RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 OR8B2Q96RD0 313 aa11.4□□□□□ -0.59
CDH1-209ENST00000566510 CA7P43166 264 aa11.39□□□□□ -0.59
CDH1-209ENST00000566510 MRGPRG-AS1Q2M3A8 158 aa11.39□□□□□ -0.59
CDH1-209ENST00000566510 C5orf17Q8NAS9 161 aa11.39□□□□□ -0.59
CDH1-209ENST00000566510 TMEM133Q9H2Q1 129 aa11.39□□□□□ -0.59
CDH1-209ENST00000566510 TIMM8BQ9Y5J9 83 aaPredicted RBP11.39□□□□□ -0.59
CDH1-209ENST00000566510 INSIG2Q9Y5U4 225 aa11.39□□□□□ -0.59
CDH1-209ENST00000566510 GAGE1Q13065 139 aa11.39□□□□□ -0.59
CDH1-209ENST00000566510 KLF5Q13887 457 aaPredicted RBP11.39□□□□□ -0.59
CDH1-209ENST00000566510 TMEM155Q4W5P6 130 aa11.39□□□□□ -0.59
CDH1-209ENST00000566510 ATP5L2Q7Z4Y8 100 aa11.39□□□□□ -0.59
CDH1-209ENST00000566510 GTSF1Q8WW33 167 aa11.39□□□□□ -0.59
CDH1-209ENST00000566510 TRGV9Q99603 122 aa11.39□□□□□ -0.59
CDH1-209ENST00000566510 SIAH2O43255 324 aa11.38□□□□□ -0.59
CDH1-209ENST00000566510 RBP4P02753 201 aa11.38□□□□□ -0.59
CDH1-209ENST00000566510 TCRAP04437 139 aa11.38□□□□□ -0.59
CDH1-209ENST00000566510 PLGLAQ15195 96 aa11.38□□□□□ -0.59
CDH1-209ENST00000566510 PRSS33Q8NF86 280 aa11.38□□□□□ -0.59
CDH1-209ENST00000566510 FMC1Q96HJ9 113 aa11.38□□□□□ -0.59
CDH1-209ENST00000566510 KLF12Q9Y4X4 402 aa11.38□□□□□ -0.59
CDH1-209ENST00000566510 ABCA4P78363 2273 aa11.38□□□□□ -0.59
CDH1-209ENST00000566510 PTPRZ1P23471 2315 aaPredicted RBP11.38□□□□□ -0.59
CDH1-209ENST00000566510 OR2J3O76001 311 aa11.38□□□□□ -0.59
CDH1-209ENST00000566510 TSPOP30536 169 aa11.38□□□□□ -0.59
CDH1-209ENST00000566510 DLX6P56179 175 aa11.38□□□□□ -0.59
CDH1-209ENST00000566510 PRNTQ86SH4 94 aa11.38□□□□□ -0.59
CDH1-209ENST00000566510 EXOC3-AS1Q8N2X6 119 aa11.38□□□□□ -0.59
CDH1-209ENST00000566510 TMEM116Q8NCL8 245 aa11.38□□□□□ -0.59
CDH1-209ENST00000566510 C8orf46Q8TAG6 207 aa11.38□□□□□ -0.59
CDH1-209ENST00000566510 HIGD1AQ9Y241 93 aa11.38□□□□□ -0.59
CDH1-209ENST00000566510 ZFP30Q9Y2G7 519 aa11.38□□□□□ -0.59
CDH1-209ENST00000566510 LYNX1G3V0Z9 82 aa11.37□□□□□ -0.59
CDH1-209ENST00000566510 TOMM40O96008 361 aa11.37□□□□□ -0.59
CDH1-209ENST00000566510 CRYGCP07315 174 aa11.37□□□□□ -0.59
CDH1-209ENST00000566510 LYNX1P0DP58 116 aa11.37□□□□□ -0.59
CDH1-209ENST00000566510 PSG1P11464 419 aa11.37□□□□□ -0.59
CDH1-209ENST00000566510 GP9P14770 177 aa11.37□□□□□ -0.59
CDH1-209ENST00000566510 COX7A1P24310 79 aa11.37□□□□□ -0.59
CDH1-209ENST00000566510 COL8A1P27658 744 aa11.37□□□□□ -0.59
CDH1-209ENST00000566510 GFRALQ6UXV0 394 aa11.37□□□□□ -0.59
CDH1-209ENST00000566510 CIARTQ8N365 385 aaPredicted RBP11.37□□□□□ -0.59
CDH1-209ENST00000566510 TEX45Q8NA69 505 aa11.37□□□□□ -0.59
CDH1-209ENST00000566510 ZNF596Q8TC21 504 aa11.37□□□□□ -0.59
CDH1-209ENST00000566510 MLST8Q9BVC4 326 aa11.37□□□□□ -0.59
CDH1-209ENST00000566510 SIGLEC9Q9Y336 463 aa11.37□□□□□ -0.59
CDH1-209ENST00000566510 TRAV9-2A0A087WT02 112 aa11.37□□□□□ -0.59
CDH1-209ENST00000566510 A0A1B0GXF2 115 aa11.37□□□□□ -0.59
CDH1-209ENST00000566510 CHEK1O14757 476 aa11.37□□□□□ -0.59
CDH1-209ENST00000566510 TCF21O43680 179 aa11.37□□□□□ -0.59
CDH1-209ENST00000566510 C8orf31Q8N9H6 132 aa11.37□□□□□ -0.59
CDH1-209ENST00000566510 OR8B3Q8NGG8 313 aa11.37□□□□□ -0.59
CDH1-209ENST00000566510 FBXL15Q9H469 300 aa11.37□□□□□ -0.59
CDH1-209ENST00000566510 IGHV2-26A0A0B4J1V2 119 aa11.36□□□□□ -0.59
CDH1-209ENST00000566510 IGHV1-69-2A0A0G2JMI3 117 aa11.36□□□□□ -0.59
CDH1-209ENST00000566510 C2orf70A6NJV1 201 aa11.36□□□□□ -0.59
CDH1-209ENST00000566510 H0Y8G0 127 aa11.36□□□□□ -0.59
CDH1-209ENST00000566510 TNFRSF13BO14836 293 aaPredicted RBP11.36□□□□□ -0.59
CDH1-209ENST00000566510 LTAP01374 205 aa11.36□□□□□ -0.59
CDH1-209ENST00000566510 IGLL1P15814 213 aa11.36□□□□□ -0.59
CDH1-209ENST00000566510 IGF2-ASQ6U949 168 aa11.36□□□□□ -0.59
CDH1-209ENST00000566510 GOLT1AQ6ZVE7 132 aa11.36□□□□□ -0.59
CDH1-209ENST00000566510 PPP1R27Q86WC6 154 aa11.36□□□□□ -0.59
CDH1-209ENST00000566510 ASCL2Q99929 193 aa11.36□□□□□ -0.59
CDH1-209ENST00000566510 TMEM70Q9BUB7 260 aa11.36□□□□□ -0.59
CDH1-209ENST00000566510 RELNP78509 3460 aa11.36□□□□□ -0.59
CDH1-209ENST00000566510 Q6ZVH6 145 aa11.36□□□□□ -0.59
CDH1-209ENST00000566510 SPATA12Q7Z6I5 190 aa11.36□□□□□ -0.59
CDH1-209ENST00000566510 ABHD17AQ96GS6 310 aa11.36□□□□□ -0.59
CDH1-209ENST00000566510 ZNF138P52744 262 aa11.35□□□□□ -0.59
CDH1-209ENST00000566510 RBPMS2Q6ZRY4 209 aaKnown RBP11.35□□□□□ -0.59
CDH1-209ENST00000566510 URB1-AS1Q96HZ7 61 aa11.35□□□□□ -0.59
CDH1-209ENST00000566510 PRSS22Q9GZN4 317 aa11.35□□□□□ -0.59
CDH1-209ENST00000566510 ARHGAP32A7KAX9 2087 aa11.35□□□□□ -0.59
CDH1-209ENST00000566510 IGHV1-3A0A0C4DH29 117 aa11.35□□□□□ -0.59
CDH1-209ENST00000566510 E7EQL1 145 aa11.35□□□□□ -0.59
CDH1-209ENST00000566510 CNIH1O95406 144 aa11.35□□□□□ -0.59
CDH1-209ENST00000566510 Q71RC1 249 aaPredicted RBP11.35□□□□□ -0.59
CDH1-209ENST00000566510 SMIM12Q96EX1 92 aa11.35□□□□□ -0.59
CDH1-209ENST00000566510 RASL11BQ9BPW5 248 aa11.35□□□□□ -0.59
CDH1-209ENST00000566510 F11RQ9Y624 299 aaKnown RBP11.35□□□□□ -0.59
CDH1-209ENST00000566510 CSN3P07498 182 aa11.34□□□□□ -0.59
CDH1-209ENST00000566510 LINC00173Q6ZV60 143 aa11.34□□□□□ -0.59
CDH1-209ENST00000566510 SLC25A39Q9BZJ4 359 aaPredicted RBP11.34□□□□□ -0.59
CDH1-209ENST00000566510 C19orf71A6NCJ1 209 aa11.34□□□□□ -0.59
CDH1-209ENST00000566510 OR4C46A6NHA9 309 aa11.34□□□□□ -0.59
CDH1-209ENST00000566510 NDUFB8O95169 186 aa11.34□□□□□ -0.59
CDH1-209ENST00000566510 LINC00614P0C842 121 aa11.34□□□□□ -0.59
CDH1-209ENST00000566510 RPEQ96AT9 228 aa11.34□□□□□ -0.59
CDH1-209ENST00000566510 KAAG1Q9UBP8 84 aa11.34□□□□□ -0.59
CDH1-209ENST00000566510 TP73-AS1Q9UF72 201 aa11.34□□□□□ -0.59
CDH1-209ENST00000566510 RALYQ9UKM9 306 aaKnown RBP11.34□□□□□ -0.59
CDH1-209ENST00000566510 IGHV1-24A0A0C4DH33 117 aa11.33□□□□□ -0.59
CDH1-209ENST00000566510 LEPROTL1O95214 131 aa11.33□□□□□ -0.59
CDH1-209ENST00000566510 UNQ5815/PRO19632Q6UWF5 114 aa11.33□□□□□ -0.59
CDH1-209ENST00000566510 SRSF12Q8WXF0 261 aaKnown RBP11.33□□□□□ -0.59
CDH1-209ENST00000566510 TPPP3Q9BW30 176 aa11.33□□□□□ -0.59
CDH1-209ENST00000566510 DCHS2Q6V1P9 2916 aa11.33□□□□□ -0.6
CDH1-209ENST00000566510 BUB1B-PAK6H3BSN5 160 aa11.33□□□□□ -0.6
CDH1-209ENST00000566510 Q86TA4 180 aa11.33□□□□□ -0.6
CDH1-209ENST00000566510 MCRIP2Q9BUT9 160 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms