RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 NUP62P37198 522 aaPredicted RBP20.39■□□□□ 0.85
SCARF1-207ENST00000573867 BPIFCQ8NFQ6 507 aa20.39■□□□□ 0.85
SCARF1-207ENST00000573867 FAM24AA6NFZ4 105 aa20.38■□□□□ 0.85
SCARF1-207ENST00000573867 KNCNA6PVL3 124 aa20.38■□□□□ 0.85
SCARF1-207ENST00000573867 PRAF2O60831 178 aa20.38■□□□□ 0.85
SCARF1-207ENST00000573867 CFDP00746 253 aaPredicted RBP20.38■□□□□ 0.85
SCARF1-207ENST00000573867 ORM2P19652 201 aa20.38■□□□□ 0.85
SCARF1-207ENST00000573867 DEFA1P59665 94 aa20.38■□□□□ 0.85
SCARF1-207ENST00000573867 DEFA3P59666 94 aa20.38■□□□□ 0.85
SCARF1-207ENST00000573867 S100A10P60903 97 aa20.38■□□□□ 0.85
SCARF1-207ENST00000573867 CSTL1Q9H114 145 aa20.38■□□□□ 0.85
SCARF1-207ENST00000573867 NPVFQ9HCQ7 196 aa20.38■□□□□ 0.85
SCARF1-207ENST00000573867 GOSR2O14653 212 aa20.37■□□□□ 0.85
SCARF1-207ENST00000573867 SPRY2O43597 315 aa20.37■□□□□ 0.85
SCARF1-207ENST00000573867 C1orf194Q5T5A4 169 aa20.37■□□□□ 0.85
SCARF1-207ENST00000573867 RNF183Q96D59 192 aa20.37■□□□□ 0.85
SCARF1-207ENST00000573867 MGAT4CQ9UBM8 478 aa20.37■□□□□ 0.85
SCARF1-207ENST00000573867 TP53TG1Q9Y2A0 90 aa20.37■□□□□ 0.85
SCARF1-207ENST00000573867 CST7O76096 145 aa20.36■□□□□ 0.85
SCARF1-207ENST00000573867 BCAP31P51572 246 aa20.36■□□□□ 0.85
SCARF1-207ENST00000573867 CAV2P51636 162 aa20.36■□□□□ 0.85
SCARF1-207ENST00000573867 SLC38A11Q08AI6 406 aa20.36■□□□□ 0.85
SCARF1-207ENST00000573867 PSMG4Q5JS54 123 aa20.36■□□□□ 0.85
SCARF1-207ENST00000573867 CASC10Q5T4H9 136 aa20.36■□□□□ 0.85
SCARF1-207ENST00000573867 PPP1R14BQ96C90 147 aa20.36■□□□□ 0.85
SCARF1-207ENST00000573867 C17orf77Q96MU5 243 aa20.36■□□□□ 0.85
SCARF1-207ENST00000573867 DOK5Q9P104 306 aa20.36■□□□□ 0.85
SCARF1-207ENST00000573867 PFDN2Q9UHV9 154 aa20.36■□□□□ 0.85
SCARF1-207ENST00000573867 SLC45A2Q9UMX9 530 aa20.36■□□□□ 0.85
SCARF1-207ENST00000573867 DEDDO75618 318 aa20.35■□□□□ 0.85
SCARF1-207ENST00000573867 TRPT1Q86TN4 253 aaKnown RBP20.35■□□□□ 0.85
SCARF1-207ENST00000573867 OR1B1Q8NGR6 318 aa20.35■□□□□ 0.85
SCARF1-207ENST00000573867 SLC25A32Q9H2D1 315 aa20.35■□□□□ 0.85
SCARF1-207ENST00000573867 IGSF23A1L1A6 192 aa20.34■□□□□ 0.85
SCARF1-207ENST00000573867 ZNF98A6NK75 572 aa20.34■□□□□ 0.85
SCARF1-207ENST00000573867 SOCS3O14543 225 aa20.34■□□□□ 0.85
SCARF1-207ENST00000573867 LYL1P12980 280 aa20.34■□□□□ 0.85
SCARF1-207ENST00000573867 ZFAND6Q6FIF0 208 aa20.34■□□□□ 0.85
SCARF1-207ENST00000573867 STHQ8IWL8 128 aa20.34■□□□□ 0.85
SCARF1-207ENST00000573867 GGACTQ9BVM4 153 aa20.34■□□□□ 0.85
SCARF1-207ENST00000573867 DYNC2H1Q8NCM8 4307 aaKnown RBP20.34■□□□□ 0.85
SCARF1-207ENST00000573867 LINC00869P0C866 280 aa20.33■□□□□ 0.85
SCARF1-207ENST00000573867 TEPPQ6URK8 271 aa20.33■□□□□ 0.85
SCARF1-207ENST00000573867 OR8I2Q8N0Y5 310 aa20.33■□□□□ 0.85
SCARF1-207ENST00000573867 SCRT1Q9BWW7 348 aa20.33■□□□□ 0.85
SCARF1-207ENST00000573867 SLC25A22Q9H936 323 aa20.33■□□□□ 0.85
SCARF1-207ENST00000573867 LYRM2Q9NU23 88 aaPredicted RBP20.33■□□□□ 0.85
SCARF1-207ENST00000573867 FBXL17Q9UF56 701 aa20.33■□□□□ 0.85
SCARF1-207ENST00000573867 AGRNO00468 2067 aa20.32■□□□□ 0.84
SCARF1-207ENST00000573867 GIG44P09565 113 aaPredicted RBP20.32■□□□□ 0.84
SCARF1-207ENST00000573867 PLP1P60201 277 aa20.32■□□□□ 0.84
SCARF1-207ENST00000573867 ACTL10Q5JWF8 245 aa20.32■□□□□ 0.84
SCARF1-207ENST00000573867 TMEM252Q8N6L7 170 aa20.32■□□□□ 0.84
SCARF1-207ENST00000573867 TMEM217Q8N7C4 229 aa20.32■□□□□ 0.84
SCARF1-207ENST00000573867 MGST2Q99735 147 aa20.32■□□□□ 0.84
SCARF1-207ENST00000573867 TMEM147Q9BVK8 224 aa20.32■□□□□ 0.84
SCARF1-207ENST00000573867 SEPSECSQ9HD40 501 aaKnown RBP20.32■□□□□ 0.84
SCARF1-207ENST00000573867 H3BRN7 92 aa20.31■□□□□ 0.84
SCARF1-207ENST00000573867 CA1P00915 261 aaPredicted RBP20.31■□□□□ 0.84
SCARF1-207ENST00000573867 PVALBP20472 110 aaPredicted RBP20.31■□□□□ 0.84
SCARF1-207ENST00000573867 DEFB1P60022 68 aa20.31■□□□□ 0.84
SCARF1-207ENST00000573867 SELENOTP62341 195 aa20.31■□□□□ 0.84
SCARF1-207ENST00000573867 PATE2Q6UY27 113 aa20.31■□□□□ 0.84
SCARF1-207ENST00000573867 SLC25A39Q9BZJ4 359 aaPredicted RBP20.31■□□□□ 0.84
SCARF1-207ENST00000573867 AGPAT2O15120 278 aa20.3■□□□□ 0.84
SCARF1-207ENST00000573867 H2BFSP57053 126 aa20.3■□□□□ 0.84
SCARF1-207ENST00000573867 SNRPD3P62318 126 aaKnown RBP20.3■□□□□ 0.84
SCARF1-207ENST00000573867 EWSR1Q01844 656 aaKnown RBP eCLIP20.3■□□□□ 0.84
SCARF1-207ENST00000573867 RYR3Q15413 4870 aa20.3■□□□□ 0.84
SCARF1-207ENST00000573867 H0YIZ8 118 aa20.29■□□□□ 0.84
SCARF1-207ENST00000573867 C4BPBP20851 252 aa20.29■□□□□ 0.84
SCARF1-207ENST00000573867 UHRF2Q96PU4 802 aa20.29■□□□□ 0.84
SCARF1-207ENST00000573867 SHANK2-AS3Q9BTD1 123 aa20.29■□□□□ 0.84
SCARF1-207ENST00000573867 NMES1Q9C002 83 aa20.29■□□□□ 0.84
SCARF1-207ENST00000573867 OR5AC2Q9NZP5 309 aa20.29■□□□□ 0.84
SCARF1-207ENST00000573867 HIGD1AQ9Y241 93 aa20.29■□□□□ 0.84
SCARF1-207ENST00000573867 A0A0J9YWU9 116 aa20.28■□□□□ 0.84
SCARF1-207ENST00000573867 HYPMO75409 117 aa20.28■□□□□ 0.84
SCARF1-207ENST00000573867 SULT1A1P50225 295 aa20.28■□□□□ 0.84
SCARF1-207ENST00000573867 VWC2Q2TAL6 325 aa20.28■□□□□ 0.84
SCARF1-207ENST00000573867 ARL6Q9H0F7 186 aa20.28■□□□□ 0.84
SCARF1-207ENST00000573867 SACSQ9NZJ4 4579 aa20.27■□□□□ 0.84
SCARF1-207ENST00000573867 OR5G3P0C626 314 aa20.27■□□□□ 0.84
SCARF1-207ENST00000573867 LRRC37A5PQ49AS3 106 aa20.27■□□□□ 0.84
SCARF1-207ENST00000573867 GDF5OSQ5U4N7 250 aa20.27■□□□□ 0.84
SCARF1-207ENST00000573867 ZNF546Q86UE3 836 aa20.27■□□□□ 0.84
SCARF1-207ENST00000573867 GALR1P47211 349 aa20.26■□□□□ 0.83
SCARF1-207ENST00000573867 PSMB3P49720 205 aa20.26■□□□□ 0.83
SCARF1-207ENST00000573867 RAP2BP61225 183 aa20.26■□□□□ 0.83
SCARF1-207ENST00000573867 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa20.26■□□□□ 0.83
SCARF1-207ENST00000573867 RSG1Q9BU20 258 aa20.26■□□□□ 0.83
SCARF1-207ENST00000573867 UQCC1Q9NVA1 299 aa20.26■□□□□ 0.83
SCARF1-207ENST00000573867 WDR83OSQ9Y284 106 aa20.26■□□□□ 0.83
SCARF1-207ENST00000573867 H3BMM0 161 aa20.25■□□□□ 0.83
SCARF1-207ENST00000573867 SSNA1O43805 119 aa20.25■□□□□ 0.83
SCARF1-207ENST00000573867 GATAD1Q8WUU5 269 aa20.25■□□□□ 0.83
SCARF1-207ENST00000573867 C20orf173Q96LM9 149 aa20.25■□□□□ 0.83
SCARF1-207ENST00000573867 LINC00052Q96N35 136 aa20.25■□□□□ 0.83
SCARF1-207ENST00000573867 STX12Q86Y82 276 aa20.24■□□□□ 0.83
SCARF1-207ENST00000573867 ARV1Q9H2C2 271 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms