RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 NPPCP23582 126 aa13.15□□□□□ -0.3
RAB40C-210ENST00000566290 ATP5G3P48201 142 aa13.15□□□□□ -0.3
RAB40C-210ENST00000566290 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.15□□□□□ -0.3
RAB40C-210ENST00000566290 OR5AU1Q8NGC0 362 aa13.15□□□□□ -0.3
RAB40C-210ENST00000566290 MRPL27Q9P0M9 148 aaKnown RBP13.15□□□□□ -0.3
RAB40C-210ENST00000566290 A0A0U1RQK1 487 aa13.14□□□□□ -0.31
RAB40C-210ENST00000566290 OR7C2O60412 319 aa13.14□□□□□ -0.31
RAB40C-210ENST00000566290 CEBPGP53567 150 aa13.14□□□□□ -0.31
RAB40C-210ENST00000566290 KLF17Q5JT82 389 aaPredicted RBP13.14□□□□□ -0.31
RAB40C-210ENST00000566290 CST9LP1Q5W188 147 aa13.14□□□□□ -0.31
RAB40C-210ENST00000566290 RUSC1-AS1Q66K80 236 aa13.14□□□□□ -0.31
RAB40C-210ENST00000566290 ZNF343Q6P1L6 599 aa13.14□□□□□ -0.31
RAB40C-210ENST00000566290 C19orf35Q6ZS72 473 aa13.14□□□□□ -0.31
RAB40C-210ENST00000566290 LINC00305Q7Z4B0 112 aa13.14□□□□□ -0.31
RAB40C-210ENST00000566290 ANAPC16Q96DE5 110 aa13.14□□□□□ -0.31
RAB40C-210ENST00000566290 WI2-2373I1.2A0A1W2PRP0 233 aa13.13□□□□□ -0.31
RAB40C-210ENST00000566290 H3BUA1 57 aa13.13□□□□□ -0.31
RAB40C-210ENST00000566290 CLDN34H7C241 214 aa13.13□□□□□ -0.31
RAB40C-210ENST00000566290 NUPL2O15504 423 aaKnown RBP13.13□□□□□ -0.31
RAB40C-210ENST00000566290 IGF1P05019 195 aa13.13□□□□□ -0.31
RAB40C-210ENST00000566290 IGHV4-38-2P0DP08 117 aa13.13□□□□□ -0.31
RAB40C-210ENST00000566290 PSG1P11464 419 aa13.13□□□□□ -0.31
RAB40C-210ENST00000566290 S100A7P31151 101 aa13.13□□□□□ -0.31
RAB40C-210ENST00000566290 RPL23P62829 140 aaKnown RBP13.13□□□□□ -0.31
RAB40C-210ENST00000566290 UBE2L3P68036 154 aaKnown RBP13.13□□□□□ -0.31
RAB40C-210ENST00000566290 HIST1H2BAQ96A08 127 aa13.13□□□□□ -0.31
RAB40C-210ENST00000566290 FXYD5Q96DB9 178 aa13.13□□□□□ -0.31
RAB40C-210ENST00000566290 HSPB9Q9BQS6 159 aa13.13□□□□□ -0.31
RAB40C-210ENST00000566290 FAM103A1Q9BTL3 118 aaKnown RBP13.13□□□□□ -0.31
RAB40C-210ENST00000566290 PAXXQ9BUH6 204 aa13.13□□□□□ -0.31
RAB40C-210ENST00000566290 C20orf24Q9BUV8 137 aa13.13□□□□□ -0.31
RAB40C-210ENST00000566290 OR51M1Q9H341 326 aa13.13□□□□□ -0.31
RAB40C-210ENST00000566290 C21orf62Q9NYP8 219 aa13.13□□□□□ -0.31
RAB40C-210ENST00000566290 HIGD1AQ9Y241 93 aa13.13□□□□□ -0.31
RAB40C-210ENST00000566290 TMA7Q9Y2S6 64 aaKnown RBP13.13□□□□□ -0.31
RAB40C-210ENST00000566290 PLXNB1O43157 2135 aa13.12□□□□□ -0.31
RAB40C-210ENST00000566290 NOTCH1P46531 2555 aa13.12□□□□□ -0.31
RAB40C-210ENST00000566290 F8W735 103 aaPredicted RBP13.12□□□□□ -0.31
RAB40C-210ENST00000566290 ATP6V0E1O15342 81 aa13.12□□□□□ -0.31
RAB40C-210ENST00000566290 TCF21O43680 179 aa13.12□□□□□ -0.31
RAB40C-210ENST00000566290 RD3LP0DJH9 198 aa13.12□□□□□ -0.31
RAB40C-210ENST00000566290 APELAP0DMC3 54 aa13.12□□□□□ -0.31
RAB40C-210ENST00000566290 GP9P14770 177 aa13.12□□□□□ -0.31
RAB40C-210ENST00000566290 MYCNOSP40205 109 aa13.12□□□□□ -0.31
RAB40C-210ENST00000566290 UBE2G2P60604 165 aa13.12□□□□□ -0.31
RAB40C-210ENST00000566290 NECAP1Q8NC96 275 aa13.12□□□□□ -0.31
RAB40C-210ENST00000566290 H3BRN7 92 aa13.11□□□□□ -0.31
RAB40C-210ENST00000566290 PPP1R2P9O14990 202 aa13.11□□□□□ -0.31
RAB40C-210ENST00000566290 TGOLN2O43493 480 aa13.11□□□□□ -0.31
RAB40C-210ENST00000566290 AMY1AP04745 511 aa13.11□□□□□ -0.31
RAB40C-210ENST00000566290 DEFA6Q01524 100 aa13.11□□□□□ -0.31
RAB40C-210ENST00000566290 MORN5Q5VZ52 161 aa13.11□□□□□ -0.31
RAB40C-210ENST00000566290 LINC01551Q86U37 167 aa13.11□□□□□ -0.31
RAB40C-210ENST00000566290 C2CD4CQ8TF44 421 aa13.11□□□□□ -0.31
RAB40C-210ENST00000566290 TRRAPQ9Y4A5 3859 aa13.11□□□□□ -0.31
RAB40C-210ENST00000566290 GGTLC3B5MD39 225 aa13.1□□□□□ -0.31
RAB40C-210ENST00000566290 GNG7O60262 68 aa13.1□□□□□ -0.31
RAB40C-210ENST00000566290 NDUFB4O95168 129 aa13.1□□□□□ -0.31
RAB40C-210ENST00000566290 IGHV3-48P01763 117 aa13.1□□□□□ -0.31
RAB40C-210ENST00000566290 IGHG2P01859 326 aa13.1□□□□□ -0.31
RAB40C-210ENST00000566290 FLI1Q01543 452 aaPredicted RBP13.1□□□□□ -0.31
RAB40C-210ENST00000566290 TIGITQ495A1 244 aa13.1□□□□□ -0.31
RAB40C-210ENST00000566290 UNQ5815/PRO19632Q6UWF5 114 aa13.1□□□□□ -0.31
RAB40C-210ENST00000566290 BRD3OSQ6XYD6 125 aa13.1□□□□□ -0.31
RAB40C-210ENST00000566290 C1QL4Q86Z23 238 aa13.1□□□□□ -0.31
RAB40C-210ENST00000566290 TEX29Q8N6K0 151 aa13.1□□□□□ -0.31
RAB40C-210ENST00000566290 ZNF491Q8N8L2 437 aa13.1□□□□□ -0.31
RAB40C-210ENST00000566290 OR1B1Q8NGR6 318 aa13.1□□□□□ -0.31
RAB40C-210ENST00000566290 ZNF502Q8TBZ5 544 aa13.1□□□□□ -0.31
RAB40C-210ENST00000566290 RNF125Q96EQ8 232 aa13.1□□□□□ -0.31
RAB40C-210ENST00000566290 SMIM12Q96EX1 92 aa13.1□□□□□ -0.31
RAB40C-210ENST00000566290 IMMP2LQ96T52 175 aa13.1□□□□□ -0.31
RAB40C-210ENST00000566290 SHANK2-AS3Q9BTD1 123 aa13.1□□□□□ -0.31
RAB40C-210ENST00000566290 SOX21Q9Y651 276 aaPredicted RBP13.1□□□□□ -0.31
RAB40C-210ENST00000566290 TRBV24-1A0A075B6N3 115 aa13.09□□□□□ -0.31
RAB40C-210ENST00000566290 SCO2A0A1W2PP80 73 aa13.09□□□□□ -0.31
RAB40C-210ENST00000566290 FAM223BA6NKX1 122 aa13.09□□□□□ -0.31
RAB40C-210ENST00000566290 NDUFB8O95169 186 aa13.09□□□□□ -0.31
RAB40C-210ENST00000566290 TAS2R60P59551 318 aa13.09□□□□□ -0.31
RAB40C-210ENST00000566290 FAM223AQ8IWN6 122 aa13.09□□□□□ -0.31
RAB40C-210ENST00000566290 BTF3L4Q96K17 158 aa13.09□□□□□ -0.31
RAB40C-210ENST00000566290 PRDM13Q9H4Q3 707 aa13.09□□□□□ -0.31
RAB40C-210ENST00000566290 PRKDCP78527 4128 aaKnown RBP13.08□□□□□ -0.31
RAB40C-210ENST00000566290 IGHV3OR16-10A0A075B7F0 116 aa13.08□□□□□ -0.32
RAB40C-210ENST00000566290 ORM2P19652 201 aa13.08□□□□□ -0.32
RAB40C-210ENST00000566290 RAB5AP20339 215 aa13.08□□□□□ -0.32
RAB40C-210ENST00000566290 AKR1C3P42330 323 aa13.08□□□□□ -0.32
RAB40C-210ENST00000566290 ADIRFQ15847 76 aa13.08□□□□□ -0.32
RAB40C-210ENST00000566290 ZNF674Q2M3X9 581 aa13.08□□□□□ -0.32
RAB40C-210ENST00000566290 BCL6BQ8N143 479 aaPredicted RBP13.08□□□□□ -0.32
RAB40C-210ENST00000566290 LYPD1Q8N2G4 141 aa13.08□□□□□ -0.32
RAB40C-210ENST00000566290 ARL6IP6Q8N6S5 226 aa13.08□□□□□ -0.32
RAB40C-210ENST00000566290 OR5R1Q8NH85 324 aa13.08□□□□□ -0.32
RAB40C-210ENST00000566290 Q8WTZ3 238 aa13.08□□□□□ -0.32
RAB40C-210ENST00000566290 ISOC2Q96AB3 205 aa13.08□□□□□ -0.32
RAB40C-210ENST00000566290 PYGO2Q9BRQ0 406 aa13.08□□□□□ -0.32
RAB40C-210ENST00000566290 SLC25A39Q9BZJ4 359 aaPredicted RBP13.08□□□□□ -0.32
RAB40C-210ENST00000566290 FBXL7Q9UJT9 491 aa13.08□□□□□ -0.32
RAB40C-210ENST00000566290 TRBV20OR9-2A0A075B6H5 130 aa13.07□□□□□ -0.32
RAB40C-210ENST00000566290 TRBV7-1A0A0A6YYK4 115 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms