RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 GPHB5Q86YW7 130 aa10.23□□□□□ -0.77
CLK3-218ENST00000566926 STPG3Q8N7X2 389 aa10.23□□□□□ -0.77
CLK3-218ENST00000566926 RNF2Q99496 336 aa10.23□□□□□ -0.77
CLK3-218ENST00000566926 B9D2Q9BPU9 175 aa10.23□□□□□ -0.77
CLK3-218ENST00000566926 SLC39A9Q9NUM3 307 aa10.23□□□□□ -0.77
CLK3-218ENST00000566926 IGKV1OR2-108A0A075B7D4 117 aa10.22□□□□□ -0.77
CLK3-218ENST00000566926 PPP5D1E7EU14 171 aa10.22□□□□□ -0.77
CLK3-218ENST00000566926 LGALS9O00182 355 aa10.22□□□□□ -0.77
CLK3-218ENST00000566926 GNG7O60262 68 aa10.22□□□□□ -0.77
CLK3-218ENST00000566926 IGHV3-23P01764 117 aa10.22□□□□□ -0.77
CLK3-218ENST00000566926 HBE1P02100 147 aa10.22□□□□□ -0.77
CLK3-218ENST00000566926 IGLC1P0CG04 106 aa10.22□□□□□ -0.77
CLK3-218ENST00000566926 GP9P14770 177 aa10.22□□□□□ -0.77
CLK3-218ENST00000566926 S100A7P31151 101 aa10.22□□□□□ -0.77
CLK3-218ENST00000566926 BPIFCQ8NFQ6 507 aa10.22□□□□□ -0.77
CLK3-218ENST00000566926 OR1L4Q8NGR5 311 aa10.22□□□□□ -0.77
CLK3-218ENST00000566926 OR2K2Q8NGT1 345 aa10.22□□□□□ -0.77
CLK3-218ENST00000566926 FAM213BQ8TBF2 198 aa10.22□□□□□ -0.77
CLK3-218ENST00000566926 CCDC140Q96MF4 163 aa10.22□□□□□ -0.77
CLK3-218ENST00000566926 PFDN5Q99471 154 aa10.22□□□□□ -0.77
CLK3-218ENST00000566926 PFDN2Q9UHV9 154 aa10.22□□□□□ -0.77
CLK3-218ENST00000566926 SMAD5-AS1Q9Y6J3 95 aa10.22□□□□□ -0.77
CLK3-218ENST00000566926 ELOA3CA0A087WX78 387 aaPredicted RBP10.21□□□□□ -0.77
CLK3-218ENST00000566926 TRAV1-1A0A0B4J248 108 aa10.21□□□□□ -0.77
CLK3-218ENST00000566926 LINC00862A6NCI5 91 aa10.21□□□□□ -0.77
CLK3-218ENST00000566926 MFSD2BA6NFX1 497 aa10.21□□□□□ -0.77
CLK3-218ENST00000566926 OR2C1O95371 312 aa10.21□□□□□ -0.77
CLK3-218ENST00000566926 CLEC3BP05452 202 aa10.21□□□□□ -0.77
CLK3-218ENST00000566926 CSN3P07498 182 aa10.21□□□□□ -0.77
CLK3-218ENST00000566926 ELLP55199 621 aaPredicted RBP10.21□□□□□ -0.77
CLK3-218ENST00000566926 YPEL3P61236 119 aaPredicted RBP10.21□□□□□ -0.77
CLK3-218ENST00000566926 MLANAQ16655 118 aa10.21□□□□□ -0.77
CLK3-218ENST00000566926 Q56UQ5 140 aa10.21□□□□□ -0.77
CLK3-218ENST00000566926 LCN12Q6JVE5 192 aa10.21□□□□□ -0.77
CLK3-218ENST00000566926 SPSB3Q6PJ21 355 aa10.21□□□□□ -0.77
CLK3-218ENST00000566926 IL34Q6ZMJ4 242 aa10.21□□□□□ -0.77
CLK3-218ENST00000566926 OR10G4Q8NGN3 311 aa10.21□□□□□ -0.77
CLK3-218ENST00000566926 OR10G9Q8NGN4 311 aa10.21□□□□□ -0.77
CLK3-218ENST00000566926 OR10G7Q8NGN6 311 aa10.21□□□□□ -0.77
CLK3-218ENST00000566926 ZNF502Q8TBZ5 544 aa10.21□□□□□ -0.77
CLK3-218ENST00000566926 GATAD1Q8WUU5 269 aa10.21□□□□□ -0.77
CLK3-218ENST00000566926 ACTR3CQ9C0K3 210 aaPredicted RBP10.21□□□□□ -0.77
CLK3-218ENST00000566926 RPRMQ9NS64 109 aa10.21□□□□□ -0.77
CLK3-218ENST00000566926 RNF24Q9Y225 148 aa10.21□□□□□ -0.77
CLK3-218ENST00000566926 S4R3C0 116 aa10.21□□□□□ -0.77
CLK3-218ENST00000566926 IGKV1D-37A0A075B6S9 117 aa10.2□□□□□ -0.78
CLK3-218ENST00000566926 CTXND1A0A1B0GTU2 59 aa10.2□□□□□ -0.78
CLK3-218ENST00000566926 NUPL2O15504 423 aaKnown RBP10.2□□□□□ -0.78
CLK3-218ENST00000566926 H2AFB1P0C5Y9 115 aa10.2□□□□□ -0.78
CLK3-218ENST00000566926 PLP1P60201 277 aa10.2□□□□□ -0.78
CLK3-218ENST00000566926 RHOBP62745 196 aa10.2□□□□□ -0.78
CLK3-218ENST00000566926 MIC13Q5XKP0 118 aa10.2□□□□□ -0.78
CLK3-218ENST00000566926 LYPD6BQ8NI32 183 aa10.2□□□□□ -0.78
CLK3-218ENST00000566926 DYNLRB2Q8TF09 96 aa10.2□□□□□ -0.78
CLK3-218ENST00000566926 A0A1W2PPV4 95 aa10.19□□□□□ -0.78
CLK3-218ENST00000566926 ZNF320A2RRD8 509 aa10.19□□□□□ -0.78
CLK3-218ENST00000566926 TOMM40O96008 361 aa10.19□□□□□ -0.78
CLK3-218ENST00000566926 LINC00869P0C866 280 aa10.19□□□□□ -0.78
CLK3-218ENST00000566926 NHLRC4P0CG21 123 aaPredicted RBP10.19□□□□□ -0.78
CLK3-218ENST00000566926 RD3LP0DJH9 198 aa10.19□□□□□ -0.78
CLK3-218ENST00000566926 GPR183P32249 361 aa10.19□□□□□ -0.78
CLK3-218ENST00000566926 MBD3L1Q8WWY6 194 aa10.19□□□□□ -0.78
CLK3-218ENST00000566926 MRPL32Q9BYC8 188 aaKnown RBP10.19□□□□□ -0.78
CLK3-218ENST00000566926 TECRQ9NZ01 308 aaKnown RBP10.19□□□□□ -0.78
CLK3-218ENST00000566926 PLA2G2EQ9NZK7 142 aa10.19□□□□□ -0.78
CLK3-218ENST00000566926 MRPL36Q9P0J6 103 aaKnown RBP10.19□□□□□ -0.78
CLK3-218ENST00000566926 IGHV3-21A0A0B4J1V1 117 aa10.18□□□□□ -0.78
CLK3-218ENST00000566926 C2orf70A6NJV1 201 aa10.18□□□□□ -0.78
CLK3-218ENST00000566926 TGOLN2O43493 480 aa10.18□□□□□ -0.78
CLK3-218ENST00000566926 YIF1AO95070 293 aa10.18□□□□□ -0.78
CLK3-218ENST00000566926 IGKV1-17P01599 117 aa10.18□□□□□ -0.78
CLK3-218ENST00000566926 IGHV3-48P01763 117 aa10.18□□□□□ -0.78
CLK3-218ENST00000566926 TAGLN2P37802 199 aaKnown RBP10.18□□□□□ -0.78
CLK3-218ENST00000566926 CDC34P49427 236 aaPredicted RBP10.18□□□□□ -0.78
CLK3-218ENST00000566926 TAS2R45P59539 299 aa10.18□□□□□ -0.78
CLK3-218ENST00000566926 RELQ04864 619 aaPredicted RBP10.18□□□□□ -0.78
CLK3-218ENST00000566926 RPP25LQ8N5L8 163 aaKnown RBP10.18□□□□□ -0.78
CLK3-218ENST00000566926 OR51G1Q8NGK1 321 aa10.18□□□□□ -0.78
CLK3-218ENST00000566926 Q8WTZ3 238 aa10.18□□□□□ -0.78
CLK3-218ENST00000566926 MARC2Q969Z3 335 aa10.18□□□□□ -0.78
CLK3-218ENST00000566926 DNAJC4Q9NNZ3 241 aa10.18□□□□□ -0.78
CLK3-218ENST00000566926 UFC1Q9Y3C8 167 aa10.18□□□□□ -0.78
CLK3-218ENST00000566926 RAB19A4D1S5 217 aa10.17□□□□□ -0.78
CLK3-218ENST00000566926 MAP1LC3B2A6NCE7 125 aa10.17□□□□□ -0.78
CLK3-218ENST00000566926 OR2T8A6NH00 312 aa10.17□□□□□ -0.78
CLK3-218ENST00000566926 A8MWP6 167 aa10.17□□□□□ -0.78
CLK3-218ENST00000566926 COX7A2P2O60397 106 aa10.17□□□□□ -0.78
CLK3-218ENST00000566926 HYPMO75409 117 aa10.17□□□□□ -0.78
CLK3-218ENST00000566926 OR5G3P0C626 314 aa10.17□□□□□ -0.78
CLK3-218ENST00000566926 FOLR2P14207 255 aa10.17□□□□□ -0.78
CLK3-218ENST00000566926 FHITP49789 147 aa10.17□□□□□ -0.78
CLK3-218ENST00000566926 PPT1P50897 306 aa10.17□□□□□ -0.78
CLK3-218ENST00000566926 ZNF90Q03938 601 aa10.17□□□□□ -0.78
CLK3-218ENST00000566926 PMS2P11Q13670 270 aa10.17□□□□□ -0.78
CLK3-218ENST00000566926 GTSCR1Q86UQ5 136 aa10.17□□□□□ -0.78
CLK3-218ENST00000566926 STXBP6Q8NFX7 210 aa10.17□□□□□ -0.78
CLK3-218ENST00000566926 SFT2D1Q8WV19 159 aa10.17□□□□□ -0.78
CLK3-218ENST00000566926 MAP1LC3BQ9GZQ8 125 aa10.17□□□□□ -0.78
CLK3-218ENST00000566926 HRH4Q9H3N8 390 aa10.17□□□□□ -0.78
CLK3-218ENST00000566926 F8W735 103 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms