RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 C1orf194Q5T5A4 169 aa9.17□□□□□ -0.94
CDRT1-206ENST00000571263 PATE2Q6UY27 113 aa9.17□□□□□ -0.94
CDRT1-206ENST00000571263 REC114Q7Z4M0 266 aa9.17□□□□□ -0.94
CDRT1-206ENST00000571263 C1QL4Q86Z23 238 aa9.17□□□□□ -0.94
CDRT1-206ENST00000571263 OR11H1Q8NG94 326 aa9.17□□□□□ -0.94
CDRT1-206ENST00000571263 TMEM190Q8WZ59 177 aa9.17□□□□□ -0.94
CDRT1-206ENST00000571263 GRAMD2BQ96HH9 432 aa9.17□□□□□ -0.94
CDRT1-206ENST00000571263 RCC1LQ96I51 464 aaKnown RBP9.17□□□□□ -0.94
CDRT1-206ENST00000571263 GPR82Q96P67 336 aa9.17□□□□□ -0.94
CDRT1-206ENST00000571263 SLC25A39Q9BZJ4 359 aaPredicted RBP9.17□□□□□ -0.94
CDRT1-206ENST00000571263 TMEM231Q9H6L2 316 aa9.17□□□□□ -0.94
CDRT1-206ENST00000571263 VSIRQ9H7M9 311 aa9.17□□□□□ -0.94
CDRT1-206ENST00000571263 ZFAND3Q9H8U3 227 aa9.17□□□□□ -0.94
CDRT1-206ENST00000571263 RFNGQ9Y644 331 aa9.17□□□□□ -0.94
CDRT1-206ENST00000571263 MXRA5Q9NR99 2828 aa9.16□□□□□ -0.94
CDRT1-206ENST00000571263 TRBV12-3P01733 135 aa9.16□□□□□ -0.94
CDRT1-206ENST00000571263 CD5P06127 495 aa9.16□□□□□ -0.94
CDRT1-206ENST00000571263 NMBP08949 121 aa9.16□□□□□ -0.94
CDRT1-206ENST00000571263 STAG3L2P0CL84 134 aa9.16□□□□□ -0.94
CDRT1-206ENST00000571263 STAG3L3P0CL85 134 aa9.16□□□□□ -0.94
CDRT1-206ENST00000571263 CRYBB3P26998 211 aa9.16□□□□□ -0.94
CDRT1-206ENST00000571263 TAGLN2P37802 199 aaKnown RBP9.16□□□□□ -0.94
CDRT1-206ENST00000571263 MYCNOSP40205 109 aa9.16□□□□□ -0.94
CDRT1-206ENST00000571263 PSMB3P49720 205 aa9.16□□□□□ -0.94
CDRT1-206ENST00000571263 PMS2P11Q13670 270 aa9.16□□□□□ -0.94
CDRT1-206ENST00000571263 LYPD6BQ8NI32 183 aa9.16□□□□□ -0.94
CDRT1-206ENST00000571263 SFT2D1Q8WV19 159 aa9.16□□□□□ -0.94
CDRT1-206ENST00000571263 MARC2Q969Z3 335 aa9.16□□□□□ -0.94
CDRT1-206ENST00000571263 SHANK2-AS3Q9BTD1 123 aa9.16□□□□□ -0.94
CDRT1-206ENST00000571263 SEPSECSQ9HD40 501 aaKnown RBP9.16□□□□□ -0.94
CDRT1-206ENST00000571263 DAZ1Q9NQZ3 744 aaKnown RBP9.16□□□□□ -0.94
CDRT1-206ENST00000571263 DOK5Q9P104 306 aa9.16□□□□□ -0.94
CDRT1-206ENST00000571263 PEMTQ9UBM1 199 aa9.16□□□□□ -0.94
CDRT1-206ENST00000571263 IGHV4OR15-8A0A075B7B6 117 aa9.15□□□□□ -0.94
CDRT1-206ENST00000571263 A0A087WW49 117 aa9.15□□□□□ -0.94
CDRT1-206ENST00000571263 ZNF320A2RRD8 509 aa9.15□□□□□ -0.94
CDRT1-206ENST00000571263 MAP1LC3B2A6NCE7 125 aa9.15□□□□□ -0.94
CDRT1-206ENST00000571263 RPL7P18124 248 aaKnown RBP9.15□□□□□ -0.94
CDRT1-206ENST00000571263 HOXD3P31249 432 aaPredicted RBP9.15□□□□□ -0.94
CDRT1-206ENST00000571263 SRSF2Q01130 221 aaKnown RBP9.15□□□□□ -0.94
CDRT1-206ENST00000571263 KLF5Q13887 457 aaPredicted RBP9.15□□□□□ -0.94
CDRT1-206ENST00000571263 USF2Q15853 346 aaPredicted RBP9.15□□□□□ -0.94
CDRT1-206ENST00000571263 NDUFA5Q16718 116 aa9.15□□□□□ -0.94
CDRT1-206ENST00000571263 GCSAMLQ5JQS6 135 aa9.15□□□□□ -0.94
CDRT1-206ENST00000571263 BPIFA4PQ86YQ2 179 aa9.15□□□□□ -0.94
CDRT1-206ENST00000571263 C20orf24Q9BUV8 137 aa9.15□□□□□ -0.94
CDRT1-206ENST00000571263 ELOVL1Q9BW60 279 aa9.15□□□□□ -0.94
CDRT1-206ENST00000571263 MAP1LC3BQ9GZQ8 125 aa9.15□□□□□ -0.94
CDRT1-206ENST00000571263 TMEM167BQ9NRX6 74 aa9.15□□□□□ -0.94
CDRT1-206ENST00000571263 MED9Q9NWA0 146 aa9.15□□□□□ -0.94
CDRT1-206ENST00000571263 TMEM14CQ9P0S9 112 aa9.15□□□□□ -0.94
CDRT1-206ENST00000571263 IGHV3-35A0A0C4DH35 117 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 ZNF98A6NK75 572 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 A8MWP6 167 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 H3BRN7 92 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 M0QZ24 198 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 CCL24O00175 119 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 IFNA1P01562 189 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 FHITP49789 147 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 MEOX2P50222 304 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 FHL3Q13643 280 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 ZNF726P1Q15940 193 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 KRTAP24-1Q3LI83 254 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 LCN15Q6UWW0 184 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 IL34Q6ZMJ4 242 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 C8orf86Q6ZUL3 223 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 PRIMA1Q86XR5 153 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 OR4F17Q8NGA8 305 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 FAM210AQ96ND0 272 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 OR4F4Q96R69 305 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 CITED1Q99966 193 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 OR51M1Q9H341 326 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 SLC25A22Q9H936 323 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 U3KQE9 123 aa9.14□□□□□ -0.95
CDRT1-206ENST00000571263 NSD1Q96L73 2696 aaPredicted RBP9.13□□□□□ -0.95
CDRT1-206ENST00000571263 BUB3O43684 328 aa9.13□□□□□ -0.95
CDRT1-206ENST00000571263 GUK1Q16774 197 aa9.13□□□□□ -0.95
CDRT1-206ENST00000571263 MIR17HGQ75NE6 70 aa9.13□□□□□ -0.95
CDRT1-206ENST00000571263 OR8I2Q8N0Y5 310 aa9.13□□□□□ -0.95
CDRT1-206ENST00000571263 C11orf44Q8N8P7 122 aa9.13□□□□□ -0.95
CDRT1-206ENST00000571263 ZNF414Q96IQ9 312 aa9.13□□□□□ -0.95
CDRT1-206ENST00000571263 UHRF2Q96PU4 802 aa9.13□□□□□ -0.95
CDRT1-206ENST00000571263 TXNDC17Q9BRA2 123 aa9.13□□□□□ -0.95
CDRT1-206ENST00000571263 PAXXQ9BUH6 204 aa9.13□□□□□ -0.95
CDRT1-206ENST00000571263 ZNF747Q9BV97 191 aa9.13□□□□□ -0.95
CDRT1-206ENST00000571263 NKX6-2Q9C056 277 aaPredicted RBP9.13□□□□□ -0.95
CDRT1-206ENST00000571263 HRH4Q9H3N8 390 aa9.13□□□□□ -0.95
CDRT1-206ENST00000571263 IGHV7-4-1A0A0J9YVY3 117 aa9.12□□□□□ -0.95
CDRT1-206ENST00000571263 HELTA6NFD8 242 aa9.12□□□□□ -0.95
CDRT1-206ENST00000571263 OR7C2O60412 319 aa9.12□□□□□ -0.95
CDRT1-206ENST00000571263 GALR1P47211 349 aa9.12□□□□□ -0.95
CDRT1-206ENST00000571263 SYNJ2BPP57105 145 aa9.12□□□□□ -0.95
CDRT1-206ENST00000571263 SAMD13Q5VXD3 122 aa9.12□□□□□ -0.95
CDRT1-206ENST00000571263 UNQ9165/PRO28630Q6UXU0 137 aa9.12□□□□□ -0.95
CDRT1-206ENST00000571263 C12orf54Q6X4T0 127 aa9.12□□□□□ -0.95
CDRT1-206ENST00000571263 SUN5Q8TC36 379 aa9.12□□□□□ -0.95
CDRT1-206ENST00000571263 RAX2Q96IS3 184 aa9.12□□□□□ -0.95
CDRT1-206ENST00000571263 FAM167A-AS1Q96KT0 104 aa9.12□□□□□ -0.95
CDRT1-206ENST00000571263 SMDT1Q9H4I9 107 aa9.12□□□□□ -0.95
CDRT1-206ENST00000571263 MANBALQ9NQG1 85 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms