RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 TRAPPC2BP0DI82 140 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 ANXA3P12429 323 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 IGLL1P15814 213 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 LPAR6P43657 344 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 RPL27AP46776 148 aaKnown RBP2.83□□□□□ -1.96
NUP88-202ENST00000570937 PIGPP57054 158 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 EIF4EBP1Q13541 118 aaPredicted RBP2.83□□□□□ -1.96
NUP88-202ENST00000570937 POU2AF1Q16633 256 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 ANKRD55Q3KP44 614 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 PYDC2Q56P42 97 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 KPRPQ5T749 579 aaPredicted RBP2.83□□□□□ -1.96
NUP88-202ENST00000570937 SSX9Q7RTT3 188 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 H2BFWTQ7Z2G1 175 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 AKAP14Q86UN6 197 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 ZNF429Q86V71 674 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 STX12Q86Y82 276 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 VKORC1L1Q8N0U8 176 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 PUSL1Q8N0Z8 303 aaKnown RBP2.83□□□□□ -1.96
NUP88-202ENST00000570937 Q8N402 240 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 OR1L8Q8NGR8 309 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 OR5B3Q8NH48 314 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 OR4A16Q8NH70 328 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 RBMXL1Q96E39 390 aaKnown RBP2.83□□□□□ -1.96
NUP88-202ENST00000570937 C5orf30Q96GV9 206 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 CXorf58Q96LI9 332 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 TMEM56Q96MV1 263 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 OR5B12Q96R08 314 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 OR4C12Q96R67 309 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 P2RX4Q99571 388 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 PDCD10Q9BUL8 212 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 NXF2Q9GZY0 626 aaKnown RBP2.83□□□□□ -1.96
NUP88-202ENST00000570937 SLC2A9Q9NRM0 540 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 MCUBQ9NWR8 336 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 PEF1Q9UBV8 284 aaKnown RBP2.83□□□□□ -1.96
NUP88-202ENST00000570937 Q9UF83 564 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 KCNIP3Q9Y2W7 256 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 CBY1Q9Y3M2 126 aa2.83□□□□□ -1.96
NUP88-202ENST00000570937 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.82□□□□□ -1.96
NUP88-202ENST00000570937 TRBV7-1A0A0A6YYK4 115 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 ANKRD20A5PA0PJZ0 165 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 CENPXA8MT69 81 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 G3V4G9 280 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 H0Y980 276 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 UPK2O00526 184 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 OVOL1O14753 267 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 GATCO43716 136 aaKnown RBP2.82□□□□□ -1.96
NUP88-202ENST00000570937 SOX15O60248 233 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 S1PR2O95136 353 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 SNAPINO95295 136 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 IGHV3-11P01762 117 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 CRYGCP07315 174 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 CTSDP07339 412 aaPredicted RBP2.82□□□□□ -1.96
NUP88-202ENST00000570937 APELAP0DMC3 54 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 PSMB6P28072 239 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 G6PCP35575 357 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 SNCAP37840 140 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 MEOX2P50222 304 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 AKR1C2P52895 323 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 SUB1P53999 127 aaKnown RBP eCLIP2.82□□□□□ -1.96
NUP88-202ENST00000570937 OR2B8PP59922 312 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 RAB14P61106 215 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 RND3P61587 244 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 ERHP84090 104 aaKnown RBP2.82□□□□□ -1.96
NUP88-202ENST00000570937 RHOGP84095 191 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 RPEL1Q2QD12 228 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 TRIM16LQ309B1 348 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 DEFB136Q30KP8 78 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 LCE3AQ5TA76 89 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 TRIQKQ629K1 86 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 LHFPL1Q86WI0 220 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 KRTAP11-1Q8IUC1 163 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 SGPP2Q8IWX5 399 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 TOMM5Q8N4H5 51 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 OR51S1Q8NGJ8 323 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 OR13C8Q8NGS7 320 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 RNASE11Q8TAA1 199 aaKnown RBP2.82□□□□□ -1.96
NUP88-202ENST00000570937 LSM10Q969L4 123 aaKnown RBP2.82□□□□□ -1.96
NUP88-202ENST00000570937 HINT2Q9BX68 163 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 MIXL1Q9H2W2 232 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 MLXQ9UH92 298 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 RNF24Q9Y225 148 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 OR51B2Q9Y5P1 312 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 NBEAL1Q6ZS30 2694 aa2.82□□□□□ -1.96
NUP88-202ENST00000570937 VWFP04275 2813 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 TRBV9A0A0B4J1U6 114 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 TEX50A0A1B0GTY4 177 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 A0A1B0GVG6 124 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 NAP1L6A6NFF2 107 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 CORTO00230 105 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 GGCTO75223 188 aaKnown RBP2.81□□□□□ -1.96
NUP88-202ENST00000570937 SCGB2A1O75556 95 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 IFNA17P01571 189 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 OR13C7P0DN81 318 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 AREGP15514 252 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 ETV6P41212 452 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 HSPE1P61604 102 aaKnown RBP2.81□□□□□ -1.96
NUP88-202ENST00000570937 ZNF45Q02386 682 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 EGFEM1PQ0D2K5 195 aa2.81□□□□□ -1.96
NUP88-202ENST00000570937 EXOSC2Q13868 293 aaKnown RBP2.81□□□□□ -1.96
NUP88-202ENST00000570937 KLF5Q13887 457 aaPredicted RBP2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms