RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 TRGC2P03986 189 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 TRGC1P0CF51 173 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 IGLC6P0CF74 106 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 JPT2Q9H910 190 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 DPM3Q9P2X0 92 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 VAX2Q9UIW0 290 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 ABCA12Q86UK0 2595 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 F5H5P2 479 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 C19orf84I3L1E1 186 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 HLA-DPB1P04440 258 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 CRYGDP07320 174 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 FAUP35544 74 aaKnown RBP5.37□□□□□ -1.55
SMG1-217ENST00000569764 LINC00596Q86U02 117 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 ZNRF2Q8NHG8 242 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 VSTM2AQ8TAG5 236 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 PRR13Q9NZ81 148 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 PIEZO2Q9H5I5 2752 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 LRBAP50851 2863 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 TRAV40A0A0B4J280 105 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 C7orf66A4D0T2 115 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 B4DEV8 164 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 JTBO76095 146 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 HKR1P10072 659 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 C19orf54Q5BKX5 351 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 OR5AK2Q8NH90 309 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 BRK1Q8WUW1 75 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 PTPRBP23467 1997 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 C15orf65H3BRN8 121 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 M0R1X1 148 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 SRSF10O75494 262 aaKnown RBP5.37□□□□□ -1.55
SMG1-217ENST00000569764 WISP2O76076 250 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 ADCYAP1P18509 176 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 GPM6AP51674 278 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 HOXA4Q00056 320 aaPredicted RBP5.37□□□□□ -1.55
SMG1-217ENST00000569764 MORN2Q502X0 79 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 C10orf126Q8N4M7 172 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 ZNF114Q8NC26 417 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 OR51G1Q8NGK1 321 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 ZNF837Q96EG3 531 aaPredicted RBP5.37□□□□□ -1.55
SMG1-217ENST00000569764 TM2D1Q9BX74 207 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 PARP11Q9NR21 331 aa5.37□□□□□ -1.55
SMG1-217ENST00000569764 HMSDA8MTL9 139 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 IGKV3-15P01624 115 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 CD55P08174 381 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 SP6Q3SY56 376 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 Q8N1Y9 231 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 OR1L1Q8NH94 360 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 PBOV1Q9GZY1 135 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 PRR14LQ5THK1 2151 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 ASH1LQ9NR48 2969 aaKnown RBP5.36□□□□□ -1.55
SMG1-217ENST00000569764 LOXP28300 417 aaPredicted RBP5.36□□□□□ -1.55
SMG1-217ENST00000569764 ECSCRQ19T08 205 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 WDR38Q5JTN6 314 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 TEPPQ6URK8 271 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 BORCS7Q96B45 105 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 CARD19Q96LW7 228 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 C18orf15Q96N68 181 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 PLA2G2DQ9UNK4 145 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 SELENOKQ9Y6D0 94 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 MYO9AB2RTY4 2548 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 FAM236AA0A1B0GUQ0 79 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 FAM236BA0A1B0GV22 79 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 FNDC10F2Z333 226 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 ZNHIT1O43257 154 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 GSTZ1O43708 216 aaPredicted RBP5.36□□□□□ -1.55
SMG1-217ENST00000569764 GNB3P16520 340 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 BTCP35070 178 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 FGF12P61328 243 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 TMEM255AQ5JRV8 349 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 SAXO1Q8IYX7 474 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 TOMM5Q8N4H5 51 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 OR4B1Q8NGF8 309 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 OR2T10Q8NGZ9 312 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 OR9G1Q8NH87 305 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 OTOSQ8NHW6 89 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 SLC25A38Q96DW6 304 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 CSPG4Q6UVK1 2322 aa5.36□□□□□ -1.55
SMG1-217ENST00000569764 TNRC6AQ8NDV7 1962 aaKnown RBP5.35□□□□□ -1.55
SMG1-217ENST00000569764 IGHV4-30-2A0A087WSY4 118 aa5.35□□□□□ -1.55
SMG1-217ENST00000569764 MSGN1A6NI15 193 aa5.35□□□□□ -1.55
SMG1-217ENST00000569764 HIST1H1DP16402 221 aaKnown RBP5.35□□□□□ -1.55
SMG1-217ENST00000569764 RNASE12Q5GAN4 147 aaKnown RBP5.35□□□□□ -1.55
SMG1-217ENST00000569764 TEX36Q5VZQ5 186 aa5.35□□□□□ -1.55
SMG1-217ENST00000569764 RPRMLQ8N4K4 120 aa5.35□□□□□ -1.55
SMG1-217ENST00000569764 ACY3Q96HD9 319 aa5.35□□□□□ -1.55
SMG1-217ENST00000569764 GNB1LQ9BYB4 327 aa5.35□□□□□ -1.55
SMG1-217ENST00000569764 EIF5A2Q9GZV4 153 aaKnown RBP5.35□□□□□ -1.55
SMG1-217ENST00000569764 CADP27708 2225 aa5.35□□□□□ -1.55
SMG1-217ENST00000569764 CRXO43186 299 aaPredicted RBP5.35□□□□□ -1.55
SMG1-217ENST00000569764 CGAP01215 116 aa5.35□□□□□ -1.55
SMG1-217ENST00000569764 CD8AP01732 235 aa5.35□□□□□ -1.55
SMG1-217ENST00000569764 ABCA11PQ4W5N1 156 aa5.35□□□□□ -1.55
SMG1-217ENST00000569764 SH3BGRL3Q9H299 93 aa5.35□□□□□ -1.55
SMG1-217ENST00000569764 TACC2O95359 2948 aa5.35□□□□□ -1.55
SMG1-217ENST00000569764 MUC21A0A0G2JKD1 596 aa5.35□□□□□ -1.55
SMG1-217ENST00000569764 A0A1B0GWB2 263 aa5.35□□□□□ -1.55
SMG1-217ENST00000569764 PGA4P0DJD7 388 aa5.35□□□□□ -1.55
SMG1-217ENST00000569764 ZNF728P0DKX0 622 aa5.35□□□□□ -1.55
SMG1-217ENST00000569764 ATP6V0CP27449 155 aa5.35□□□□□ -1.55
SMG1-217ENST00000569764 HEPN1Q6WQI6 88 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms