RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 FAM90A26D6RGX4 464 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 F8WDY8 70 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 FCN1O00602 326 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 FCGR3BO75015 233 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 GAS8-AS1O95177 125 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 IGKV1-39P01597 117 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 IGKV1D-39P04432 117 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 TPT1P13693 172 aaKnown RBP4.98□□□□□ -1.61
CHD3-213ENST00000571249 NKX2-1P43699 371 aaPredicted RBP4.98□□□□□ -1.61
CHD3-213ENST00000571249 NPBWR1P48145 328 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 Q3ZCU0 254 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 ZNF585BQ52M93 769 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 ALKAL2Q6UX46 152 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 ZNF66Q6ZN08 573 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 UBAC2Q8NBM4 344 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 NPBQ8NG41 125 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 OR5T1Q8NG75 326 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 OR52M1Q8NGK5 317 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 IL1F10Q8WWZ1 152 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 CACNG8Q8WXS5 425 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 ARL11Q969Q4 196 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 GPR146Q96CH1 333 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 ZNF471Q9BX82 626 aaPredicted RBP4.98□□□□□ -1.61
CHD3-213ENST00000571249 FBXL15Q9H469 300 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 CRCT1Q9UGL9 99 aa4.98□□□□□ -1.61
CHD3-213ENST00000571249 RCL1Q9Y2P8 373 aaKnown RBP4.98□□□□□ -1.61
CHD3-213ENST00000571249 DEFB131BA0A096LNP1 70 aa4.97□□□□□ -1.61
CHD3-213ENST00000571249 MFSD2BA6NFX1 497 aa4.97□□□□□ -1.61
CHD3-213ENST00000571249 SLC31A2O15432 143 aa4.97□□□□□ -1.61
CHD3-213ENST00000571249 RBFOX2O43251 390 aaKnown RBP eCLIP4.97□□□□□ -1.61
CHD3-213ENST00000571249 NDUFA3O95167 84 aa4.97□□□□□ -1.61
CHD3-213ENST00000571249 SPDEFO95238 335 aa4.97□□□□□ -1.61
CHD3-213ENST00000571249 IGKV1-5P01602 117 aa4.97□□□□□ -1.61
CHD3-213ENST00000571249 SERPINE2P07093 398 aa4.97□□□□□ -1.61
CHD3-213ENST00000571249 FGF2P09038 288 aa4.97□□□□□ -1.61
CHD3-213ENST00000571249 BRWD1-AS2P59051 145 aa4.97□□□□□ -1.61
CHD3-213ENST00000571249 S100A10P60903 97 aa4.97□□□□□ -1.61
CHD3-213ENST00000571249 SNRPEP62304 92 aaKnown RBP4.97□□□□□ -1.61
CHD3-213ENST00000571249 CATR1Q13166 79 aa4.97□□□□□ -1.61
CHD3-213ENST00000571249 PLGLAQ15195 96 aa4.97□□□□□ -1.61
CHD3-213ENST00000571249 MORN2Q502X0 79 aa4.97□□□□□ -1.61
CHD3-213ENST00000571249 LELP1Q5T871 98 aa4.97□□□□□ -1.61
CHD3-213ENST00000571249 THOC7Q6I9Y2 204 aaKnown RBP4.97□□□□□ -1.61
CHD3-213ENST00000571249 EIF5AL1Q6IS14 154 aaKnown RBP4.97□□□□□ -1.61
CHD3-213ENST00000571249 SLC25A48Q6ZT89 311 aaKnown RBP4.97□□□□□ -1.61
CHD3-213ENST00000571249 HSD17B13Q7Z5P4 300 aaPredicted RBP4.97□□□□□ -1.61
CHD3-213ENST00000571249 C6orf223Q8N319 242 aa4.97□□□□□ -1.61
CHD3-213ENST00000571249 C8orf31Q8N9H6 132 aa4.97□□□□□ -1.61
CHD3-213ENST00000571249 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.97□□□□□ -1.61
CHD3-213ENST00000571249 OR1L6Q8NGR2 347 aa4.97□□□□□ -1.61
CHD3-213ENST00000571249 CD300LFQ8TDQ1 290 aa4.97□□□□□ -1.61
CHD3-213ENST00000571249 CLCC1Q96S66 551 aa4.97□□□□□ -1.61
CHD3-213ENST00000571249 HSD17B10Q99714 261 aaKnown RBP4.97□□□□□ -1.61
CHD3-213ENST00000571249 CHRDL1Q9BU40 450 aa4.97□□□□□ -1.61
CHD3-213ENST00000571249 OR2S2Q9NQN1 319 aa4.97□□□□□ -1.61
CHD3-213ENST00000571249 LYRM2Q9NU23 88 aaPredicted RBP4.97□□□□□ -1.61
CHD3-213ENST00000571249 NACAE9PAV3 2078 aa4.96□□□□□ -1.61
CHD3-213ENST00000571249 IGHV3-43A0A0B4J1X8 118 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 A0A0G2JRQ6 117 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 A0A1W2PPQ1 181 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 H3BUA1 57 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 TNFSF12O43508 249 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 PROP1O75360 226 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 ATG12O94817 140 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 IGHV3-43DP0DP04 118 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 PVALBP20472 110 aaPredicted RBP4.96□□□□□ -1.62
CHD3-213ENST00000571249 CBLN1P23435 193 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 PPP1CCP36873 323 aaKnown RBP4.96□□□□□ -1.62
CHD3-213ENST00000571249 LPAR6P43657 344 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 PAX9P55771 341 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 TAS2R30P59541 319 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 BAXQ07812 192 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 GNMTQ14749 295 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 MLANAQ16655 118 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 COMMD7Q86VX2 200 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 ODF3L1Q8IXM7 274 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 ZNF439Q8NDP4 499 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 OR5B3Q8NH48 314 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 OR51H1Q8NH63 302 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 RAB40CQ96S21 281 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 GINS3Q9BRX5 216 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 SLC25A31Q9H0C2 315 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 CSTL1Q9H114 145 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 OR2D2Q9H210 308 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 SDHAF2Q9NX18 166 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 MLXQ9UH92 298 aa4.96□□□□□ -1.62
CHD3-213ENST00000571249 LSM5Q9Y4Y9 91 aaKnown RBP4.96□□□□□ -1.62
CHD3-213ENST00000571249 RBM7Q9Y580 266 aaKnown RBP4.96□□□□□ -1.62
CHD3-213ENST00000571249 RRHO14718 337 aa4.95□□□□□ -1.62
CHD3-213ENST00000571249 RAB29O14966 203 aa4.95□□□□□ -1.62
CHD3-213ENST00000571249 NDUFB4O95168 129 aa4.95□□□□□ -1.62
CHD3-213ENST00000571249 TMEM50AO95807 157 aa4.95□□□□□ -1.62
CHD3-213ENST00000571249 SEC11BP0C7V7 166 aa4.95□□□□□ -1.62
CHD3-213ENST00000571249 DUTP33316 252 aaKnown RBP4.95□□□□□ -1.62
CHD3-213ENST00000571249 ZNF137PP52743 207 aa4.95□□□□□ -1.62
CHD3-213ENST00000571249 KRTAP10-1P60331 282 aa4.95□□□□□ -1.62
CHD3-213ENST00000571249 RPL30P62888 115 aaKnown RBP4.95□□□□□ -1.62
CHD3-213ENST00000571249 DLK1P80370 383 aa4.95□□□□□ -1.62
CHD3-213ENST00000571249 RPL7L1Q6DKI1 246 aaKnown RBP4.95□□□□□ -1.62
CHD3-213ENST00000571249 PRR27Q6MZM9 219 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 347.9 ms