RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 TMEM263Q8WUH6 116 aaKnown RBP4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 BORCS5Q969J3 196 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 RAB3CQ96E17 227 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 S100A16Q96FQ6 103 aaKnown RBP4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 LINC00052Q96N35 136 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 GINS4Q9BRT9 223 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 TMPRSS5Q9H3S3 457 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 DIABLOQ9NR28 239 aa4.25□□□□□ -1.73
HERPUD1-217ENST00000569429 TRAV18A0A075B6X5 111 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 FOXI3A8MTJ6 420 aaPredicted RBP4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 TMEM14DPA8MWL7 114 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 C9JCJ5 164 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 F6UB75 175 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 RGS5O15539 181 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 RBFOX2O43251 390 aaKnown RBP eCLIP4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 RLN2P04090 185 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 HNRNPCP07910 306 aaKnown RBP eCLIP4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 NQO2P16083 231 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 ZNF182P17025 639 aaPredicted RBP4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 ID1P41134 155 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 PSMB3P49720 205 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 TMEM50BP56557 158 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 PRCDQ00LT1 54 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 ZNF846Q147U1 533 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 CDNFQ49AH0 187 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 WDR73Q6P4I2 378 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 NEGR1Q7Z3B1 354 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 SAMD12Q8N8I0 201 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 OR10R2Q8NGX6 335 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 AP3S1Q92572 193 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 TMEM230Q96A57 120 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 TMEM56Q96MV1 263 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 LINC01587Q99440 93 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 TM2D2Q9BX73 214 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 PECRQ9BY49 303 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 WDR12Q9GZL7 423 aaKnown RBP4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 LPAR5Q9H1C0 372 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 TMEM140Q9NV12 185 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 DOK5Q9P104 306 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 KLK11Q9UBX7 282 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 SPATA2Q9UM82 520 aa4.24□□□□□ -1.73
HERPUD1-217ENST00000569429 M0R2Z0 102 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 SOCS3O14543 225 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 LECT2O14960 151 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 PAX4O43316 350 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 BUB3O43684 328 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 ZNF324O75467 553 aaPredicted RBP4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 HPRT1P00492 218 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 HLA-DQB1P01920 261 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 UCP1P25874 307 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 TNFSF8P32971 234 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 GNG2P59768 71 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 QRFPP83859 136 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 ZNF415Q09FC8 603 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 ARL6IP1Q15041 203 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 MRPL23Q16540 153 aaKnown RBP4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 CTF1Q16619 201 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 SPINK13Q1W4C9 94 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 FAM89BQ8N5H3 189 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 OR11H7Q8NGC8 314 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 OR5H6Q8NGV6 325 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 COQ8AQ8NI60 647 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 LGALS14Q8TCE9 139 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 PINX1Q96BK5 328 aaKnown RBP4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 ARHGAP5-AS1Q96IT6 56 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 Q9HAA7 133 aa4.23□□□□□ -1.73
HERPUD1-217ENST00000569429 HPGDSO60760 199 aa4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 CLN5O75503 358 aa4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 SCGNO76038 276 aa4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 FCGR3AP08637 254 aa4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 HTN1P15515 57 aa4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 S100A5P33763 92 aa4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 SRSF3P84103 164 aaKnown RBP4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 SPCS2Q15005 226 aa4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 LINC01556Q5JQF7 62 aa4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 PLAC9Q5JTB6 97 aa4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 UBE2NLQ5JXB2 153 aa4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 FFAR4Q5NUL3 377 aa4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 LYSMD2Q8IV50 215 aa4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 BAP18Q8IXM2 172 aa4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 SPAG16Q8N0X2 631 aa4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 DMBX1Q8NFW5 382 aa4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 OR52E5Q8NH55 327 aa4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 DYNC2LI1Q8TCX1 351 aa4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 RHBDL2Q9NX52 303 aa4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 TAS2R8Q9NYW2 309 aa4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 CCDC59Q9P031 241 aaKnown RBP4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 VAX2Q9UIW0 290 aa4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 OR2W1Q9Y3N9 320 aa4.22□□□□□ -1.73
HERPUD1-217ENST00000569429 TRAV12-2A0A075B6T6 113 aa4.21□□□□□ -1.74
HERPUD1-217ENST00000569429 IGHV3-38A0A0C4DH36 116 aa4.21□□□□□ -1.74
HERPUD1-217ENST00000569429 RNF222A6NCQ9 220 aa4.21□□□□□ -1.74
HERPUD1-217ENST00000569429 MEIS3P1A6NDR6 274 aa4.21□□□□□ -1.74
HERPUD1-217ENST00000569429 ISLRO14498 428 aa4.21□□□□□ -1.74
HERPUD1-217ENST00000569429 CTDSP2O14595 271 aa4.21□□□□□ -1.74
HERPUD1-217ENST00000569429 GSTZ1O43708 216 aaPredicted RBP4.21□□□□□ -1.74
HERPUD1-217ENST00000569429 TMEM127O75204 238 aa4.21□□□□□ -1.74
HERPUD1-217ENST00000569429 CCNKO75909 580 aa4.21□□□□□ -1.74
HERPUD1-217ENST00000569429 IGKV1-17P01599 117 aa4.21□□□□□ -1.74
HERPUD1-217ENST00000569429 HIST1H1DP16402 221 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms