RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 CIARTQ8N365 385 aaPredicted RBP13.03□□□□□ -0.32
RAB40B-206ENST00000571995 HIGD1CA8MV81 97 aa13.02□□□□□ -0.32
RAB40B-206ENST00000571995 C2orf83Q53S99 150 aa13.02□□□□□ -0.33
RAB40B-206ENST00000571995 RNF2Q99496 336 aa13.02□□□□□ -0.33
RAB40B-206ENST00000571995 NDUFA4L2Q9NRX3 87 aa13.02□□□□□ -0.33
RAB40B-206ENST00000571995 TCRBV4S1A1TA0A5B7 111 aa13.02□□□□□ -0.33
RAB40B-206ENST00000571995 SELENOTP62341 195 aa13.02□□□□□ -0.33
RAB40B-206ENST00000571995 Q9H3A6 140 aa13.02□□□□□ -0.33
RAB40B-206ENST00000571995 ST6GALNAC6Q969X2 333 aa13.01□□□□□ -0.33
RAB40B-206ENST00000571995 HECTD1Q9ULT8 2610 aa13.01□□□□□ -0.33
RAB40B-206ENST00000571995 M0R2Z0 102 aa13.01□□□□□ -0.33
RAB40B-206ENST00000571995 ZNF138P52744 262 aa13.01□□□□□ -0.33
RAB40B-206ENST00000571995 VMO1Q7Z5L0 202 aa13.01□□□□□ -0.33
RAB40B-206ENST00000571995 OR5AN1Q8NGI8 311 aa13.01□□□□□ -0.33
RAB40B-206ENST00000571995 FXYD7P58549 80 aa13.01□□□□□ -0.33
RAB40B-206ENST00000571995 CLEC19AQ6UXS0 136 aa13.01□□□□□ -0.33
RAB40B-206ENST00000571995 TMEM167AQ8TBQ9 72 aa13.01□□□□□ -0.33
RAB40B-206ENST00000571995 TNRC6BQ9UPQ9 1833 aaKnown RBP13.01□□□□□ -0.33
RAB40B-206ENST00000571995 PRB1P04280 392 aa13□□□□□ -0.33
RAB40B-206ENST00000571995 CGB3P0DN86 165 aa13□□□□□ -0.33
RAB40B-206ENST00000571995 CGB7P0DN87 165 aa13□□□□□ -0.33
RAB40B-206ENST00000571995 PF4V1P10720 104 aa13□□□□□ -0.33
RAB40B-206ENST00000571995 SRD5A1P18405 259 aa13□□□□□ -0.33
RAB40B-206ENST00000571995 RUSC1-AS1Q66K80 236 aa13□□□□□ -0.33
RAB40B-206ENST00000571995 DMRT1Q9Y5R6 373 aa13□□□□□ -0.33
RAB40B-206ENST00000571995 NBR2O15453 112 aa13□□□□□ -0.33
RAB40B-206ENST00000571995 GGCTO75223 188 aaKnown RBP13□□□□□ -0.33
RAB40B-206ENST00000571995 SCGB2A1O75556 95 aa13□□□□□ -0.33
RAB40B-206ENST00000571995 LCN12Q6JVE5 192 aa13□□□□□ -0.33
RAB40B-206ENST00000571995 LCNL1Q6ZST4 164 aa13□□□□□ -0.33
RAB40B-206ENST00000571995 C17orf77Q96MU5 243 aa13□□□□□ -0.33
RAB40B-206ENST00000571995 FBXL7Q9UJT9 491 aa13□□□□□ -0.33
RAB40B-206ENST00000571995 ZNF257Q9Y2Q1 563 aa13□□□□□ -0.33
RAB40B-206ENST00000571995 DIRC3C9JPN6 131 aa13□□□□□ -0.33
RAB40B-206ENST00000571995 PKIAP61925 76 aa13□□□□□ -0.33
RAB40B-206ENST00000571995 CX3CL1P78423 397 aa13□□□□□ -0.33
RAB40B-206ENST00000571995 TEX36Q5VZQ5 186 aa13□□□□□ -0.33
RAB40B-206ENST00000571995 THYN1Q9P016 225 aa13□□□□□ -0.33
RAB40B-206ENST00000571995 LSM4Q9Y4Z0 139 aaKnown RBP13□□□□□ -0.33
RAB40B-206ENST00000571995 IGKV3-20P01619 116 aa12.99□□□□□ -0.33
RAB40B-206ENST00000571995 ZNF600Q6ZNG1 722 aa12.99□□□□□ -0.33
RAB40B-206ENST00000571995 ZNF833PQ6ZTB9 187 aa12.99□□□□□ -0.33
RAB40B-206ENST00000571995 BPIFA4PQ86YQ2 179 aa12.99□□□□□ -0.33
RAB40B-206ENST00000571995 BRS3P32247 399 aa12.99□□□□□ -0.33
RAB40B-206ENST00000571995 CYB5R2Q6BCY4 276 aa12.99□□□□□ -0.33
RAB40B-206ENST00000571995 Q8TAT8 98 aa12.99□□□□□ -0.33
RAB40B-206ENST00000571995 TBL2Q9Y4P3 447 aaKnown RBP12.99□□□□□ -0.33
RAB40B-206ENST00000571995 TMEM242Q9NWH2 141 aa12.99□□□□□ -0.33
RAB40B-206ENST00000571995 G3V318 75 aa12.98□□□□□ -0.33
RAB40B-206ENST00000571995 NDPQ00604 133 aa12.98□□□□□ -0.33
RAB40B-206ENST00000571995 GBGT1Q8N5D6 347 aa12.98□□□□□ -0.33
RAB40B-206ENST00000571995 PPP1R14DQ9NXH3 145 aa12.98□□□□□ -0.33
RAB40B-206ENST00000571995 TRAV40A0A0B4J280 105 aa12.98□□□□□ -0.33
RAB40B-206ENST00000571995 PRR20EP86478 221 aa12.98□□□□□ -0.33
RAB40B-206ENST00000571995 PRR20CP86479 221 aa12.98□□□□□ -0.33
RAB40B-206ENST00000571995 PRR20DP86480 221 aa12.98□□□□□ -0.33
RAB40B-206ENST00000571995 PRR20BP86481 221 aa12.98□□□□□ -0.33
RAB40B-206ENST00000571995 PRR20AP86496 221 aa12.98□□□□□ -0.33
RAB40B-206ENST00000571995 NUDT10Q8NFP7 164 aa12.98□□□□□ -0.33
RAB40B-206ENST00000571995 CACNG8Q8WXS5 425 aa12.98□□□□□ -0.33
RAB40B-206ENST00000571995 NUDT11Q96G61 164 aa12.98□□□□□ -0.33
RAB40B-206ENST00000571995 SSX8Q7RTT4 187 aa12.98□□□□□ -0.33
RAB40B-206ENST00000571995 ARPC1AQ92747 370 aa12.98□□□□□ -0.33
RAB40B-206ENST00000571995 UFC1Q9Y3C8 167 aa12.98□□□□□ -0.33
RAB40B-206ENST00000571995 HIST1H1EP10412 219 aaKnown RBP12.97□□□□□ -0.33
RAB40B-206ENST00000571995 ERASQ7Z444 233 aa12.97□□□□□ -0.33
RAB40B-206ENST00000571995 ZNF664Q8N3J9 261 aa12.97□□□□□ -0.33
RAB40B-206ENST00000571995 PRSS3P2Q8NHM4 247 aa12.97□□□□□ -0.33
RAB40B-206ENST00000571995 CRYBG3Q68DQ2 2970 aa12.97□□□□□ -0.33
RAB40B-206ENST00000571995 FAM90A9PA6NNJ1 464 aa12.97□□□□□ -0.33
RAB40B-206ENST00000571995 SNAI2O43623 268 aa12.97□□□□□ -0.33
RAB40B-206ENST00000571995 GLMPQ8WWB7 406 aa12.97□□□□□ -0.33
RAB40B-206ENST00000571995 C14orf144Q96I85 54 aa12.97□□□□□ -0.33
RAB40B-206ENST00000571995 SLC25A2Q9BXI2 301 aa12.97□□□□□ -0.33
RAB40B-206ENST00000571995 FAM106CPP0CH98 169 aa12.96□□□□□ -0.33
RAB40B-206ENST00000571995 ACTL10Q5JWF8 245 aa12.96□□□□□ -0.33
RAB40B-206ENST00000571995 CENPVQ7Z7K6 275 aaPredicted RBP12.96□□□□□ -0.33
RAB40B-206ENST00000571995 C5orf17Q8NAS9 161 aa12.96□□□□□ -0.33
RAB40B-206ENST00000571995 C21orf62Q9NYP8 219 aa12.96□□□□□ -0.33
RAB40B-206ENST00000571995 KLF2Q9Y5W3 355 aaPredicted RBP12.96□□□□□ -0.33
RAB40B-206ENST00000571995 ADORA2A-AS1P86434 159 aa12.96□□□□□ -0.33
RAB40B-206ENST00000571995 VWC2Q2TAL6 325 aa12.96□□□□□ -0.33
RAB40B-206ENST00000571995 PATE2Q6UY27 113 aa12.96□□□□□ -0.33
RAB40B-206ENST00000571995 C1orf159Q96HA4 380 aa12.96□□□□□ -0.33
RAB40B-206ENST00000571995 PARD6GQ9BYG4 376 aaPredicted RBP12.96□□□□□ -0.33
RAB40B-206ENST00000571995 EPDR1Q9UM22 224 aa12.96□□□□□ -0.33
RAB40B-206ENST00000571995 DSCAML1Q8TD84 2053 aa12.96□□□□□ -0.34
RAB40B-206ENST00000571995 FCN3O75636 299 aa12.96□□□□□ -0.34
RAB40B-206ENST00000571995 PDLIM4P50479 330 aa12.96□□□□□ -0.34
RAB40B-206ENST00000571995 MFAP4P55083 255 aa12.96□□□□□ -0.34
RAB40B-206ENST00000571995 RNASEH2CQ8TDP1 164 aaKnown RBP12.96□□□□□ -0.34
RAB40B-206ENST00000571995 GPX4P36969 197 aaPredicted RBP12.95□□□□□ -0.34
RAB40B-206ENST00000571995 IGKV2-40A0A087WW87 121 aaPredicted RBP12.95□□□□□ -0.34
RAB40B-206ENST00000571995 IGKV2D-40P01614 121 aaPredicted RBP12.95□□□□□ -0.34
RAB40B-206ENST00000571995 MAS1LP35410 378 aa12.95□□□□□ -0.34
RAB40B-206ENST00000571995 ZNF329Q86UD4 541 aa12.95□□□□□ -0.34
RAB40B-206ENST00000571995 Q8N7P7 452 aa12.95□□□□□ -0.34
RAB40B-206ENST00000571995 TXNDC17Q9BRA2 123 aa12.95□□□□□ -0.34
RAB40B-206ENST00000571995 RABAC1Q9UI14 185 aa12.95□□□□□ -0.34
RAB40B-206ENST00000571995 SVEP1Q4LDE5 3571 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms