RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 SORL1Q92673 2214 aa7.09□□□□□ -1.27
UBR1-210ENST00000569337 KANTRA0A1W2PQU2 76 aa7.08□□□□□ -1.28
UBR1-210ENST00000569337 TMEM213A2RRL7 107 aa7.08□□□□□ -1.28
UBR1-210ENST00000569337 C2orf70A6NJV1 201 aa7.08□□□□□ -1.28
UBR1-210ENST00000569337 MPDU1O75352 247 aa7.08□□□□□ -1.28
UBR1-210ENST00000569337 IFNA5P01569 189 aa7.08□□□□□ -1.28
UBR1-210ENST00000569337 APOHP02749 345 aaPredicted RBP7.08□□□□□ -1.28
UBR1-210ENST00000569337 IL4P05112 153 aa7.08□□□□□ -1.28
UBR1-210ENST00000569337 FRMD6-AS1P0C7T7 363 aa7.08□□□□□ -1.28
UBR1-210ENST00000569337 ATP6V0CP27449 155 aa7.08□□□□□ -1.28
UBR1-210ENST00000569337 ZNF266Q14584 549 aa7.08□□□□□ -1.28
UBR1-210ENST00000569337 LCE2DQ5TA82 110 aaPredicted RBP7.08□□□□□ -1.28
UBR1-210ENST00000569337 SBSPONQ8IVN8 264 aa7.08□□□□□ -1.28
UBR1-210ENST00000569337 Q8N1Y9 231 aa7.08□□□□□ -1.28
UBR1-210ENST00000569337 SCGB1C1Q8TD33 95 aa7.08□□□□□ -1.28
UBR1-210ENST00000569337 Q8WTZ3 238 aa7.08□□□□□ -1.28
UBR1-210ENST00000569337 RNF125Q96EQ8 232 aa7.08□□□□□ -1.28
UBR1-210ENST00000569337 GINS3Q9BRX5 216 aa7.08□□□□□ -1.28
UBR1-210ENST00000569337 C20orf24Q9BUV8 137 aa7.08□□□□□ -1.28
UBR1-210ENST00000569337 PXMP4Q9Y6I8 212 aa7.08□□□□□ -1.28
UBR1-210ENST00000569337 U3KQK5 164 aa7.08□□□□□ -1.28
UBR1-210ENST00000569337 IGHV3OR16-13A0A075B7E8 117 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 IGHV3-49A0A0A0MS15 119 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 BORCS7-ASMTA0A0B4J1R7 106 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 IGHV3-74A0A0B4J1X5 117 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 IZUMO1RA6ND01 250 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 A8MWP6 167 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 JTBO76095 146 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 HNRNPCP07910 306 aaKnown RBP eCLIP7.07□□□□□ -1.28
UBR1-210ENST00000569337 IGHV4-30-4P0DP06 118 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 CBLN1P23435 193 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 RPL29P47914 159 aaKnown RBP7.07□□□□□ -1.28
UBR1-210ENST00000569337 PLP1P60201 277 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 LYZP61626 148 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 B2MP61769 119 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 SELENOTP62341 195 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 RAB31Q13636 194 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 DEFB114Q30KQ6 69 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 CD300EQ496F6 205 aaPredicted RBP7.07□□□□□ -1.28
UBR1-210ENST00000569337 TMEM37Q8WXS4 190 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 WWC2-AS2Q96NR7 200 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 ZNF471Q9BX82 626 aaPredicted RBP7.07□□□□□ -1.28
UBR1-210ENST00000569337 VSIRQ9H7M9 311 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 TUBA4BQ9H853 241 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 SLC39A9Q9NUM3 307 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 TECRQ9NZ01 308 aaKnown RBP7.07□□□□□ -1.28
UBR1-210ENST00000569337 MRPL27Q9P0M9 148 aaKnown RBP7.07□□□□□ -1.28
UBR1-210ENST00000569337 DOK5Q9P104 306 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 SELENOKQ9Y6D0 94 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 U3KQE9 123 aa7.07□□□□□ -1.28
UBR1-210ENST00000569337 K7EMT4 169 aa7.06□□□□□ -1.28
UBR1-210ENST00000569337 SCGB2A1O75556 95 aa7.06□□□□□ -1.28
UBR1-210ENST00000569337 FABP1P07148 127 aa7.06□□□□□ -1.28
UBR1-210ENST00000569337 C8orf88P0DMB2 117 aa7.06□□□□□ -1.28
UBR1-210ENST00000569337 ORM2P19652 201 aa7.06□□□□□ -1.28
UBR1-210ENST00000569337 CRYBB3P26998 211 aa7.06□□□□□ -1.28
UBR1-210ENST00000569337 GUCA2BQ16661 112 aa7.06□□□□□ -1.28
UBR1-210ENST00000569337 MORN5Q5VZ52 161 aa7.06□□□□□ -1.28
UBR1-210ENST00000569337 OR1B1Q8NGR6 318 aa7.06□□□□□ -1.28
UBR1-210ENST00000569337 STOML3Q8TAV4 291 aa7.06□□□□□ -1.28
UBR1-210ENST00000569337 MARC2Q969Z3 335 aa7.06□□□□□ -1.28
UBR1-210ENST00000569337 PSMG3Q9BT73 122 aaPredicted RBP7.06□□□□□ -1.28
UBR1-210ENST00000569337 PBDC1Q9BVG4 233 aa7.06□□□□□ -1.28
UBR1-210ENST00000569337 SLC25A32Q9H2D1 315 aa7.06□□□□□ -1.28
UBR1-210ENST00000569337 ZMAT4Q9H898 229 aa7.06□□□□□ -1.28
UBR1-210ENST00000569337 UFC1Q9Y3C8 167 aa7.06□□□□□ -1.28
UBR1-210ENST00000569337 TIMM9Q9Y5J7 89 aa7.06□□□□□ -1.28
UBR1-210ENST00000569337 DNAH9Q9NYC9 4486 aa7.05□□□□□ -1.28
UBR1-210ENST00000569337 IGHV3-66A0A0C4DH42 116 aa7.05□□□□□ -1.28
UBR1-210ENST00000569337 IGHV7-4-1A0A0J9YVY3 117 aa7.05□□□□□ -1.28
UBR1-210ENST00000569337 ZNF785A8K8V0 405 aa7.05□□□□□ -1.28
UBR1-210ENST00000569337 A8MZ25 164 aa7.05□□□□□ -1.28
UBR1-210ENST00000569337 HYPMO75409 117 aa7.05□□□□□ -1.28
UBR1-210ENST00000569337 EIF3GO75821 320 aaKnown RBP eCLIP7.05□□□□□ -1.28
UBR1-210ENST00000569337 SPP1P10451 314 aa7.05□□□□□ -1.28
UBR1-210ENST00000569337 ELLP55199 621 aaPredicted RBP7.05□□□□□ -1.28
UBR1-210ENST00000569337 CD81P60033 236 aa7.05□□□□□ -1.28
UBR1-210ENST00000569337 FFAR4Q5NUL3 377 aa7.05□□□□□ -1.28
UBR1-210ENST00000569337 SPATA31B1PQ5VZV4 182 aa7.05□□□□□ -1.28
UBR1-210ENST00000569337 SLC51BQ86UW2 128 aa7.05□□□□□ -1.28
UBR1-210ENST00000569337 BAP18Q8IXM2 172 aa7.05□□□□□ -1.28
UBR1-210ENST00000569337 ZNF709Q8N972 641 aa7.05□□□□□ -1.28
UBR1-210ENST00000569337 OR2G3Q8NGZ4 309 aa7.05□□□□□ -1.28
UBR1-210ENST00000569337 ST8SIA2Q92186 375 aa7.05□□□□□ -1.28
UBR1-210ENST00000569337 UHRF2Q96PU4 802 aa7.05□□□□□ -1.28
UBR1-210ENST00000569337 DAZ1Q9NQZ3 744 aaKnown RBP7.05□□□□□ -1.28
UBR1-210ENST00000569337 C19orf73Q9NVV2 129 aa7.05□□□□□ -1.28
UBR1-210ENST00000569337 SMPXQ9UHP9 88 aa7.05□□□□□ -1.28
UBR1-210ENST00000569337 TRAV5A0A0B4J249 113 aa7.04□□□□□ -1.28
UBR1-210ENST00000569337 C17orf112F2Z3M2 114 aa7.04□□□□□ -1.28
UBR1-210ENST00000569337 CHEK1O14757 476 aa7.04□□□□□ -1.28
UBR1-210ENST00000569337 CFDP00746 253 aaPredicted RBP7.04□□□□□ -1.28
UBR1-210ENST00000569337 OR5G3P0C626 314 aa7.04□□□□□ -1.28
UBR1-210ENST00000569337 NPPCP23582 126 aa7.04□□□□□ -1.28
UBR1-210ENST00000569337 RAB2AP61019 212 aa7.04□□□□□ -1.28
UBR1-210ENST00000569337 C10orf113Q5VZT2 155 aa7.04□□□□□ -1.28
UBR1-210ENST00000569337 LEMD1Q68G75 181 aa7.04□□□□□ -1.28
UBR1-210ENST00000569337 Q6ZRG5 221 aa7.04□□□□□ -1.28
UBR1-210ENST00000569337 TMED6Q8WW62 240 aa7.04□□□□□ -1.28
UBR1-210ENST00000569337 PPP1R14BQ96C90 147 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms