RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 RARRES2Q99969 163 aa12.59□□□□□ -0.39
SMG6-212ENST00000573153 SOCS3O14543 225 aa12.58□□□□□ -0.4
SMG6-212ENST00000573153 SSSCA1O60232 199 aa12.58□□□□□ -0.4
SMG6-212ENST00000573153 TSC22D2O75157 780 aa12.58□□□□□ -0.4
SMG6-212ENST00000573153 OR2F1Q13607 317 aa12.58□□□□□ -0.4
SMG6-212ENST00000573153 PSMG4Q5JS54 123 aa12.58□□□□□ -0.4
SMG6-212ENST00000573153 CEMP1Q6PRD7 247 aaPredicted RBP12.58□□□□□ -0.4
SMG6-212ENST00000573153 NUDT15Q9NV35 164 aa12.58□□□□□ -0.4
SMG6-212ENST00000573153 RCL1Q9Y2P8 373 aaKnown RBP12.58□□□□□ -0.4
SMG6-212ENST00000573153 JTBO76095 146 aa12.57□□□□□ -0.4
SMG6-212ENST00000573153 DLK1P80370 383 aa12.57□□□□□ -0.4
SMG6-212ENST00000573153 ASAH1Q13510 395 aa12.57□□□□□ -0.4
SMG6-212ENST00000573153 BPIFCQ8NFQ6 507 aa12.57□□□□□ -0.4
SMG6-212ENST00000573153 OR11H2Q8NH07 326 aa12.57□□□□□ -0.4
SMG6-212ENST00000573153 ZNF431Q8TF32 576 aaPredicted RBP12.57□□□□□ -0.4
SMG6-212ENST00000573153 TBC1D24Q9ULP9 559 aa12.57□□□□□ -0.4
SMG6-212ENST00000573153 X6R8D5 127 aa12.57□□□□□ -0.4
SMG6-212ENST00000573153 CXorf65A6NEN9 183 aa12.56□□□□□ -0.4
SMG6-212ENST00000573153 NUPR2A6NF83 97 aa12.56□□□□□ -0.4
SMG6-212ENST00000573153 ZNF705EA8MWA4 302 aaPredicted RBP12.56□□□□□ -0.4
SMG6-212ENST00000573153 K7EPK0 472 aa12.56□□□□□ -0.4
SMG6-212ENST00000573153 MBPP02686 304 aaPredicted RBP12.56□□□□□ -0.4
SMG6-212ENST00000573153 AKR1C1Q04828 323 aa12.56□□□□□ -0.4
SMG6-212ENST00000573153 ACTL10Q5JWF8 245 aa12.56□□□□□ -0.4
SMG6-212ENST00000573153 SAMD13Q5VXD3 122 aa12.56□□□□□ -0.4
SMG6-212ENST00000573153 GSG1LQ6UXU4 331 aa12.56□□□□□ -0.4
SMG6-212ENST00000573153 TMEM182Q6ZP80 229 aaPredicted RBP12.56□□□□□ -0.4
SMG6-212ENST00000573153 FRAS1Q86XX4 4008 aa12.56□□□□□ -0.4
SMG6-212ENST00000573153 TRAV6A0A075B6T7 132 aa12.55□□□□□ -0.4
SMG6-212ENST00000573153 H3BMM0 161 aa12.55□□□□□ -0.4
SMG6-212ENST00000573153 RBMY1A1P0DJD3 496 aaKnown RBP12.55□□□□□ -0.4
SMG6-212ENST00000573153 RBMY1CP0DJD4 496 aa12.55□□□□□ -0.4
SMG6-212ENST00000573153 HLA-DRB4P13762 266 aa12.55□□□□□ -0.4
SMG6-212ENST00000573153 S100A7P31151 101 aa12.55□□□□□ -0.4
SMG6-212ENST00000573153 PSMB3P49720 205 aa12.55□□□□□ -0.4
SMG6-212ENST00000573153 DEFB1P60022 68 aa12.55□□□□□ -0.4
SMG6-212ENST00000573153 PLP1P60201 277 aa12.55□□□□□ -0.4
SMG6-212ENST00000573153 RBMY1FQ15415 496 aaKnown RBP12.55□□□□□ -0.4
SMG6-212ENST00000573153 CLUHP3Q96NS8 147 aa12.55□□□□□ -0.4
SMG6-212ENST00000573153 WDR12Q9GZL7 423 aaKnown RBP12.55□□□□□ -0.4
SMG6-212ENST00000573153 HLA-DRB4X5D2U9 266 aa12.55□□□□□ -0.4
SMG6-212ENST00000573153 C7orf66A4D0T2 115 aa12.54□□□□□ -0.4
SMG6-212ENST00000573153 ZNF98A6NK75 572 aa12.54□□□□□ -0.4
SMG6-212ENST00000573153 DEFB4AO15263 64 aa12.54□□□□□ -0.4
SMG6-212ENST00000573153 H2AFB2P0C5Z0 115 aa12.54□□□□□ -0.4
SMG6-212ENST00000573153 ID1P41134 155 aa12.54□□□□□ -0.4
SMG6-212ENST00000573153 NANOS2P60321 138 aaKnown RBP12.54□□□□□ -0.4
SMG6-212ENST00000573153 SELENOTP62341 195 aa12.54□□□□□ -0.4
SMG6-212ENST00000573153 MZT2BQ6NZ67 158 aa12.54□□□□□ -0.4
SMG6-212ENST00000573153 CYP2G1PQ6ZSU1 146 aa12.54□□□□□ -0.4
SMG6-212ENST00000573153 OR8I2Q8N0Y5 310 aa12.54□□□□□ -0.4
SMG6-212ENST00000573153 PHLDA1Q8WV24 401 aaPredicted RBP12.54□□□□□ -0.4
SMG6-212ENST00000573153 GPR82Q96P67 336 aa12.54□□□□□ -0.4
SMG6-212ENST00000573153 SEC22CQ9BRL7 303 aa12.54□□□□□ -0.4
SMG6-212ENST00000573153 GGACTQ9BVM4 153 aa12.54□□□□□ -0.4
SMG6-212ENST00000573153 NPVFQ9HCQ7 196 aa12.54□□□□□ -0.4
SMG6-212ENST00000573153 PTTG2Q9NZH5 202 aa12.54□□□□□ -0.4
SMG6-212ENST00000573153 GSKIPQ9P0R6 139 aa12.54□□□□□ -0.4
SMG6-212ENST00000573153 FAM240BA0A1B0GVZ2 78 aa12.53□□□□□ -0.4
SMG6-212ENST00000573153 ISLRO14498 428 aa12.53□□□□□ -0.4
SMG6-212ENST00000573153 CCNKO75909 580 aa12.53□□□□□ -0.4
SMG6-212ENST00000573153 SCGB1D2O95969 90 aa12.53□□□□□ -0.4
SMG6-212ENST00000573153 METTL15P1P0C7V9 234 aa12.53□□□□□ -0.4
SMG6-212ENST00000573153 GATA2P23769 480 aaPredicted RBP12.53□□□□□ -0.4
SMG6-212ENST00000573153 MEOX2P50222 304 aa12.53□□□□□ -0.4
SMG6-212ENST00000573153 GDF5OSQ5U4N7 250 aa12.53□□□□□ -0.4
SMG6-212ENST00000573153 C12orf45Q8N5I9 185 aaPredicted RBP12.53□□□□□ -0.4
SMG6-212ENST00000573153 OR10P1Q8NGE3 313 aa12.53□□□□□ -0.4
SMG6-212ENST00000573153 PPP1R14BQ96C90 147 aa12.53□□□□□ -0.4
SMG6-212ENST00000573153 C11orf1Q9H5F2 150 aa12.53□□□□□ -0.4
SMG6-212ENST00000573153 IGHV4-28A0A0C4DH34 117 aa12.52□□□□□ -0.41
SMG6-212ENST00000573153 CCSO14618 274 aa12.52□□□□□ -0.41
SMG6-212ENST00000573153 DEDDO75618 318 aa12.52□□□□□ -0.41
SMG6-212ENST00000573153 IL5P05113 134 aa12.52□□□□□ -0.41
SMG6-212ENST00000573153 GALR1P47211 349 aa12.52□□□□□ -0.41
SMG6-212ENST00000573153 NUTF2P61970 127 aaKnown RBP12.52□□□□□ -0.41
SMG6-212ENST00000573153 IL15RAQ13261 267 aa12.52□□□□□ -0.41
SMG6-212ENST00000573153 ZNF846Q147U1 533 aa12.52□□□□□ -0.41
SMG6-212ENST00000573153 SPATA31B1PQ5VZV4 182 aa12.52□□□□□ -0.41
SMG6-212ENST00000573153 FOXI2Q6ZQN5 318 aa12.52□□□□□ -0.41
SMG6-212ENST00000573153 TMEM147Q9BVK8 224 aa12.52□□□□□ -0.41
SMG6-212ENST00000573153 C1QTNF4Q9BXJ3 329 aa12.52□□□□□ -0.41
SMG6-212ENST00000573153 SLC25A32Q9H2D1 315 aa12.52□□□□□ -0.41
SMG6-212ENST00000573153 ELOA3CA0A087WX78 387 aaPredicted RBP12.51□□□□□ -0.41
SMG6-212ENST00000573153 SMCO3A2RU48 225 aa12.51□□□□□ -0.41
SMG6-212ENST00000573153 H3BRN7 92 aa12.51□□□□□ -0.41
SMG6-212ENST00000573153 UPK1BO75841 260 aa12.51□□□□□ -0.41
SMG6-212ENST00000573153 MIFP14174 115 aa12.51□□□□□ -0.41
SMG6-212ENST00000573153 ORM2P19652 201 aa12.51□□□□□ -0.41
SMG6-212ENST00000573153 TEPPQ6URK8 271 aa12.51□□□□□ -0.41
SMG6-212ENST00000573153 OR1B1Q8NGR6 318 aa12.51□□□□□ -0.41
SMG6-212ENST00000573153 C2orf50Q96LR7 162 aa12.51□□□□□ -0.41
SMG6-212ENST00000573153 MFFQ9GZY8 342 aa12.51□□□□□ -0.41
SMG6-212ENST00000573153 HRH4Q9H3N8 390 aa12.51□□□□□ -0.41
SMG6-212ENST00000573153 SAV1Q9H4B6 383 aaPredicted RBP12.51□□□□□ -0.41
SMG6-212ENST00000573153 CLEC5AQ9NY25 188 aa12.51□□□□□ -0.41
SMG6-212ENST00000573153 RRAS2P62070 204 aaPredicted RBP12.5□□□□□ -0.41
SMG6-212ENST00000573153 ARL16Q0P5N6 197 aa12.5□□□□□ -0.41
SMG6-212ENST00000573153 PXDC1Q5TGL8 231 aa12.5□□□□□ -0.41
SMG6-212ENST00000573153 SHANK2-AS3Q9BTD1 123 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms