RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 DLX6P56179 175 aa12.5□□□□□ -0.41
NUP88-207ENST00000573584 PVRIGQ6DKI7 326 aa12.5□□□□□ -0.41
NUP88-207ENST00000573584 TEX45Q8NA69 505 aa12.5□□□□□ -0.41
NUP88-207ENST00000573584 GSX1Q9H4S2 264 aaPredicted RBP12.5□□□□□ -0.41
NUP88-207ENST00000573584 ZNF492Q9P255 531 aa12.5□□□□□ -0.41
NUP88-207ENST00000573584 DCHS1Q96JQ0 3298 aa12.5□□□□□ -0.41
NUP88-207ENST00000573584 KALRNO60229 2985 aa12.5□□□□□ -0.41
NUP88-207ENST00000573584 TMEM155Q4W5P6 130 aa12.5□□□□□ -0.41
NUP88-207ENST00000573584 RBPMS2Q6ZRY4 209 aaKnown RBP12.5□□□□□ -0.41
NUP88-207ENST00000573584 ASCL5Q7RTU5 278 aa12.5□□□□□ -0.41
NUP88-207ENST00000573584 ADGRG4Q8IZF6 3080 aa12.49□□□□□ -0.41
NUP88-207ENST00000573584 CNTFRP26992 372 aa12.49□□□□□ -0.41
NUP88-207ENST00000573584 RELQ04864 619 aaPredicted RBP12.49□□□□□ -0.41
NUP88-207ENST00000573584 FAM120AOSQ5T036 256 aa12.49□□□□□ -0.41
NUP88-207ENST00000573584 UNQ5815/PRO19632Q6UWF5 114 aa12.49□□□□□ -0.41
NUP88-207ENST00000573584 Q6ZVH6 145 aa12.49□□□□□ -0.41
NUP88-207ENST00000573584 OR4F17Q8NGA8 305 aa12.49□□□□□ -0.41
NUP88-207ENST00000573584 GFRA4Q9GZZ7 299 aa12.49□□□□□ -0.41
NUP88-207ENST00000573584 IGHV1-24A0A0C4DH33 117 aa12.48□□□□□ -0.41
NUP88-207ENST00000573584 A0A0G2JNJ9 132 aa12.48□□□□□ -0.41
NUP88-207ENST00000573584 OR4C46A6NHA9 309 aa12.48□□□□□ -0.41
NUP88-207ENST00000573584 PTTG1IPP53801 180 aa12.48□□□□□ -0.41
NUP88-207ENST00000573584 CHCHD1Q96BP2 118 aaKnown RBP12.48□□□□□ -0.41
NUP88-207ENST00000573584 Q9UFV3 132 aa12.48□□□□□ -0.41
NUP88-207ENST00000573584 CBY1Q9Y3M2 126 aa12.48□□□□□ -0.41
NUP88-207ENST00000573584 TRAV8-1A0A0A6YYK1 113 aa12.48□□□□□ -0.41
NUP88-207ENST00000573584 PLP1P60201 277 aa12.48□□□□□ -0.41
NUP88-207ENST00000573584 TMEM133Q9H2Q1 129 aa12.48□□□□□ -0.41
NUP88-207ENST00000573584 HIGD1AQ9Y241 93 aa12.48□□□□□ -0.41
NUP88-207ENST00000573584 DMXL2Q8TDJ6 3036 aa12.48□□□□□ -0.41
NUP88-207ENST00000573584 CHEK1O14757 476 aa12.48□□□□□ -0.41
NUP88-207ENST00000573584 CRXO43186 299 aaPredicted RBP12.48□□□□□ -0.41
NUP88-207ENST00000573584 LEPROTL1O95214 131 aa12.48□□□□□ -0.41
NUP88-207ENST00000573584 THBDP07204 575 aa12.48□□□□□ -0.41
NUP88-207ENST00000573584 COL8A1P27658 744 aa12.48□□□□□ -0.41
NUP88-207ENST00000573584 IGF2-ASQ6U949 168 aa12.48□□□□□ -0.41
NUP88-207ENST00000573584 LINC00173Q6ZV60 143 aa12.48□□□□□ -0.41
NUP88-207ENST00000573584 SYS1-DBNDD2H3BUS1 97 aa12.47□□□□□ -0.41
NUP88-207ENST00000573584 CCL25O15444 150 aa12.47□□□□□ -0.41
NUP88-207ENST00000573584 DLX1P56177 255 aa12.47□□□□□ -0.41
NUP88-207ENST00000573584 LYZP61626 148 aa12.47□□□□□ -0.41
NUP88-207ENST00000573584 CIARTQ8N365 385 aaPredicted RBP12.47□□□□□ -0.41
NUP88-207ENST00000573584 MUC15Q8N387 334 aa12.47□□□□□ -0.41
NUP88-207ENST00000573584 SIGLEC9Q9Y336 463 aa12.47□□□□□ -0.41
NUP88-207ENST00000573584 COX11Q9Y6N1 276 aa12.47□□□□□ -0.41
NUP88-207ENST00000573584 OTOGLQ3ZCN5 2332 aa12.47□□□□□ -0.41
NUP88-207ENST00000573584 PSG1P11464 419 aa12.47□□□□□ -0.41
NUP88-207ENST00000573584 PKDREJQ9NTG1 2253 aa12.46□□□□□ -0.41
NUP88-207ENST00000573584 LOC102724200A0A096LPH7 203 aaPredicted RBP12.46□□□□□ -0.41
NUP88-207ENST00000573584 TOX4O94842 621 aa12.46□□□□□ -0.41
NUP88-207ENST00000573584 PRB3Q04118 309 aaPredicted RBP12.46□□□□□ -0.41
NUP88-207ENST00000573584 Q86TA4 180 aa12.46□□□□□ -0.41
NUP88-207ENST00000573584 ZNF738Q8NE65 137 aa12.46□□□□□ -0.41
NUP88-207ENST00000573584 RNASE6Q93091 150 aaKnown RBP12.46□□□□□ -0.41
NUP88-207ENST00000573584 OTORQ9NRC9 128 aa12.46□□□□□ -0.41
NUP88-207ENST00000573584 KAAG1Q9UBP8 84 aa12.46□□□□□ -0.41
NUP88-207ENST00000573584 F11RQ9Y624 299 aaKnown RBP12.46□□□□□ -0.41
NUP88-207ENST00000573584 IGHV1-69-2A0A0G2JMI3 117 aa12.46□□□□□ -0.42
NUP88-207ENST00000573584 FAM231BA6NCW3 169 aa12.46□□□□□ -0.42
NUP88-207ENST00000573584 CRYGBP07316 175 aa12.46□□□□□ -0.42
NUP88-207ENST00000573584 PRNTQ86SH4 94 aa12.46□□□□□ -0.42
NUP88-207ENST00000573584 EXOC3-AS1Q8N2X6 119 aa12.46□□□□□ -0.42
NUP88-207ENST00000573584 NDFIP1Q9BT67 221 aa12.46□□□□□ -0.42
NUP88-207ENST00000573584 INSIG2Q9Y5U4 225 aa12.46□□□□□ -0.42
NUP88-207ENST00000573584 ABCA1O95477 2261 aa12.46□□□□□ -0.42
NUP88-207ENST00000573584 VSTM5A8MXK1 200 aa12.45□□□□□ -0.42
NUP88-207ENST00000573584 NPIPB6E9PJ23 425 aa12.45□□□□□ -0.42
NUP88-207ENST00000573584 GOLT1AQ6ZVE7 132 aa12.45□□□□□ -0.42
NUP88-207ENST00000573584 PRSS33Q8NF86 280 aa12.45□□□□□ -0.42
NUP88-207ENST00000573584 DYNLRB1Q9NP97 96 aa12.45□□□□□ -0.42
NUP88-207ENST00000573584 PPP1R27Q86WC6 154 aa12.45□□□□□ -0.42
NUP88-207ENST00000573584 SLC25A39Q9BZJ4 359 aaPredicted RBP12.45□□□□□ -0.42
NUP88-207ENST00000573584 ST20Q9HBF5 79 aa12.45□□□□□ -0.42
NUP88-207ENST00000573584 C1RLQ9NZP8 487 aa12.45□□□□□ -0.42
NUP88-207ENST00000573584 TP73-AS1Q9UF72 201 aa12.45□□□□□ -0.42
NUP88-207ENST00000573584 PRRG2O14669 202 aa12.44□□□□□ -0.42
NUP88-207ENST00000573584 ZNF138P52744 262 aa12.44□□□□□ -0.42
NUP88-207ENST00000573584 SH3BGRL2Q9UJC5 107 aa12.44□□□□□ -0.42
NUP88-207ENST00000573584 hDV102S1A0JD36 115 aa12.44□□□□□ -0.42
NUP88-207ENST00000573584 IGLC1P0CG04 106 aa12.44□□□□□ -0.42
NUP88-207ENST00000573584 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.44□□□□□ -0.42
NUP88-207ENST00000573584 TEX22C9J3V5 150 aa12.44□□□□□ -0.42
NUP88-207ENST00000573584 HAX1O00165 279 aa12.44□□□□□ -0.42
NUP88-207ENST00000573584 IGLV2-11P01706 119 aa12.44□□□□□ -0.42
NUP88-207ENST00000573584 RBP4P02753 201 aa12.44□□□□□ -0.42
NUP88-207ENST00000573584 UBE2V1Q13404 147 aa12.44□□□□□ -0.42
NUP88-207ENST00000573584 IGHV1-3A0A0C4DH29 117 aa12.43□□□□□ -0.42
NUP88-207ENST00000573584 LIPFP07098 398 aa12.43□□□□□ -0.42
NUP88-207ENST00000573584 Q71RC1 249 aaPredicted RBP12.43□□□□□ -0.42
NUP88-207ENST00000573584 RASL11BQ9BPW5 248 aa12.43□□□□□ -0.42
NUP88-207ENST00000573584 TMEM14CQ9P0S9 112 aa12.43□□□□□ -0.42
NUP88-207ENST00000573584 PAX2Q02962 417 aa12.43□□□□□ -0.42
NUP88-207ENST00000573584 TNFRSF14Q92956 283 aa12.43□□□□□ -0.42
NUP88-207ENST00000573584 TMEM191AQ9H0A3 160 aa12.43□□□□□ -0.42
NUP88-207ENST00000573584 FBXL15Q9H469 300 aa12.43□□□□□ -0.42
NUP88-207ENST00000573584 IGLV1-47P01700 117 aa12.42□□□□□ -0.42
NUP88-207ENST00000573584 APOHP02749 345 aaPredicted RBP12.42□□□□□ -0.42
NUP88-207ENST00000573584 OR5AL1P0C617 328 aa12.42□□□□□ -0.42
NUP88-207ENST00000573584 MAP1LC3CQ9BXW4 147 aa12.42□□□□□ -0.42
NUP88-207ENST00000573584 ZZEF1O43149 2961 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms