RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 RBFOX2O43251 390 aaKnown RBP eCLIP4.13□□□□□ -1.75
UBFD1-209ENST00000569919 GNG7O60262 68 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 WBP4O75554 376 aaKnown RBP4.13□□□□□ -1.75
UBFD1-209ENST00000569919 ZNF688P0C7X2 276 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 ZNF705DP0CH99 300 aaPredicted RBP4.13□□□□□ -1.75
UBFD1-209ENST00000569919 ZNF705BP0CI00 300 aaPredicted RBP4.13□□□□□ -1.75
UBFD1-209ENST00000569919 NQO2P16083 231 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 NFYAP23511 347 aaPredicted RBP4.13□□□□□ -1.75
UBFD1-209ENST00000569919 ID1P41134 155 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 EIF2B2P49770 351 aaKnown RBP4.13□□□□□ -1.75
UBFD1-209ENST00000569919 WT1-ASQ06250 92 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 ST3GAL4Q11206 333 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 EIF4EBP1Q13541 118 aaPredicted RBP4.13□□□□□ -1.75
UBFD1-209ENST00000569919 ARL6IP1Q15041 203 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 RAB11BQ15907 218 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 POU2AF1Q16633 256 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 KCTD21Q4G0X4 260 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 HSD17B12Q53GQ0 312 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 FAM222AQ5U5X8 452 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 C1orf146Q5VVC0 180 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 TOMM20LQ6UXN7 152 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 ZNF705AQ6ZN79 300 aaPredicted RBP4.13□□□□□ -1.75
UBFD1-209ENST00000569919 SPAG16Q8N0X2 631 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 CBR4Q8N4T8 237 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 Q8NBF4 154 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 STXBP6Q8NFX7 210 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 OR10R2Q8NGX6 335 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 MAFIPQ8WZ33 124 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 LSM10Q969L4 123 aaKnown RBP4.13□□□□□ -1.75
UBFD1-209ENST00000569919 SLC25A46Q96AG3 418 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 FAM3DQ96BQ1 224 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 TMEM56Q96MV1 263 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 DCSTAMPQ9H295 470 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 RFNGQ9Y644 331 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 DYNC1H1Q14204 4646 aaKnown RBP4.13□□□□□ -1.75
UBFD1-209ENST00000569919 DNAH11Q96DT5 4516 aa4.13□□□□□ -1.75
UBFD1-209ENST00000569919 IGKV1D-8A0A087WSZ0 117 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 IGHV3-66A0A0C4DH42 116 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 A0A0U1RRA0 63 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 NDUFAF8A1L188 74 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 SOCS3O14543 225 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 IFNA5P01569 189 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 UCHL1P09936 223 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 DTYMKP23919 212 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 AP2S1P53680 142 aaPredicted RBP4.12□□□□□ -1.75
UBFD1-209ENST00000569919 WNT4P56705 351 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 SSTP61278 116 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 DAD1P61803 113 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 CATR1Q13166 79 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 GAMTQ14353 236 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 INSL4Q14641 139 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 MSMO1Q15800 293 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 C14orf177Q52M58 125 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 TTC32Q5I0X7 151 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 CNIH2Q6PI25 160 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 ZNF600Q6ZNG1 722 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 Q6ZRG5 221 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 ZNF555Q8NEP9 628 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 OR1P1Q8NH06 330 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 NARS2Q96I59 477 aaKnown RBP4.12□□□□□ -1.75
UBFD1-209ENST00000569919 C9orf16Q9BUW7 83 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 HINT2Q9BX68 163 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 NDUFA4L2Q9NRX3 87 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 FKBP11Q9NYL4 201 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 TAS2R8Q9NYW2 309 aa4.12□□□□□ -1.75
UBFD1-209ENST00000569919 SRRM2Q9UQ35 2752 aaKnown RBP4.11□□□□□ -1.75
UBFD1-209ENST00000569919 A0A075B6Q4 140 aa4.11□□□□□ -1.75
UBFD1-209ENST00000569919 IGHV3OR16-12A0A075B7B8 117 aa4.11□□□□□ -1.75
UBFD1-209ENST00000569919 IGKV1D-13A0A0B4J2D9 117 aa4.11□□□□□ -1.75
UBFD1-209ENST00000569919 METTL21EPA6NDL7 271 aa4.11□□□□□ -1.75
UBFD1-209ENST00000569919 H3BMM0 161 aa4.11□□□□□ -1.75
UBFD1-209ENST00000569919 H7C423 109 aa4.11□□□□□ -1.75
UBFD1-209ENST00000569919 I3L2K1 104 aa4.11□□□□□ -1.75
UBFD1-209ENST00000569919 MYL12BO14950 172 aa4.11□□□□□ -1.75
UBFD1-209ENST00000569919 ATP8B1O43520 1251 aa4.11□□□□□ -1.75
UBFD1-209ENST00000569919 SNAPC5O75971 98 aa4.11□□□□□ -1.75
UBFD1-209ENST00000569919 IGKV1-13P0DP09 117 aa4.11□□□□□ -1.75
UBFD1-209ENST00000569919 HIST1H1DP16402 221 aaKnown RBP4.11□□□□□ -1.75
UBFD1-209ENST00000569919 ALDH3B2P48448 385 aa4.11□□□□□ -1.75
UBFD1-209ENST00000569919 ARPC4P59998 168 aa4.11□□□□□ -1.75
UBFD1-209ENST00000569919 SNRPD3P62318 126 aaKnown RBP4.11□□□□□ -1.75
UBFD1-209ENST00000569919 DHRS2Q13268 280 aa4.11□□□□□ -1.75
UBFD1-209ENST00000569919 OGFRL1Q5TC84 451 aaPredicted RBP4.11□□□□□ -1.75
UBFD1-209ENST00000569919 TPRA1Q86W33 373 aa4.11□□□□□ -1.75
UBFD1-209ENST00000569919 DCANP1Q8TF63 244 aa4.11□□□□□ -1.75
UBFD1-209ENST00000569919 PCNPQ8WW12 178 aaKnown RBP4.11□□□□□ -1.75
UBFD1-209ENST00000569919 AK6Q9Y3D8 172 aaKnown RBP4.11□□□□□ -1.75
UBFD1-209ENST00000569919 HELTA6NFD8 242 aa4.1□□□□□ -1.75
UBFD1-209ENST00000569919 SULT1C2O00338 296 aa4.1□□□□□ -1.75
UBFD1-209ENST00000569919 MFNGO00587 321 aa4.1□□□□□ -1.75
UBFD1-209ENST00000569919 ARL6IP5O75915 188 aa4.1□□□□□ -1.75
UBFD1-209ENST00000569919 TMEM50AO95807 157 aa4.1□□□□□ -1.75
UBFD1-209ENST00000569919 MT-CO2P00403 227 aa4.1□□□□□ -1.75
UBFD1-209ENST00000569919 HBE1P02100 147 aa4.1□□□□□ -1.75
UBFD1-209ENST00000569919 SMR3BP02814 79 aaPredicted RBP4.1□□□□□ -1.75
UBFD1-209ENST00000569919 CRYBB3P26998 211 aa4.1□□□□□ -1.75
UBFD1-209ENST00000569919 P2RY1P47900 373 aa4.1□□□□□ -1.75
UBFD1-209ENST00000569919 CLDN12P56749 244 aa4.1□□□□□ -1.75
UBFD1-209ENST00000569919 CLINT1Q14677 625 aa4.1□□□□□ -1.75
UBFD1-209ENST00000569919 USF2Q15853 346 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms