RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 PPIAL4GP0DN37 164 aa6.9□□□□□ -1.3
RPAIN-215ENST00000575112 ESDP10768 282 aa6.9□□□□□ -1.3
RPAIN-215ENST00000575112 VDAC2P45880 294 aaPredicted RBP6.9□□□□□ -1.3
RPAIN-215ENST00000575112 LOXL3P58215 753 aa6.9□□□□□ -1.3
RPAIN-215ENST00000575112 CORO2AQ92828 525 aa6.9□□□□□ -1.3
RPAIN-215ENST00000575112 hDV102S1A0JD36 115 aa6.9□□□□□ -1.31
RPAIN-215ENST00000575112 USF1P22415 310 aaPredicted RBP6.9□□□□□ -1.31
RPAIN-215ENST00000575112 RPL27AP46776 148 aaKnown RBP6.9□□□□□ -1.31
RPAIN-215ENST00000575112 ECSCRQ19T08 205 aa6.9□□□□□ -1.31
RPAIN-215ENST00000575112 TCF24Q7RTU0 167 aa6.9□□□□□ -1.31
RPAIN-215ENST00000575112 RNASE6Q93091 150 aaKnown RBP6.9□□□□□ -1.31
RPAIN-215ENST00000575112 KCNS1Q96KK3 526 aa6.9□□□□□ -1.31
RPAIN-215ENST00000575112 TMUB1Q9BVT8 246 aa6.9□□□□□ -1.31
RPAIN-215ENST00000575112 FCER1GP30273 86 aa6.89□□□□□ -1.31
RPAIN-215ENST00000575112 IBA57Q5T440 356 aaKnown RBP6.89□□□□□ -1.31
RPAIN-215ENST00000575112 MBNL2Q5VZF2 373 aaKnown RBP6.89□□□□□ -1.31
RPAIN-215ENST00000575112 RUSC1-AS1Q66K80 236 aa6.89□□□□□ -1.31
RPAIN-215ENST00000575112 ZNF841Q6ZN19 808 aa6.89□□□□□ -1.31
RPAIN-215ENST00000575112 Q6ZS92 163 aa6.89□□□□□ -1.31
RPAIN-215ENST00000575112 C18orf32Q8TCD1 76 aa6.89□□□□□ -1.31
RPAIN-215ENST00000575112 PGLYRP4Q96LB8 373 aa6.89□□□□□ -1.31
RPAIN-215ENST00000575112 RPUSD1Q9UJJ7 312 aaKnown RBP6.89□□□□□ -1.31
RPAIN-215ENST00000575112 AMMECR1Q9Y4X0 333 aaPredicted RBP6.89□□□□□ -1.31
RPAIN-215ENST00000575112 ZNF462Q96JM2 2506 aa6.89□□□□□ -1.31
RPAIN-215ENST00000575112 MBD3L4A6NDZ8 208 aaPredicted RBP6.89□□□□□ -1.31
RPAIN-215ENST00000575112 MBD3L3A6NE82 208 aaPredicted RBP6.89□□□□□ -1.31
RPAIN-215ENST00000575112 MBD3L5A6NJ08 208 aaPredicted RBP6.89□□□□□ -1.31
RPAIN-215ENST00000575112 UPK2O00526 184 aa6.89□□□□□ -1.31
RPAIN-215ENST00000575112 CT45A10P0DMU9 189 aa6.89□□□□□ -1.31
RPAIN-215ENST00000575112 Q0VG73 95 aa6.89□□□□□ -1.31
RPAIN-215ENST00000575112 MPV17L2Q567V2 206 aa6.89□□□□□ -1.31
RPAIN-215ENST00000575112 KHDC1LQ5JSQ8 128 aa6.89□□□□□ -1.31
RPAIN-215ENST00000575112 PDPNQ86YL7 162 aa6.89□□□□□ -1.31
RPAIN-215ENST00000575112 OR4F17Q8NGA8 305 aa6.89□□□□□ -1.31
RPAIN-215ENST00000575112 MBD3L2Q8NHZ7 208 aaPredicted RBP6.89□□□□□ -1.31
RPAIN-215ENST00000575112 LSM4Q9Y4Z0 139 aaKnown RBP6.89□□□□□ -1.31
RPAIN-215ENST00000575112 E7EQL1 145 aa6.89□□□□□ -1.31
RPAIN-215ENST00000575112 CX3CL1P78423 397 aa6.89□□□□□ -1.31
RPAIN-215ENST00000575112 TCF15Q12870 199 aa6.89□□□□□ -1.31
RPAIN-215ENST00000575112 OR4B1Q8NGF8 309 aa6.89□□□□□ -1.31
RPAIN-215ENST00000575112 TIMD4Q96H15 378 aa6.89□□□□□ -1.31
RPAIN-215ENST00000575112 URB1-AS1Q96HZ7 61 aa6.89□□□□□ -1.31
RPAIN-215ENST00000575112 LOC389332A0A1B0GUA5 103 aa6.88□□□□□ -1.31
RPAIN-215ENST00000575112 OR2T8A6NH00 312 aa6.88□□□□□ -1.31
RPAIN-215ENST00000575112 FCGR2BP31994 310 aaPredicted RBP6.88□□□□□ -1.31
RPAIN-215ENST00000575112 FXYD7P58549 80 aa6.88□□□□□ -1.31
RPAIN-215ENST00000575112 PIP4P1Q86T03 277 aa6.88□□□□□ -1.31
RPAIN-215ENST00000575112 C1orf162Q8NEQ5 155 aaPredicted RBP6.88□□□□□ -1.31
RPAIN-215ENST00000575112 RAB1CQ92928 201 aa6.88□□□□□ -1.31
RPAIN-215ENST00000575112 ALKBH7Q9BT30 221 aaPredicted RBP6.88□□□□□ -1.31
RPAIN-215ENST00000575112 UQCR10Q9UDW1 63 aa6.88□□□□□ -1.31
RPAIN-215ENST00000575112 C8orf88P0DMB2 117 aa6.88□□□□□ -1.31
RPAIN-215ENST00000575112 CA7P43166 264 aa6.88□□□□□ -1.31
RPAIN-215ENST00000575112 PRRX1P54821 245 aa6.88□□□□□ -1.31
RPAIN-215ENST00000575112 SCGB2A2Q13296 93 aa6.88□□□□□ -1.31
RPAIN-215ENST00000575112 GOLT1AQ6ZVE7 132 aa6.88□□□□□ -1.31
RPAIN-215ENST00000575112 EXOC3-AS1Q8N2X6 119 aa6.88□□□□□ -1.31
RPAIN-215ENST00000575112 OR4C13Q8NGP0 309 aa6.88□□□□□ -1.31
RPAIN-215ENST00000575112 WASHC3Q9Y3C0 194 aa6.88□□□□□ -1.31
RPAIN-215ENST00000575112 DSCAML1Q8TD84 2053 aa6.88□□□□□ -1.31
RPAIN-215ENST00000575112 CSMD2Q7Z408 3487 aa6.88□□□□□ -1.31
RPAIN-215ENST00000575112 OR2J3O76001 311 aa6.88□□□□□ -1.31
RPAIN-215ENST00000575112 ADTRPQ96IZ2 230 aa6.88□□□□□ -1.31
RPAIN-215ENST00000575112 NAA38Q9BRA0 125 aaKnown RBP6.88□□□□□ -1.31
RPAIN-215ENST00000575112 FOXA2Q9Y261 457 aaPredicted RBP6.88□□□□□ -1.31
RPAIN-215ENST00000575112 COX11Q9Y6N1 276 aa6.88□□□□□ -1.31
RPAIN-215ENST00000575112 CBY3A6NI87 242 aa6.87□□□□□ -1.31
RPAIN-215ENST00000575112 IGLV1-44P01699 117 aa6.87□□□□□ -1.31
RPAIN-215ENST00000575112 ZNF788Q6ZQV5 615 aa6.87□□□□□ -1.31
RPAIN-215ENST00000575112 WFDC3Q8IUB2 231 aa6.87□□□□□ -1.31
RPAIN-215ENST00000575112 PRSS33Q8NF86 280 aa6.87□□□□□ -1.31
RPAIN-215ENST00000575112 SVIPQ8NHG7 77 aa6.87□□□□□ -1.31
RPAIN-215ENST00000575112 GNB1LQ9BYB4 327 aa6.87□□□□□ -1.31
RPAIN-215ENST00000575112 MRPL36Q9P0J6 103 aaKnown RBP6.87□□□□□ -1.31
RPAIN-215ENST00000575112 AMY1AP04745 511 aa6.87□□□□□ -1.31
RPAIN-215ENST00000575112 PSG1P11464 419 aa6.87□□□□□ -1.31
RPAIN-215ENST00000575112 CTSZQ9UBR2 303 aa6.87□□□□□ -1.31
RPAIN-215ENST00000575112 J3QW42 95 aa6.87□□□□□ -1.31
RPAIN-215ENST00000575112 KIR2DS2P43631 304 aa6.87□□□□□ -1.31
RPAIN-215ENST00000575112 WT1-ASQ06250 92 aa6.87□□□□□ -1.31
RPAIN-215ENST00000575112 UBE2V1Q13404 147 aa6.87□□□□□ -1.31
RPAIN-215ENST00000575112 LDLRAD2Q5SZI1 272 aa6.87□□□□□ -1.31
RPAIN-215ENST00000575112 LINC00322Q6ZN03 302 aaPredicted RBP6.87□□□□□ -1.31
RPAIN-215ENST00000575112 OR8B2Q96RD0 313 aa6.87□□□□□ -1.31
RPAIN-215ENST00000575112 FASNP49327 2511 aaKnown RBP6.86□□□□□ -1.31
RPAIN-215ENST00000575112 TMEM178BH3BS89 294 aa6.86□□□□□ -1.31
RPAIN-215ENST00000575112 ISLRO14498 428 aa6.86□□□□□ -1.31
RPAIN-215ENST00000575112 APCSP02743 223 aa6.86□□□□□ -1.31
RPAIN-215ENST00000575112 COL8A1P27658 744 aa6.86□□□□□ -1.31
RPAIN-215ENST00000575112 PPOXP50336 477 aa6.86□□□□□ -1.31
RPAIN-215ENST00000575112 RASL11BQ9BPW5 248 aa6.86□□□□□ -1.31
RPAIN-215ENST00000575112 FAM181BA6NEQ2 426 aa6.86□□□□□ -1.31
RPAIN-215ENST00000575112 ZNF785A8K8V0 405 aa6.86□□□□□ -1.31
RPAIN-215ENST00000575112 M0R2Z0 102 aa6.86□□□□□ -1.31
RPAIN-215ENST00000575112 GNG7O60262 68 aa6.86□□□□□ -1.31
RPAIN-215ENST00000575112 TBR1Q16650 682 aa6.86□□□□□ -1.31
RPAIN-215ENST00000575112 FBLN7Q53RD9 439 aa6.86□□□□□ -1.31
RPAIN-215ENST00000575112 FNDC4Q9H6D8 234 aaPredicted RBP6.86□□□□□ -1.31
RPAIN-215ENST00000575112 TMEM167BQ9NRX6 74 aa6.86□□□□□ -1.31
RPAIN-215ENST00000575112 C2orf70A6NJV1 201 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms