RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 IGLV2-8P01709 118 aa12.35□□□□□ -0.43
USP43-202ENST00000570475 FAM167A-AS1Q96KT0 104 aa12.35□□□□□ -0.43
USP43-202ENST00000570475 LY96Q9Y6Y9 160 aa12.35□□□□□ -0.43
USP43-202ENST00000570475 NCBP2LA6PVI3 153 aaKnown RBP12.34□□□□□ -0.43
USP43-202ENST00000570475 CGB3P0DN86 165 aa12.34□□□□□ -0.43
USP43-202ENST00000570475 CGB7P0DN87 165 aa12.34□□□□□ -0.43
USP43-202ENST00000570475 WFDC3Q8IUB2 231 aa12.34□□□□□ -0.43
USP43-202ENST00000570475 NUDT3O95989 172 aa12.34□□□□□ -0.43
USP43-202ENST00000570475 PCP4P48539 62 aa12.34□□□□□ -0.43
USP43-202ENST00000570475 GDF5OSQ5U4N7 250 aa12.34□□□□□ -0.43
USP43-202ENST00000570475 MUC15Q8N387 334 aa12.34□□□□□ -0.43
USP43-202ENST00000570475 TMEM70Q9BUB7 260 aa12.34□□□□□ -0.43
USP43-202ENST00000570475 RPP21Q9H633 154 aaKnown RBP12.34□□□□□ -0.43
USP43-202ENST00000570475 FCGR2BP31994 310 aaPredicted RBP12.34□□□□□ -0.43
USP43-202ENST00000570475 CFHR2P36980 270 aa12.34□□□□□ -0.43
USP43-202ENST00000570475 GUSBP1Q15486 140 aa12.34□□□□□ -0.43
USP43-202ENST00000570475 RUSC1-AS1Q66K80 236 aa12.34□□□□□ -0.43
USP43-202ENST00000570475 ETFRF1Q6IPR1 90 aa12.34□□□□□ -0.43
USP43-202ENST00000570475 EBLN2Q6P2I7 272 aa12.34□□□□□ -0.43
USP43-202ENST00000570475 SMIM27A0A1W2PRY6 76 aa12.33□□□□□ -0.43
USP43-202ENST00000570475 UQCRFS1P47985 274 aa12.33□□□□□ -0.43
USP43-202ENST00000570475 TMEM186Q96B77 213 aa12.33□□□□□ -0.43
USP43-202ENST00000570475 SMG1Q96Q15 3661 aaKnown RBP12.33□□□□□ -0.44
USP43-202ENST00000570475 IGLL1P15814 213 aa12.33□□□□□ -0.44
USP43-202ENST00000570475 ARF6P62330 175 aa12.33□□□□□ -0.44
USP43-202ENST00000570475 FA2HQ7L5A8 372 aa12.33□□□□□ -0.44
USP43-202ENST00000570475 ZNF596Q8TC21 504 aa12.33□□□□□ -0.44
USP43-202ENST00000570475 NOTCH3Q9UM47 2321 aa12.33□□□□□ -0.44
USP43-202ENST00000570475 CT45A10P0DMU9 189 aa12.33□□□□□ -0.44
USP43-202ENST00000570475 TSPOP30536 169 aa12.33□□□□□ -0.44
USP43-202ENST00000570475 LINC01560Q8TB33 94 aa12.33□□□□□ -0.44
USP43-202ENST00000570475 TNRC6BQ9UPQ9 1833 aaKnown RBP12.33□□□□□ -0.44
USP43-202ENST00000570475 PTPRQQ9UMZ3 2332 aa12.32□□□□□ -0.44
USP43-202ENST00000570475 IGLV3-9A0A075B6K5 115 aa12.32□□□□□ -0.44
USP43-202ENST00000570475 PSG1P11464 419 aa12.32□□□□□ -0.44
USP43-202ENST00000570475 FXYD5Q96DB9 178 aa12.32□□□□□ -0.44
USP43-202ENST00000570475 NCOR2Q9Y618 2525 aa12.32□□□□□ -0.44
USP43-202ENST00000570475 M0R3E3 92 aa12.32□□□□□ -0.44
USP43-202ENST00000570475 PNKDQ8N490 385 aa12.32□□□□□ -0.44
USP43-202ENST00000570475 CBY1Q9Y3M2 126 aa12.32□□□□□ -0.44
USP43-202ENST00000570475 IGHV3OR16-13A0A075B7E8 117 aa12.32□□□□□ -0.44
USP43-202ENST00000570475 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.32□□□□□ -0.44
USP43-202ENST00000570475 IGHV3-74A0A0B4J1X5 117 aa12.32□□□□□ -0.44
USP43-202ENST00000570475 LINC00322Q6ZN03 302 aaPredicted RBP12.32□□□□□ -0.44
USP43-202ENST00000570475 ZNF738Q8NE65 137 aa12.32□□□□□ -0.44
USP43-202ENST00000570475 STXBP6Q8NFX7 210 aa12.32□□□□□ -0.44
USP43-202ENST00000570475 IGF2BP2-AS1Q96M15 143 aa12.32□□□□□ -0.44
USP43-202ENST00000570475 RBM14Q96PK6 669 aaKnown RBP12.32□□□□□ -0.44
USP43-202ENST00000570475 TRAV9-2A0A087WT02 112 aa12.31□□□□□ -0.44
USP43-202ENST00000570475 MPV17L2Q567V2 206 aa12.31□□□□□ -0.44
USP43-202ENST00000570475 OR4F17Q8NGA8 305 aa12.31□□□□□ -0.44
USP43-202ENST00000570475 TMEM167AQ8TBQ9 72 aa12.31□□□□□ -0.44
USP43-202ENST00000570475 ABHD17AQ96GS6 310 aa12.31□□□□□ -0.44
USP43-202ENST00000570475 A0A0G2JNJ9 132 aa12.31□□□□□ -0.44
USP43-202ENST00000570475 C22orf46C9J442 243 aa12.31□□□□□ -0.44
USP43-202ENST00000570475 IL4P05112 153 aa12.31□□□□□ -0.44
USP43-202ENST00000570475 OR5AL1P0C617 328 aa12.31□□□□□ -0.44
USP43-202ENST00000570475 COMPP49747 757 aaPredicted RBP12.31□□□□□ -0.44
USP43-202ENST00000570475 AARDQ4LEZ3 155 aa12.31□□□□□ -0.44
USP43-202ENST00000570475 C5orf17Q8NAS9 161 aa12.31□□□□□ -0.44
USP43-202ENST00000570475 AP1S3Q96PC3 154 aa12.31□□□□□ -0.44
USP43-202ENST00000570475 ALKBH7Q9BT30 221 aaPredicted RBP12.31□□□□□ -0.44
USP43-202ENST00000570475 Q9UFV3 132 aa12.31□□□□□ -0.44
USP43-202ENST00000570475 TMEM178BH3BS89 294 aa12.31□□□□□ -0.44
USP43-202ENST00000570475 IGFL4Q6B9Z1 124 aa12.31□□□□□ -0.44
USP43-202ENST00000570475 TMEM116Q8NCL8 245 aa12.31□□□□□ -0.44
USP43-202ENST00000570475 OR5AN1Q8NGI8 311 aa12.31□□□□□ -0.44
USP43-202ENST00000570475 C17orf77Q96MU5 243 aa12.31□□□□□ -0.44
USP43-202ENST00000570475 MAP1LC3CQ9BXW4 147 aa12.31□□□□□ -0.44
USP43-202ENST00000570475 CHODLQ9H9P2 273 aa12.31□□□□□ -0.44
USP43-202ENST00000570475 MAP1AP78559 2803 aaPredicted RBP12.3□□□□□ -0.44
USP43-202ENST00000570475 PAX1P15863 534 aa12.3□□□□□ -0.44
USP43-202ENST00000570475 MC5RP33032 325 aa12.3□□□□□ -0.44
USP43-202ENST00000570475 NHLH1Q02575 133 aa12.3□□□□□ -0.44
USP43-202ENST00000570475 TMEM191AQ9H0A3 160 aa12.3□□□□□ -0.44
USP43-202ENST00000570475 ZFP30Q9Y2G7 519 aa12.3□□□□□ -0.44
USP43-202ENST00000570475 CTSZQ9UBR2 303 aa12.3□□□□□ -0.44
USP43-202ENST00000570475 IGHV1-69-2A0A0G2JMI3 117 aa12.29□□□□□ -0.44
USP43-202ENST00000570475 GNG7O60262 68 aa12.29□□□□□ -0.44
USP43-202ENST00000570475 ZNF833PQ6ZTB9 187 aa12.29□□□□□ -0.44
USP43-202ENST00000570475 K7EQM0 130 aa12.29□□□□□ -0.44
USP43-202ENST00000570475 TCRAP04437 139 aa12.29□□□□□ -0.44
USP43-202ENST00000570475 POU2AF1Q16633 256 aa12.29□□□□□ -0.44
USP43-202ENST00000570475 PRR30Q53SZ7 412 aaPredicted RBP12.29□□□□□ -0.44
USP43-202ENST00000570475 Q71RC1 249 aaPredicted RBP12.29□□□□□ -0.44
USP43-202ENST00000570475 NAA38Q9BRA0 125 aaKnown RBP12.29□□□□□ -0.44
USP43-202ENST00000570475 VPS25Q9BRG1 176 aa12.29□□□□□ -0.44
USP43-202ENST00000570475 NGBQ9NPG2 151 aa12.29□□□□□ -0.44
USP43-202ENST00000570475 APOHP02749 345 aaPredicted RBP12.29□□□□□ -0.44
USP43-202ENST00000570475 CR1LQ2VPA4 569 aa12.29□□□□□ -0.44
USP43-202ENST00000570475 PPP1R27Q86WC6 154 aa12.29□□□□□ -0.44
USP43-202ENST00000570475 RNASE6Q93091 150 aaKnown RBP12.29□□□□□ -0.44
USP43-202ENST00000570475 LINC00614P0C842 121 aa12.28□□□□□ -0.44
USP43-202ENST00000570475 IGHV1-8P0DP01 117 aa12.28□□□□□ -0.44
USP43-202ENST00000570475 GATA4P43694 442 aa12.28□□□□□ -0.44
USP43-202ENST00000570475 MEF2CQ06413 473 aaPredicted RBP12.28□□□□□ -0.44
USP43-202ENST00000570475 ZC2HC1AQ96GY0 325 aa12.28□□□□□ -0.44
USP43-202ENST00000570475 TMUB1Q9BVT8 246 aa12.28□□□□□ -0.44
USP43-202ENST00000570475 CGB1A6NKQ9 187 aa12.28□□□□□ -0.44
USP43-202ENST00000570475 AKAP13Q12802 2813 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms