RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 COQ2Q96H96 371 aa6.19□□□□□ -1.42
RPA1-207ENST00000574049 BBC3Q96PG8 261 aaPredicted RBP6.19□□□□□ -1.42
RPA1-207ENST00000574049 F11RQ9Y624 299 aaKnown RBP6.19□□□□□ -1.42
RPA1-207ENST00000574049 ISLRO14498 428 aa6.19□□□□□ -1.42
RPA1-207ENST00000574049 FOXH1O75593 365 aa6.19□□□□□ -1.42
RPA1-207ENST00000574049 APCSP02743 223 aa6.19□□□□□ -1.42
RPA1-207ENST00000574049 AMY1AP04745 511 aa6.19□□□□□ -1.42
RPA1-207ENST00000574049 PSG1P11464 419 aa6.19□□□□□ -1.42
RPA1-207ENST00000574049 CEACAM3P40198 252 aa6.19□□□□□ -1.42
RPA1-207ENST00000574049 LGALS7P47929 136 aa6.19□□□□□ -1.42
RPA1-207ENST00000574049 IBA57Q5T440 356 aaKnown RBP6.19□□□□□ -1.42
RPA1-207ENST00000574049 C18orf15Q96N68 181 aa6.19□□□□□ -1.42
RPA1-207ENST00000574049 DUX5Q96PT3 197 aa6.19□□□□□ -1.42
RPA1-207ENST00000574049 KBTBD11-OT1A0A1B0GTJ5 212 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 HYPMO75409 117 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 P01737 135 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 IGKV1-16P04430 117 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 IL6RP08887 468 aaPredicted RBP6.18□□□□□ -1.42
RPA1-207ENST00000574049 SAA1P0DJI8 122 aaPredicted RBP6.18□□□□□ -1.42
RPA1-207ENST00000574049 APOBEC3AP31941 199 aaPredicted RBP6.18□□□□□ -1.42
RPA1-207ENST00000574049 ZNF138P52744 262 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 LYPD2Q6UXB3 125 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 ZNF788Q6ZQV5 615 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 FA2HQ7L5A8 372 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 C5orf17Q8NAS9 161 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 SFRP2Q96HF1 295 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 TMEM191AQ9H0A3 160 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 FNDC4Q9H6D8 234 aaPredicted RBP6.18□□□□□ -1.42
RPA1-207ENST00000574049 AP5S1Q9NUS5 200 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 FBLN5Q9UBX5 448 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 JPT1Q9UK76 154 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 RBFOX2O43251 390 aaKnown RBP eCLIP6.18□□□□□ -1.42
RPA1-207ENST00000574049 NDUFS7O75251 213 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 IGHV3-11P01762 117 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 KLRD1Q13241 179 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 GOLT1AQ6ZVE7 132 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 BPIFA4PQ86YQ2 179 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 OCC1Q8TAD7 63 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 WFDC12Q8WWY7 111 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 IL4P05112 153 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 PPIFP30405 207 aaKnown RBP6.18□□□□□ -1.42
RPA1-207ENST00000574049 NMUP48645 174 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 UBE2V1Q13404 147 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 SPSB3Q6PJ21 355 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 STPG4Q8N801 248 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 C11orf44Q8N8P7 122 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 OR4C13Q8NGP0 309 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 TMEM167BQ9NRX6 74 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 TMEM56-RWDD3S4R434 201 aa6.18□□□□□ -1.42
RPA1-207ENST00000574049 HELZ2Q9BYK8 2649 aaKnown RBP6.18□□□□□ -1.42
RPA1-207ENST00000574049 IGKV1D-33P01593 117 aa6.17□□□□□ -1.42
RPA1-207ENST00000574049 IGKV1-33P01594 117 aa6.17□□□□□ -1.42
RPA1-207ENST00000574049 PRSS1P07477 247 aa6.17□□□□□ -1.42
RPA1-207ENST00000574049 DUTP33316 252 aaKnown RBP6.17□□□□□ -1.42
RPA1-207ENST00000574049 LRRC75BQ2VPJ9 315 aa6.17□□□□□ -1.42
RPA1-207ENST00000574049 TCF24Q7RTU0 167 aa6.17□□□□□ -1.42
RPA1-207ENST00000574049 LINC00305Q7Z4B0 112 aa6.17□□□□□ -1.42
RPA1-207ENST00000574049 OR4D5Q8NGN0 318 aa6.17□□□□□ -1.42
RPA1-207ENST00000574049 SMIM12Q96EX1 92 aa6.17□□□□□ -1.42
RPA1-207ENST00000574049 NDFIP1Q9BT67 221 aa6.17□□□□□ -1.42
RPA1-207ENST00000574049 FOXA2Q9Y261 457 aaPredicted RBP6.17□□□□□ -1.42
RPA1-207ENST00000574049 AMMECR1Q9Y4X0 333 aaPredicted RBP6.17□□□□□ -1.42
RPA1-207ENST00000574049 IGKV1D-17A0A075B6S4 117 aa6.17□□□□□ -1.42
RPA1-207ENST00000574049 PDE6DO43924 150 aa6.17□□□□□ -1.42
RPA1-207ENST00000574049 KIR2DS2P43631 304 aa6.17□□□□□ -1.42
RPA1-207ENST00000574049 ATP5J2P56134 94 aa6.17□□□□□ -1.42
RPA1-207ENST00000574049 SRSF4Q08170 494 aaKnown RBP6.17□□□□□ -1.42
RPA1-207ENST00000574049 FAM90A2PQ658T7 463 aa6.17□□□□□ -1.42
RPA1-207ENST00000574049 SLC25A34Q6PIV7 304 aa6.17□□□□□ -1.42
RPA1-207ENST00000574049 MAPK1IP1LQ8NDC0 245 aa6.17□□□□□ -1.42
RPA1-207ENST00000574049 LSM10Q969L4 123 aaKnown RBP6.17□□□□□ -1.42
RPA1-207ENST00000574049 TRAV8-1A0A0A6YYK1 113 aa6.17□□□□□ -1.42
RPA1-207ENST00000574049 C19orf84I3L1E1 186 aa6.17□□□□□ -1.42
RPA1-207ENST00000574049 GCHFRP30047 84 aa6.17□□□□□ -1.42
RPA1-207ENST00000574049 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.17□□□□□ -1.42
RPA1-207ENST00000574049 THYN1Q9P016 225 aa6.17□□□□□ -1.42
RPA1-207ENST00000574049 MMP23AO75900 390 aa6.16□□□□□ -1.42
RPA1-207ENST00000574049 KRTAP27-1Q3LI81 207 aa6.16□□□□□ -1.42
RPA1-207ENST00000574049 MPV17L2Q567V2 206 aa6.16□□□□□ -1.42
RPA1-207ENST00000574049 LOC105371242A0A075B767 164 aa6.16□□□□□ -1.42
RPA1-207ENST00000574049 TMEM250H0YL14 139 aa6.16□□□□□ -1.42
RPA1-207ENST00000574049 HAX1O00165 279 aa6.16□□□□□ -1.42
RPA1-207ENST00000574049 IGFL4Q6B9Z1 124 aa6.16□□□□□ -1.42
RPA1-207ENST00000574049 LYPD6Q86Y78 171 aa6.16□□□□□ -1.42
RPA1-207ENST00000574049 NRGNQ92686 78 aa6.16□□□□□ -1.42
RPA1-207ENST00000574049 DPF1Q92782 380 aa6.16□□□□□ -1.42
RPA1-207ENST00000574049 GTSF1LQ9H1H1 148 aa6.16□□□□□ -1.42
RPA1-207ENST00000574049 DSCAMO60469 2012 aa6.16□□□□□ -1.42
RPA1-207ENST00000574049 ITPR1Q14643 2758 aa6.16□□□□□ -1.42
RPA1-207ENST00000574049 C8orf88P0DMB2 117 aa6.16□□□□□ -1.42
RPA1-207ENST00000574049 NMSQ5H8A3 153 aa6.16□□□□□ -1.42
RPA1-207ENST00000574049 SAMD13Q5VXD3 122 aa6.16□□□□□ -1.42
RPA1-207ENST00000574049 Q6P435 159 aa6.16□□□□□ -1.42
RPA1-207ENST00000574049 CRIP3Q6Q6R5 217 aa6.16□□□□□ -1.42
RPA1-207ENST00000574049 C12orf54Q6X4T0 127 aa6.16□□□□□ -1.42
RPA1-207ENST00000574049 OR4A5Q8NH83 315 aa6.16□□□□□ -1.42
RPA1-207ENST00000574049 SRSF12Q8WXF0 261 aaKnown RBP6.16□□□□□ -1.42
RPA1-207ENST00000574049 SLC25A33Q9BSK2 321 aa6.16□□□□□ -1.42
RPA1-207ENST00000574049 H3BUT2 72 aa6.15□□□□□ -1.42
RPA1-207ENST00000574049 CCL25O15444 150 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms