RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 TFPI2P48307 235 aa7.27□□□□□ -1.25
CLK3-220ENST00000567992 LYZP61626 148 aa7.27□□□□□ -1.25
CLK3-220ENST00000567992 VAMP2P63027 116 aa7.27□□□□□ -1.25
CLK3-220ENST00000567992 ZNF124Q15973 351 aa7.27□□□□□ -1.25
CLK3-220ENST00000567992 OR10P1Q8NGE3 313 aa7.27□□□□□ -1.25
CLK3-220ENST00000567992 DCANP1Q8TF63 244 aa7.27□□□□□ -1.25
CLK3-220ENST00000567992 PBDC1Q9BVG4 233 aa7.27□□□□□ -1.25
CLK3-220ENST00000567992 TUBA4BQ9H853 241 aa7.27□□□□□ -1.25
CLK3-220ENST00000567992 MAP6D1Q9H9H5 199 aa7.27□□□□□ -1.25
CLK3-220ENST00000567992 U3KQK5 164 aa7.27□□□□□ -1.25
CLK3-220ENST00000567992 SMCO3A2RU48 225 aa7.26□□□□□ -1.25
CLK3-220ENST00000567992 SMLR1H3BR10 107 aa7.26□□□□□ -1.25
CLK3-220ENST00000567992 K7EQG2 157 aa7.26□□□□□ -1.25
CLK3-220ENST00000567992 SSNA1O43805 119 aa7.26□□□□□ -1.25
CLK3-220ENST00000567992 CST7O76096 145 aa7.26□□□□□ -1.25
CLK3-220ENST00000567992 FABP1P07148 127 aa7.26□□□□□ -1.25
CLK3-220ENST00000567992 CXCL3P19876 107 aa7.26□□□□□ -1.25
CLK3-220ENST00000567992 SULT1A1P50225 295 aa7.26□□□□□ -1.25
CLK3-220ENST00000567992 CAV2P51636 162 aa7.26□□□□□ -1.25
CLK3-220ENST00000567992 SLC38A11Q08AI6 406 aa7.26□□□□□ -1.25
CLK3-220ENST00000567992 VWC2Q2TAL6 325 aa7.26□□□□□ -1.25
CLK3-220ENST00000567992 CYP2G1PQ6ZSU1 146 aa7.26□□□□□ -1.25
CLK3-220ENST00000567992 TMEM252Q8N6L7 170 aa7.26□□□□□ -1.25
CLK3-220ENST00000567992 GRAMD2BQ96HH9 432 aa7.26□□□□□ -1.25
CLK3-220ENST00000567992 GGACTQ9BVM4 153 aa7.26□□□□□ -1.25
CLK3-220ENST00000567992 OR5AC2Q9NZP5 309 aa7.26□□□□□ -1.25
CLK3-220ENST00000567992 HSPB11Q9Y547 144 aa7.26□□□□□ -1.25
CLK3-220ENST00000567992 KMT2CQ8NEZ4 4911 aaKnown RBP7.25□□□□□ -1.25
CLK3-220ENST00000567992 HELTA6NFD8 242 aa7.25□□□□□ -1.25
CLK3-220ENST00000567992 CFDP00746 253 aaPredicted RBP7.25□□□□□ -1.25
CLK3-220ENST00000567992 PVALBP20472 110 aaPredicted RBP7.25□□□□□ -1.25
CLK3-220ENST00000567992 PLP1P60201 277 aa7.25□□□□□ -1.25
CLK3-220ENST00000567992 LRRC37A5PQ49AS3 106 aa7.25□□□□□ -1.25
CLK3-220ENST00000567992 SIGLEC15Q6ZMC9 328 aa7.25□□□□□ -1.25
CLK3-220ENST00000567992 WFDC3Q8IUB2 231 aa7.25□□□□□ -1.25
CLK3-220ENST00000567992 APRG1Q8IVJ8 170 aa7.25□□□□□ -1.25
CLK3-220ENST00000567992 TMEM217Q8N7C4 229 aa7.25□□□□□ -1.25
CLK3-220ENST00000567992 BPIFCQ8NFQ6 507 aa7.25□□□□□ -1.25
CLK3-220ENST00000567992 STXBP6Q8NFX7 210 aa7.25□□□□□ -1.25
CLK3-220ENST00000567992 PPP1R1CQ8WVI7 109 aa7.25□□□□□ -1.25
CLK3-220ENST00000567992 NARS2Q96I59 477 aaKnown RBP7.25□□□□□ -1.25
CLK3-220ENST00000567992 C17orf77Q96MU5 243 aa7.25□□□□□ -1.25
CLK3-220ENST00000567992 RCHY1Q96PM5 261 aa7.25□□□□□ -1.25
CLK3-220ENST00000567992 MGST2Q99735 147 aa7.25□□□□□ -1.25
CLK3-220ENST00000567992 NPVFQ9HCQ7 196 aa7.25□□□□□ -1.25
CLK3-220ENST00000567992 RETNQ9HD89 108 aa7.25□□□□□ -1.25
CLK3-220ENST00000567992 MGAT4CQ9UBM8 478 aa7.25□□□□□ -1.25
CLK3-220ENST00000567992 SLC45A2Q9UMX9 530 aa7.25□□□□□ -1.25
CLK3-220ENST00000567992 LOC102724200A0A096LPH7 203 aaPredicted RBP7.24□□□□□ -1.25
CLK3-220ENST00000567992 GIPP09681 153 aaPredicted RBP7.24□□□□□ -1.25
CLK3-220ENST00000567992 LINC00869P0C866 280 aa7.24□□□□□ -1.25
CLK3-220ENST00000567992 NUP62P37198 522 aaPredicted RBP7.24□□□□□ -1.25
CLK3-220ENST00000567992 RPL11P62913 178 aaKnown RBP7.24□□□□□ -1.25
CLK3-220ENST00000567992 PAFAH1B2P68402 229 aa7.24□□□□□ -1.25
CLK3-220ENST00000567992 C1orf194Q5T5A4 169 aa7.24□□□□□ -1.25
CLK3-220ENST00000567992 TEPPQ6URK8 271 aa7.24□□□□□ -1.25
CLK3-220ENST00000567992 OR11H4Q8NGC9 324 aa7.24□□□□□ -1.25
CLK3-220ENST00000567992 ASB13Q8WXK3 278 aa7.24□□□□□ -1.25
CLK3-220ENST00000567992 SPATA25Q9BR10 227 aa7.24□□□□□ -1.25
CLK3-220ENST00000567992 RNF126Q9BV68 326 aa7.24□□□□□ -1.25
CLK3-220ENST00000567992 GGTLC1Q9BX51 225 aa7.24□□□□□ -1.25
CLK3-220ENST00000567992 WDR83OSQ9Y284 106 aa7.24□□□□□ -1.25
CLK3-220ENST00000567992 DYNC2H1Q8NCM8 4307 aaKnown RBP7.23□□□□□ -1.25
CLK3-220ENST00000567992 ZNF98A6NK75 572 aa7.23□□□□□ -1.25
CLK3-220ENST00000567992 E5RGE8 158 aa7.23□□□□□ -1.25
CLK3-220ENST00000567992 G3V3Q6 166 aa7.23□□□□□ -1.25
CLK3-220ENST00000567992 H3BRN7 92 aa7.23□□□□□ -1.25
CLK3-220ENST00000567992 DNASE2O00115 360 aaPredicted RBP7.23□□□□□ -1.25
CLK3-220ENST00000567992 SOCS3O14543 225 aa7.23□□□□□ -1.25
CLK3-220ENST00000567992 AGPAT2O15120 278 aa7.23□□□□□ -1.25
CLK3-220ENST00000567992 MPC2O95563 127 aa7.23□□□□□ -1.25
CLK3-220ENST00000567992 ORM2P19652 201 aa7.23□□□□□ -1.25
CLK3-220ENST00000567992 AP2S1P53680 142 aaPredicted RBP7.23□□□□□ -1.25
CLK3-220ENST00000567992 DEFB131AP59861 70 aa7.23□□□□□ -1.25
CLK3-220ENST00000567992 RAP2BP61225 183 aa7.23□□□□□ -1.25
CLK3-220ENST00000567992 SELENOTP62341 195 aa7.23□□□□□ -1.25
CLK3-220ENST00000567992 CYCSP99999 105 aaKnown RBP7.23□□□□□ -1.25
CLK3-220ENST00000567992 EWSR1Q01844 656 aaKnown RBP eCLIP7.23□□□□□ -1.25
CLK3-220ENST00000567992 LEMD1Q68G75 181 aa7.23□□□□□ -1.25
CLK3-220ENST00000567992 PATE2Q6UY27 113 aa7.23□□□□□ -1.25
CLK3-220ENST00000567992 STX12Q86Y82 276 aa7.23□□□□□ -1.25
CLK3-220ENST00000567992 OR1B1Q8NGR6 318 aa7.23□□□□□ -1.25
CLK3-220ENST00000567992 SCRT1Q9BWW7 348 aa7.23□□□□□ -1.25
CLK3-220ENST00000567992 SLC25A32Q9H2D1 315 aa7.23□□□□□ -1.25
CLK3-220ENST00000567992 ZMAT4Q9H898 229 aa7.23□□□□□ -1.25
CLK3-220ENST00000567992 NRN1Q9NPD7 142 aa7.23□□□□□ -1.25
CLK3-220ENST00000567992 UQCC1Q9NVA1 299 aa7.23□□□□□ -1.25
CLK3-220ENST00000567992 DOK5Q9P104 306 aa7.23□□□□□ -1.25
CLK3-220ENST00000567992 UBE2L5PA0A1B0GUS4 154 aa7.22□□□□□ -1.25
CLK3-220ENST00000567992 ZNF688P0C7X2 276 aa7.22□□□□□ -1.25
CLK3-220ENST00000567992 LYL1P12980 280 aa7.22□□□□□ -1.25
CLK3-220ENST00000567992 C4BPBP20851 252 aa7.22□□□□□ -1.25
CLK3-220ENST00000567992 S100A11P31949 105 aa7.22□□□□□ -1.25
CLK3-220ENST00000567992 CMC4P56277 68 aaPredicted RBP7.22□□□□□ -1.25
CLK3-220ENST00000567992 PRR20EP86478 221 aa7.22□□□□□ -1.25
CLK3-220ENST00000567992 PRR20CP86479 221 aa7.22□□□□□ -1.25
CLK3-220ENST00000567992 PRR20DP86480 221 aa7.22□□□□□ -1.25
CLK3-220ENST00000567992 PRR20BP86481 221 aa7.22□□□□□ -1.25
CLK3-220ENST00000567992 PRR20AP86496 221 aa7.22□□□□□ -1.25
CLK3-220ENST00000567992 NHLH2Q02577 135 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms