted RBP6.3□□□□□ -1.4
SMG6-216ENST00000575176 CXCL3P19876 107 aa6.3□□□□□ -1.4
SMG6-216ENST00000575176 NUP62P37198 522 aaPredicted RBP6.3□□□□□ -1.4
SMG6-216ENST00000575176 PSMB3P49720 205 aa6.3□□□□□ -1.4
SMG6-216ENST00000575176 SULT1A1P50225 295 aa6.3□□□□□ -1.4
SMG6-216ENST00000575176 OPCMLQ14982 345 aa6.3□□□□□ -1.4
SMG6-216ENST00000575176 TEPPQ6URK8 271 aa6.3□□□□□ -1.4
SMG6-216ENST00000575176 AMTNQ6UX39 209 aa6.3□□□□□ -1.4
SMG6-216ENST00000575176 BPIFCQ8NFQ6 507 aa6.3□□□□□ -1.4
SMG6-216ENST00000575176 OR10P1Q8NGE3 313 aa6.3□□□□□ -1.4
SMG6-216ENST00000575176 CHAC2Q8WUX2 184 aa6.3□□□□□ -1.4
SMG6-216ENST00000575176 RNF126Q9BV68 326 aa6.3□□□□□ -1.4
SMG6-216ENST00000575176 CSTL1Q9H114 145 aa6.3□□□□□ -1.4
SMG6-216ENST00000575176 C11orf68Q9H3H3 251 aaKnown RBP6.3□□□□□ -1.4
SMG6-216ENST00000575176 NPVFQ9HCQ7 196 aa6.3□□□□□ -1.4
SMG6-216ENST00000575176 DOK5Q9P104 306 aa6.3□□□□□ -1.4
SMG6-216ENST00000575176 FAT2Q9NYQ8 4349 aa6.3□□□□□ -1.4
SMG6-216ENST00000575176 A0A0J9YWU9 116 aa6.29□□□□□ -1.4
SMG6-216ENST00000575176 F6UB75 175 aa6.29□□□□□ -1.4
SMG6-216ENST00000575176 G3V3Q6 166 aa6.29□□□□□ -1.4
SMG6-216ENST00000575176 DNASE2O00115 360 aaPredicted RBP6.29□□□□□ -1.4
SMG6-216ENST00000575176 PTTG1O95997 202 aa6.29□□□□□ -1.4
SMG6-216ENST00000575176 CFDP00746 253 aaPredicted RBP6.29□□□□□ -1.4
SMG6-216ENST00000575176 CA1P00915 261 aaPredicted RBP6.29□□□□□ -1.4
SMG6-216ENST00000575176 LYL1P12980 280 aa6.29□□□□□ -1.4
SMG6-216ENST00000575176 S100A10P60903 97 aa6.29□□□□□ -1.4
SMG6-216ENST00000575176 SELENOTP62341 195 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms