RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 C11orf52Q96A22 123 aa8.31□□□□□ -1.08
USP43-205ENST00000574408 TRGV9Q99603 122 aa8.31□□□□□ -1.08
USP43-205ENST00000574408 MINOS1-NBL1R4GNA1 71 aa8.31□□□□□ -1.08
USP43-205ENST00000574408 ARL2-SNX15V9GYD0 113 aa8.31□□□□□ -1.08
USP43-205ENST00000574408 CRYBB3P26998 211 aa8.31□□□□□ -1.08
USP43-205ENST00000574408 AMTP48728 403 aa8.31□□□□□ -1.08
USP43-205ENST00000574408 PTTG1IPP53801 180 aa8.31□□□□□ -1.08
USP43-205ENST00000574408 NUTF2P61970 127 aaKnown RBP8.31□□□□□ -1.08
USP43-205ENST00000574408 SUMO1P63165 101 aaKnown RBP8.31□□□□□ -1.08
USP43-205ENST00000574408 LINC00305Q7Z4B0 112 aa8.31□□□□□ -1.08
USP43-205ENST00000574408 FAM19A2Q8N3H0 131 aa8.31□□□□□ -1.08
USP43-205ENST00000574408 OOSP1A8MZH6 123 aa8.31□□□□□ -1.08
USP43-205ENST00000574408 GGTLC3B5MD39 225 aa8.31□□□□□ -1.08
USP43-205ENST00000574408 NUPR1O60356 82 aa8.31□□□□□ -1.08
USP43-205ENST00000574408 PDLIM4P50479 330 aa8.31□□□□□ -1.08
USP43-205ENST00000574408 ERVFC1-1P60608 527 aa8.31□□□□□ -1.08
USP43-205ENST00000574408 OCC1Q8TAD7 63 aa8.31□□□□□ -1.08
USP43-205ENST00000574408 PAXXQ9BUH6 204 aa8.31□□□□□ -1.08
USP43-205ENST00000574408 ZNF462Q96JM2 2506 aa8.3□□□□□ -1.08
USP43-205ENST00000574408 SIGLECL1Q8N7X8 197 aa8.3□□□□□ -1.08
USP43-205ENST00000574408 CCL19Q99731 98 aa8.3□□□□□ -1.08
USP43-205ENST00000574408 SRSF8Q9BRL6 282 aaKnown RBP8.3□□□□□ -1.08
USP43-205ENST00000574408 NAT8BQ9UHF3 227 aa8.3□□□□□ -1.08
USP43-205ENST00000574408 CRISP2P16562 243 aa8.3□□□□□ -1.08
USP43-205ENST00000574408 MAJINQ3KP22 176 aa8.3□□□□□ -1.08
USP43-205ENST00000574408 Q6ZN92 141 aa8.3□□□□□ -1.08
USP43-205ENST00000574408 A0A1W2PRE2 83 aa8.29□□□□□ -1.08
USP43-205ENST00000574408 I3L2K1 104 aa8.29□□□□□ -1.08
USP43-205ENST00000574408 PRB1P04280 392 aa8.29□□□□□ -1.08
USP43-205ENST00000574408 TMEM11P17152 192 aa8.29□□□□□ -1.08
USP43-205ENST00000574408 KLF17Q5JT82 389 aaPredicted RBP8.29□□□□□ -1.08
USP43-205ENST00000574408 RPLP1P05386 114 aaKnown RBP8.29□□□□□ -1.08
USP43-205ENST00000574408 CX3CL1P78423 397 aa8.29□□□□□ -1.08
USP43-205ENST00000574408 PERPQ96FX8 193 aa8.29□□□□□ -1.08
USP43-205ENST00000574408 SFRP2Q96HF1 295 aa8.29□□□□□ -1.08
USP43-205ENST00000574408 SRD5A3Q9H8P0 318 aa8.29□□□□□ -1.08
USP43-205ENST00000574408 CBY1Q9Y3M2 126 aa8.29□□□□□ -1.08
USP43-205ENST00000574408 SNURFLB1AK76 121 aa8.29□□□□□ -1.08
USP43-205ENST00000574408 HYPMO75409 117 aa8.29□□□□□ -1.08
USP43-205ENST00000574408 IGLC1P0CG04 106 aa8.29□□□□□ -1.08
USP43-205ENST00000574408 UBE2E1P51965 193 aa8.29□□□□□ -1.08
USP43-205ENST00000574408 NDPQ00604 133 aa8.29□□□□□ -1.08
USP43-205ENST00000574408 VAMP3Q15836 100 aa8.29□□□□□ -1.08
USP43-205ENST00000574408 ARPC1AQ92747 370 aa8.29□□□□□ -1.08
USP43-205ENST00000574408 TMEM208Q9BTX3 173 aa8.29□□□□□ -1.08
USP43-205ENST00000574408 HELTA6NFD8 242 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 CD99P14209 185 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 SAA4P35542 130 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 CAMPP49913 170 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 LYZP61626 148 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 TIGITQ495A1 244 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 Q8N6K4 173 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 TBL2Q9Y4P3 447 aaKnown RBP8.28□□□□□ -1.08
USP43-205ENST00000574408 ABCA2Q9BZC7 2435 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 C9JCJ5 164 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 K7EIM0 57 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 GNG4P50150 75 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 CENPWQ5EE01 88 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 FAM168AQ92567 244 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 RASL11BQ9BPW5 248 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 VPS25Q9BRG1 176 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 PYGO2Q9BRQ0 406 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 S4R3C0 116 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 LRRK2Q5S007 2527 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 EPG5Q9HCE0 2579 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 K7EN84 100 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 PSG1P11464 419 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 SRP14P37108 136 aaKnown RBP8.28□□□□□ -1.08
USP43-205ENST00000574408 FAM120AOSQ5T036 256 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 ZNF562Q6V9R5 426 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 FXYD5Q96DB9 178 aa8.28□□□□□ -1.08
USP43-205ENST00000574408 NOL4LQ96MY1 436 aaPredicted RBP8.28□□□□□ -1.08
USP43-205ENST00000574408 EBI3Q14213 229 aa8.27□□□□□ -1.09
USP43-205ENST00000574408 LEMD1Q68G75 181 aa8.27□□□□□ -1.09
USP43-205ENST00000574408 OR10G8Q8NGN5 311 aa8.27□□□□□ -1.09
USP43-205ENST00000574408 PIMREGQ9BSJ6 248 aa8.27□□□□□ -1.09
USP43-205ENST00000574408 IGHV4-61A0A0C4DH41 118 aa8.27□□□□□ -1.09
USP43-205ENST00000574408 ZNF253O75346 499 aa8.27□□□□□ -1.09
USP43-205ENST00000574408 FRMD6-AS1P0C7T7 363 aa8.27□□□□□ -1.09
USP43-205ENST00000574408 FAM106CPP0CH98 169 aa8.27□□□□□ -1.09
USP43-205ENST00000574408 HNRNPA3P51991 378 aaKnown RBP8.27□□□□□ -1.09
USP43-205ENST00000574408 ATP5J2P56134 94 aa8.27□□□□□ -1.09
USP43-205ENST00000574408 OR8I2Q8N0Y5 310 aa8.27□□□□□ -1.09
USP43-205ENST00000574408 OR1L6Q8NGR2 347 aa8.27□□□□□ -1.09
USP43-205ENST00000574408 BLNKQ8WV28 456 aa8.27□□□□□ -1.09
USP43-205ENST00000574408 F2Z2F3 143 aa8.26□□□□□ -1.09
USP43-205ENST00000574408 GGCTO75223 188 aaKnown RBP8.26□□□□□ -1.09
USP43-205ENST00000574408 SERF1AO75920 110 aa8.26□□□□□ -1.09
USP43-205ENST00000574408 IGKV1-17P01599 117 aa8.26□□□□□ -1.09
USP43-205ENST00000574408 ANKRD39Q53RE8 183 aa8.26□□□□□ -1.09
USP43-205ENST00000574408 HIGD1AQ9Y241 93 aa8.26□□□□□ -1.09
USP43-205ENST00000574408 SVEP1Q4LDE5 3571 aa8.26□□□□□ -1.09
USP43-205ENST00000574408 IGHV3OR16-10A0A075B7F0 116 aa8.26□□□□□ -1.09
USP43-205ENST00000574408 C20orf202A1L168 122 aa8.26□□□□□ -1.09
USP43-205ENST00000574408 CA1P00915 261 aaPredicted RBP8.26□□□□□ -1.09
USP43-205ENST00000574408 BRS3P32247 399 aa8.26□□□□□ -1.09
USP43-205ENST00000574408 RANP62826 216 aaKnown RBP8.26□□□□□ -1.09
USP43-205ENST00000574408 Q56UQ5 140 aa8.26□□□□□ -1.09
USP43-205ENST00000574408 STXBP6Q8NFX7 210 aa8.26□□□□□ -1.09
USP43-205ENST00000574408 AJUBAQ96IF1 538 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms