RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 GGACTQ9BVM4 153 aa10□□□□□ -0.81
CCDC40-205ENST00000571028 SIGLEC8Q9NYZ4 499 aa10□□□□□ -0.81
CCDC40-205ENST00000571028 DOK5Q9P104 306 aa10□□□□□ -0.81
CCDC40-205ENST00000571028 HNRNPCP07910 306 aaKnown RBP eCLIP9.99□□□□□ -0.81
CCDC40-205ENST00000571028 C8orf88P0DMB2 117 aa9.99□□□□□ -0.81
CCDC40-205ENST00000571028 ORM2P19652 201 aa9.99□□□□□ -0.81
CCDC40-205ENST00000571028 NUP62P37198 522 aaPredicted RBP9.99□□□□□ -0.81
CCDC40-205ENST00000571028 RPL11P62913 178 aaKnown RBP9.99□□□□□ -0.81
CCDC40-205ENST00000571028 LCN12Q6JVE5 192 aa9.99□□□□□ -0.81
CCDC40-205ENST00000571028 TMEM61Q8N0U2 210 aa9.99□□□□□ -0.81
CCDC40-205ENST00000571028 BPIFCQ8NFQ6 507 aa9.99□□□□□ -0.81
CCDC40-205ENST00000571028 OR1B1Q8NGR6 318 aa9.99□□□□□ -0.81
CCDC40-205ENST00000571028 RNF2Q99496 336 aa9.99□□□□□ -0.81
CCDC40-205ENST00000571028 TECRQ9NZ01 308 aaKnown RBP9.99□□□□□ -0.81
CCDC40-205ENST00000571028 RABAC1Q9UI14 185 aa9.99□□□□□ -0.81
CCDC40-205ENST00000571028 HSPB11Q9Y547 144 aa9.99□□□□□ -0.81
CCDC40-205ENST00000571028 AGPAT2O15120 278 aa9.98□□□□□ -0.81
CCDC40-205ENST00000571028 FGF7P21781 194 aa9.98□□□□□ -0.81
CCDC40-205ENST00000571028 TFPI2P48307 235 aa9.98□□□□□ -0.81
CCDC40-205ENST00000571028 AP2S1P53680 142 aaPredicted RBP9.98□□□□□ -0.81
CCDC40-205ENST00000571028 ATP6V1FQ16864 119 aa9.98□□□□□ -0.81
CCDC40-205ENST00000571028 WFDC3Q8IUB2 231 aa9.98□□□□□ -0.81
CCDC40-205ENST00000571028 GBGT1Q8N5D6 347 aa9.98□□□□□ -0.81
CCDC40-205ENST00000571028 MGST2Q99735 147 aa9.98□□□□□ -0.81
CCDC40-205ENST00000571028 A0A1W2PS18 150 aa9.97□□□□□ -0.81
CCDC40-205ENST00000571028 A8MZ25 164 aa9.97□□□□□ -0.81
CCDC40-205ENST00000571028 FNDC10F2Z333 226 aa9.97□□□□□ -0.81
CCDC40-205ENST00000571028 DFFBO76075 338 aa9.97□□□□□ -0.81
CCDC40-205ENST00000571028 OR5G3P0C626 314 aa9.97□□□□□ -0.81
CCDC40-205ENST00000571028 LINC00869P0C866 280 aa9.97□□□□□ -0.81
CCDC40-205ENST00000571028 CRYBB3P26998 211 aa9.97□□□□□ -0.81
CCDC40-205ENST00000571028 BMI1P35226 326 aa9.97□□□□□ -0.81
CCDC40-205ENST00000571028 CAMLGP49069 296 aa9.97□□□□□ -0.81
CCDC40-205ENST00000571028 RAB31Q13636 194 aa9.97□□□□□ -0.81
CCDC40-205ENST00000571028 LAMTOR1Q6IAA8 161 aa9.97□□□□□ -0.81
CCDC40-205ENST00000571028 TCF24Q7RTU0 167 aa9.97□□□□□ -0.81
CCDC40-205ENST00000571028 ASB13Q8WXK3 278 aa9.97□□□□□ -0.81
CCDC40-205ENST00000571028 TUBA4BQ9H853 241 aa9.97□□□□□ -0.81
CCDC40-205ENST00000571028 C19orf73Q9NVV2 129 aa9.97□□□□□ -0.81
CCDC40-205ENST00000571028 WDR83OSQ9Y284 106 aa9.97□□□□□ -0.81
CCDC40-205ENST00000571028 ZNF785A8K8V0 405 aa9.96□□□□□ -0.82
CCDC40-205ENST00000571028 LY6G6CO95867 125 aa9.96□□□□□ -0.82
CCDC40-205ENST00000571028 EIF2B2P49770 351 aaKnown RBP9.96□□□□□ -0.82
CCDC40-205ENST00000571028 HAGHQ16775 308 aa9.96□□□□□ -0.82
CCDC40-205ENST00000571028 MIC13Q5XKP0 118 aa9.96□□□□□ -0.82
CCDC40-205ENST00000571028 ZNF546Q86UE3 836 aa9.96□□□□□ -0.82
CCDC40-205ENST00000571028 INO80EQ8NBZ0 244 aaPredicted RBP9.96□□□□□ -0.82
CCDC40-205ENST00000571028 OR2K2Q8NGT1 345 aa9.96□□□□□ -0.82
CCDC40-205ENST00000571028 GRAMD2BQ96HH9 432 aa9.96□□□□□ -0.82
CCDC40-205ENST00000571028 ATP5SQ99766 215 aa9.96□□□□□ -0.82
CCDC40-205ENST00000571028 TMEM231Q9H6L2 316 aa9.96□□□□□ -0.82
CCDC40-205ENST00000571028 A0A1B0GVG6 124 aa9.95□□□□□ -0.82
CCDC40-205ENST00000571028 IFNA5P01569 189 aa9.95□□□□□ -0.82
CCDC40-205ENST00000571028 SELENOTP62341 195 aa9.95□□□□□ -0.82
CCDC40-205ENST00000571028 VWC2Q2TAL6 325 aa9.95□□□□□ -0.82
CCDC40-205ENST00000571028 Q8N1Y9 231 aa9.95□□□□□ -0.82
CCDC40-205ENST00000571028 LINC00476Q8WZB0 136 aa9.95□□□□□ -0.82
CCDC40-205ENST00000571028 ARL6Q9H0F7 186 aa9.95□□□□□ -0.82
CCDC40-205ENST00000571028 VSIRQ9H7M9 311 aa9.95□□□□□ -0.82
CCDC40-205ENST00000571028 SLC25A22Q9H936 323 aa9.95□□□□□ -0.82
CCDC40-205ENST00000571028 WFDC1Q9HC57 220 aa9.95□□□□□ -0.82
CCDC40-205ENST00000571028 PFDN2Q9UHV9 154 aa9.95□□□□□ -0.82
CCDC40-205ENST00000571028 SLC45A2Q9UMX9 530 aa9.95□□□□□ -0.82
CCDC40-205ENST00000571028 SORL1Q92673 2214 aa9.95□□□□□ -0.82
CCDC40-205ENST00000571028 DNASE2O00115 360 aaPredicted RBP9.94□□□□□ -0.82
CCDC40-205ENST00000571028 ARPC5O15511 151 aa9.94□□□□□ -0.82
CCDC40-205ENST00000571028 HYPMO75409 117 aa9.94□□□□□ -0.82
CCDC40-205ENST00000571028 CFDP00746 253 aaPredicted RBP9.94□□□□□ -0.82
CCDC40-205ENST00000571028 CD7P09564 240 aa9.94□□□□□ -0.82
CCDC40-205ENST00000571028 CD81P60033 236 aa9.94□□□□□ -0.82
CCDC40-205ENST00000571028 LEMD1Q68G75 181 aa9.94□□□□□ -0.82
CCDC40-205ENST00000571028 GTSCR1Q86UQ5 136 aa9.94□□□□□ -0.82
CCDC40-205ENST00000571028 ZNF709Q8N972 641 aa9.94□□□□□ -0.82
CCDC40-205ENST00000571028 STXBP6Q8NFX7 210 aa9.94□□□□□ -0.82
CCDC40-205ENST00000571028 SCGB1C1Q8TD33 95 aa9.94□□□□□ -0.82
CCDC40-205ENST00000571028 UHRF2Q96PU4 802 aa9.94□□□□□ -0.82
CCDC40-205ENST00000571028 GGTLC1Q9BX51 225 aa9.94□□□□□ -0.82
CCDC40-205ENST00000571028 FBXL17Q9UF56 701 aa9.94□□□□□ -0.82
CCDC40-205ENST00000571028 HIGD1AQ9Y241 93 aa9.94□□□□□ -0.82
CCDC40-205ENST00000571028 TRAV25A0A0B4J276 109 aa9.93□□□□□ -0.82
CCDC40-205ENST00000571028 G3V3Q6 166 aa9.93□□□□□ -0.82
CCDC40-205ENST00000571028 TSPAN4O14817 238 aa9.93□□□□□ -0.82
CCDC40-205ENST00000571028 COX7A2P2O60397 106 aa9.93□□□□□ -0.82
CCDC40-205ENST00000571028 B2MP61769 119 aa9.93□□□□□ -0.82
CCDC40-205ENST00000571028 C16orf54Q6UWD8 224 aa9.93□□□□□ -0.82
CCDC40-205ENST00000571028 OR8I2Q8N0Y5 310 aa9.93□□□□□ -0.82
CCDC40-205ENST00000571028 STPG3Q8N7X2 389 aa9.93□□□□□ -0.82
CCDC40-205ENST00000571028 AQP10Q96PS8 301 aa9.93□□□□□ -0.82
CCDC40-205ENST00000571028 RSG1Q9BU20 258 aa9.93□□□□□ -0.82
CCDC40-205ENST00000571028 WDR61Q9GZS3 305 aaKnown RBP9.93□□□□□ -0.82
CCDC40-205ENST00000571028 UBQLN2Q9UHD9 624 aa9.93□□□□□ -0.82
CCDC40-205ENST00000571028 TNFSF18Q9UNG2 199 aa9.93□□□□□ -0.82
CCDC40-205ENST00000571028 PXMP4Q9Y6I8 212 aa9.93□□□□□ -0.82
CCDC40-205ENST00000571028 U3KQE9 123 aa9.93□□□□□ -0.82
CCDC40-205ENST00000571028 ALMS1Q8TCU4 4167 aa9.93□□□□□ -0.82
CCDC40-205ENST00000571028 HERC2O95714 4834 aa9.92□□□□□ -0.82
CCDC40-205ENST00000571028 BUB3O43684 328 aa9.92□□□□□ -0.82
CCDC40-205ENST00000571028 PAFAH1B2P68402 229 aa9.92□□□□□ -0.82
CCDC40-205ENST00000571028 OPCMLQ14982 345 aa9.92□□□□□ -0.82
CCDC40-205ENST00000571028 FAM90A2PQ658T7 463 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms