RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 OR8G2PQ6IF36 304 aa7.08□□□□□ -1.28
CTDNEP1-202ENST00000570380 LPCAT3Q6P1A2 487 aa7.08□□□□□ -1.28
CTDNEP1-202ENST00000570380 GPR141Q7Z602 305 aa7.08□□□□□ -1.28
CTDNEP1-202ENST00000570380 NFE4Q86UQ8 179 aa7.08□□□□□ -1.28
CTDNEP1-202ENST00000570380 LYSMD2Q8IV50 215 aa7.08□□□□□ -1.28
CTDNEP1-202ENST00000570380 LINC00612Q8N6U2 182 aa7.08□□□□□ -1.28
CTDNEP1-202ENST00000570380 OR10J6PQ8NGY7 276 aa7.08□□□□□ -1.28
CTDNEP1-202ENST00000570380 RNASEH2CQ8TDP1 164 aaKnown RBP7.08□□□□□ -1.28
CTDNEP1-202ENST00000570380 TMEM170AQ8WVE7 144 aa7.08□□□□□ -1.28
CTDNEP1-202ENST00000570380 ACY3Q96HD9 319 aa7.08□□□□□ -1.28
CTDNEP1-202ENST00000570380 C16orf92Q96LL3 132 aa7.08□□□□□ -1.28
CTDNEP1-202ENST00000570380 DIABLOQ9NR28 239 aa7.08□□□□□ -1.28
CTDNEP1-202ENST00000570380 TXNL4BQ9NX01 149 aaKnown RBP7.08□□□□□ -1.28
CTDNEP1-202ENST00000570380 DUSP14O95147 198 aaKnown RBP7.07□□□□□ -1.28
CTDNEP1-202ENST00000570380 UCP1P25874 307 aa7.07□□□□□ -1.28
CTDNEP1-202ENST00000570380 AKR1C2P52895 323 aa7.07□□□□□ -1.28
CTDNEP1-202ENST00000570380 SCAND1P57086 179 aa7.07□□□□□ -1.28
CTDNEP1-202ENST00000570380 NEDD8Q15843 81 aa7.07□□□□□ -1.28
CTDNEP1-202ENST00000570380 C1orf194Q5T5A4 169 aa7.07□□□□□ -1.28
CTDNEP1-202ENST00000570380 TMEM144Q7Z5S9 345 aa7.07□□□□□ -1.28
CTDNEP1-202ENST00000570380 LINC00528Q8N1L1 170 aa7.07□□□□□ -1.28
CTDNEP1-202ENST00000570380 RNASE8Q8TDE3 154 aaKnown RBP7.07□□□□□ -1.28
CTDNEP1-202ENST00000570380 VSIG2Q96IQ7 327 aa7.07□□□□□ -1.28
CTDNEP1-202ENST00000570380 PFDN2Q9UHV9 154 aa7.07□□□□□ -1.28
CTDNEP1-202ENST00000570380 IGLV5-52A0A0A0MRZ9 124 aa7.06□□□□□ -1.28
CTDNEP1-202ENST00000570380 NXPH4O95158 308 aa7.06□□□□□ -1.28
CTDNEP1-202ENST00000570380 OXTP01178 125 aa7.06□□□□□ -1.28
CTDNEP1-202ENST00000570380 CLEC2LP0C7M8 214 aa7.06□□□□□ -1.28
CTDNEP1-202ENST00000570380 HRH1P35367 487 aa7.06□□□□□ -1.28
CTDNEP1-202ENST00000570380 SPCS3P61009 180 aa7.06□□□□□ -1.28
CTDNEP1-202ENST00000570380 IGFL4Q6B9Z1 124 aa7.06□□□□□ -1.28
CTDNEP1-202ENST00000570380 ZNF493Q6ZR52 646 aa7.06□□□□□ -1.28
CTDNEP1-202ENST00000570380 OR8I2Q8N0Y5 310 aa7.06□□□□□ -1.28
CTDNEP1-202ENST00000570380 TMEM256Q8N2U0 113 aa7.06□□□□□ -1.28
CTDNEP1-202ENST00000570380 SLC24A4Q8NFF2 622 aa7.06□□□□□ -1.28
CTDNEP1-202ENST00000570380 TP53RKQ96S44 253 aa7.06□□□□□ -1.28
CTDNEP1-202ENST00000570380 SLC25A39Q9BZJ4 359 aaPredicted RBP7.06□□□□□ -1.28
CTDNEP1-202ENST00000570380 HEYLQ9NQ87 328 aaPredicted RBP7.06□□□□□ -1.28
CTDNEP1-202ENST00000570380 GAGE12BA1L429 117 aa7.05□□□□□ -1.28
CTDNEP1-202ENST00000570380 BOLA2-SMG1P6H3BVE0 249 aa7.05□□□□□ -1.28
CTDNEP1-202ENST00000570380 GAGE7O76087 117 aa7.05□□□□□ -1.28
CTDNEP1-202ENST00000570380 GAGE12FP0CL80 117 aa7.05□□□□□ -1.28
CTDNEP1-202ENST00000570380 GAGE12GP0CL81 117 aa7.05□□□□□ -1.28
CTDNEP1-202ENST00000570380 GAGE12IP0CL82 117 aa7.05□□□□□ -1.28
CTDNEP1-202ENST00000570380 HLA-DMAP28067 261 aa7.05□□□□□ -1.28
CTDNEP1-202ENST00000570380 SDC2P34741 201 aa7.05□□□□□ -1.28
CTDNEP1-202ENST00000570380 MEOX2P50222 304 aa7.05□□□□□ -1.28
CTDNEP1-202ENST00000570380 UCP3P55916 312 aa7.05□□□□□ -1.28
CTDNEP1-202ENST00000570380 TSPAN5P62079 268 aa7.05□□□□□ -1.28
CTDNEP1-202ENST00000570380 ZNF90Q03938 601 aa7.05□□□□□ -1.28
CTDNEP1-202ENST00000570380 MXD1Q05195 221 aa7.05□□□□□ -1.28
CTDNEP1-202ENST00000570380 IDNKQ5T6J7 187 aa7.05□□□□□ -1.28
CTDNEP1-202ENST00000570380 SAMD13Q5VXD3 122 aa7.05□□□□□ -1.28
CTDNEP1-202ENST00000570380 ETFRF1Q6IPR1 90 aa7.05□□□□□ -1.28
CTDNEP1-202ENST00000570380 TMED4Q7Z7H5 227 aa7.05□□□□□ -1.28
CTDNEP1-202ENST00000570380 TMEM263Q8WUH6 116 aaKnown RBP7.05□□□□□ -1.28
CTDNEP1-202ENST00000570380 PKHD1L1Q86WI1 4243 aa7.05□□□□□ -1.28
CTDNEP1-202ENST00000570380 LRP2P98164 4655 aa7.04□□□□□ -1.28
CTDNEP1-202ENST00000570380 ADAP1O75689 374 aa7.04□□□□□ -1.28
CTDNEP1-202ENST00000570380 TNFAIP8O95379 198 aa7.04□□□□□ -1.28
CTDNEP1-202ENST00000570380 SMIM18P0DKX4 95 aa7.04□□□□□ -1.28
CTDNEP1-202ENST00000570380 LYZP61626 148 aa7.04□□□□□ -1.28
CTDNEP1-202ENST00000570380 AARDQ4LEZ3 155 aa7.04□□□□□ -1.28
CTDNEP1-202ENST00000570380 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.04□□□□□ -1.28
CTDNEP1-202ENST00000570380 RNF182Q8N6D2 247 aa7.04□□□□□ -1.28
CTDNEP1-202ENST00000570380 OR52E5Q8NH55 327 aa7.04□□□□□ -1.28
CTDNEP1-202ENST00000570380 RSG1Q9BU20 258 aa7.04□□□□□ -1.28
CTDNEP1-202ENST00000570380 IGKV1D-37A0A075B6S9 117 aa7.03□□□□□ -1.28
CTDNEP1-202ENST00000570380 TRAV8-2A0A0B4J237 113 aa7.03□□□□□ -1.28
CTDNEP1-202ENST00000570380 ZNF98A6NK75 572 aa7.03□□□□□ -1.28
CTDNEP1-202ENST00000570380 ATG12O94817 140 aa7.03□□□□□ -1.28
CTDNEP1-202ENST00000570380 ZNF182P17025 639 aaPredicted RBP7.03□□□□□ -1.28
CTDNEP1-202ENST00000570380 PI3P19957 117 aa7.03□□□□□ -1.28
CTDNEP1-202ENST00000570380 RND3P61587 244 aa7.03□□□□□ -1.28
CTDNEP1-202ENST00000570380 KLF9Q13886 244 aaPredicted RBP7.03□□□□□ -1.28
CTDNEP1-202ENST00000570380 SP6Q3SY56 376 aa7.03□□□□□ -1.28
CTDNEP1-202ENST00000570380 PPP1R14BQ96C90 147 aa7.03□□□□□ -1.28
CTDNEP1-202ENST00000570380 RRNAD1Q96FB5 475 aaKnown RBP7.03□□□□□ -1.28
CTDNEP1-202ENST00000570380 SLC25A32Q9H2D1 315 aa7.03□□□□□ -1.28
CTDNEP1-202ENST00000570380 TMPRSS5Q9H3S3 457 aa7.03□□□□□ -1.28
CTDNEP1-202ENST00000570380 MSRB1Q9NZV6 116 aa7.03□□□□□ -1.28
CTDNEP1-202ENST00000570380 A0A087WXM4 84 aa7.02□□□□□ -1.29
CTDNEP1-202ENST00000570380 LOC100506127A0A0U1RQW1 187 aa7.02□□□□□ -1.29
CTDNEP1-202ENST00000570380 C3orf85A0A1B0GTC6 90 aa7.02□□□□□ -1.29
CTDNEP1-202ENST00000570380 LRCOL1A6NCL2 159 aa7.02□□□□□ -1.29
CTDNEP1-202ENST00000570380 ZFP92A6NM28 416 aa7.02□□□□□ -1.29
CTDNEP1-202ENST00000570380 NPIPB6E9PJ23 425 aa7.02□□□□□ -1.29
CTDNEP1-202ENST00000570380 RLN2P04090 185 aa7.02□□□□□ -1.29
CTDNEP1-202ENST00000570380 PGAM2P15259 253 aa7.02□□□□□ -1.29
CTDNEP1-202ENST00000570380 TGFBR1P36897 503 aa7.02□□□□□ -1.29
CTDNEP1-202ENST00000570380 GALR1P47211 349 aa7.02□□□□□ -1.29
CTDNEP1-202ENST00000570380 PIGPP57054 158 aa7.02□□□□□ -1.29
CTDNEP1-202ENST00000570380 KRTAP10-4P60372 401 aaPredicted RBP7.02□□□□□ -1.29
CTDNEP1-202ENST00000570380 OR2F1Q13607 317 aa7.02□□□□□ -1.29
CTDNEP1-202ENST00000570380 TRIM16LQ309B1 348 aa7.02□□□□□ -1.29
CTDNEP1-202ENST00000570380 ARRDC1Q8N5I2 433 aa7.02□□□□□ -1.29
CTDNEP1-202ENST00000570380 NTN5Q8WTR8 489 aaPredicted RBP7.02□□□□□ -1.29
CTDNEP1-202ENST00000570380 YIPF6Q96EC8 236 aa7.02□□□□□ -1.29
CTDNEP1-202ENST00000570380 S100A16Q96FQ6 103 aaKnown RBP7.02□□□□□ -1.29
CTDNEP1-202ENST00000570380 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms