RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 C5orf56Q8N8D9 126 aa4.78□□□□□ -1.64
CYLD-216ENST00000569891 BORCS7Q96B45 105 aa4.78□□□□□ -1.64
CYLD-216ENST00000569891 H3BUX3 64 aa4.77□□□□□ -1.65
CYLD-216ENST00000569891 RPS10P46783 165 aaKnown RBP4.77□□□□□ -1.65
CYLD-216ENST00000569891 OR8I2Q8N0Y5 310 aa4.77□□□□□ -1.65
CYLD-216ENST00000569891 SLC50A1Q9BRV3 221 aa4.77□□□□□ -1.65
CYLD-216ENST00000569891 SHANK2-AS3Q9BTD1 123 aa4.77□□□□□ -1.65
CYLD-216ENST00000569891 TMPRSS5Q9H3S3 457 aa4.77□□□□□ -1.65
CYLD-216ENST00000569891 M0QZ24 198 aa4.77□□□□□ -1.65
CYLD-216ENST00000569891 TRGV3P03979 118 aa4.77□□□□□ -1.65
CYLD-216ENST00000569891 WDR73Q6P4I2 378 aa4.77□□□□□ -1.65
CYLD-216ENST00000569891 TMEM88Q6PEY1 159 aa4.77□□□□□ -1.65
CYLD-216ENST00000569891 BBC3Q96PG8 261 aaPredicted RBP4.77□□□□□ -1.65
CYLD-216ENST00000569891 SLC25A39Q9BZJ4 359 aaPredicted RBP4.77□□□□□ -1.65
CYLD-216ENST00000569891 CDC42EP3Q9UKI2 254 aa4.77□□□□□ -1.65
CYLD-216ENST00000569891 ZNF253O75346 499 aa4.77□□□□□ -1.65
CYLD-216ENST00000569891 RAB5AP20339 215 aa4.77□□□□□ -1.65
CYLD-216ENST00000569891 FAM3BP58499 235 aaPredicted RBP4.77□□□□□ -1.65
CYLD-216ENST00000569891 FAM106AQ4KMX7 169 aa4.77□□□□□ -1.65
CYLD-216ENST00000569891 RITA1Q96K30 269 aa4.77□□□□□ -1.65
CYLD-216ENST00000569891 JMJD8Q96S16 334 aa4.77□□□□□ -1.65
CYLD-216ENST00000569891 ATG101Q9BSB4 218 aa4.77□□□□□ -1.65
CYLD-216ENST00000569891 SCRT1Q9BWW7 348 aa4.77□□□□□ -1.65
CYLD-216ENST00000569891 A6NDX4 124 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 CGB1A6NKQ9 187 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 K7EIM0 57 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 PEX7O00628 323 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 APELAP0DMC3 54 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 NPPCP23582 126 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 ERVFC1-1P60608 527 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 RPEL1Q2QD12 228 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 GCSAMLQ5JQS6 135 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 FAM210BQ96KR6 192 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 RFNGQ9Y644 331 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 NBASA2RRP1 2371 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 TRBV9A0A0B4J1U6 114 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 A0A0U1RQK1 487 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 ZNF785A8K8V0 405 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 ATP6V0E1O15342 81 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 IGF1P05019 195 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 PLA2G2AP14555 144 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 RPL23P62829 140 aaKnown RBP4.76□□□□□ -1.65
CYLD-216ENST00000569891 KLK9Q2XQG4 91 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 C15orf32Q32M92 178 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 C9orf139Q6ZV77 190 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 OSTCQ9NRP0 149 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 KLK9Q9UKQ9 250 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 H3BRN7 92 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 IGHG2P01859 326 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 MT-ND6P03923 174 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 CRYBA1P05813 215 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 MGST1P10620 155 aaKnown RBP4.76□□□□□ -1.65
CYLD-216ENST00000569891 ATP5G3P48201 142 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 TPPP2P59282 170 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 ZNF90Q03938 601 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 PRB3Q04118 309 aaPredicted RBP4.76□□□□□ -1.65
CYLD-216ENST00000569891 BAGE2Q86Y30 109 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 CBLN2Q8IUK8 224 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 FAM103A1Q9BTL3 118 aaKnown RBP4.76□□□□□ -1.65
CYLD-216ENST00000569891 CHD8Q9HCK8 2581 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 TRBV24-1A0A075B6N3 115 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 PGPA6NDG6 321 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 RNF223E7ERA6 249 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 CD24P25063 80 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 SAPCD1Q5SSQ6 148 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 FAM162BQ5T6X4 162 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 C1QL4Q86Z23 238 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 SFRP2Q96HF1 295 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 EPDR1Q9UM22 224 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 ZFP30Q9Y2G7 519 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 SOX21Q9Y651 276 aaPredicted RBP4.76□□□□□ -1.65
CYLD-216ENST00000569891 PKHD1L1Q86WI1 4243 aa4.76□□□□□ -1.65
CYLD-216ENST00000569891 ACACBO00763 2458 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 RYR2Q92736 4967 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 C9JQL5 133 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 E7EUB6 86 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 GATCO43716 136 aaKnown RBP4.75□□□□□ -1.65
CYLD-216ENST00000569891 OR10J4P0C629 311 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 PF4V1P10720 104 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 RPL35P42766 123 aaKnown RBP4.75□□□□□ -1.65
CYLD-216ENST00000569891 DLX1P56177 255 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 OR4B1Q8NGF8 309 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 BLNKQ8WV28 456 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 TMEM37Q8WXS4 190 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 Q96MF0 132 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 SLC25A2Q9BXI2 301 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 WI2-2373I1.2A0A1W2PRP0 233 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 GATA2P23769 480 aaPredicted RBP4.75□□□□□ -1.65
CYLD-216ENST00000569891 CRYBB3P26998 211 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 RANP62826 216 aaKnown RBP4.75□□□□□ -1.65
CYLD-216ENST00000569891 LY6EQ16553 131 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 RUSC1-AS1Q66K80 236 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 BRD3OSQ6XYD6 125 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 SSX7Q7RTT5 188 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 FAM24BQ8N5W8 94 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 SERTAD4Q9NUC0 356 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 MRPL27Q9P0M9 148 aaKnown RBP4.75□□□□□ -1.65
CYLD-216ENST00000569891 VPREB3Q9UKI3 123 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 DNAH5Q8TE73 4624 aa4.75□□□□□ -1.65
CYLD-216ENST00000569891 IGKV1OR2-108A0A075B7D4 117 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms