RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 ULBP3Q9BZM4 244 aa1.32□□□□□ -2.2
CHD9-215ENST00000565442 MRPL27Q9P0M9 148 aaKnown RBP1.32□□□□□ -2.2
CHD9-215ENST00000565442 CDK5RAP2Q96SN8 1893 aa1.32□□□□□ -2.2
CHD9-215ENST00000565442 MYH3P11055 1940 aa1.32□□□□□ -2.2
CHD9-215ENST00000565442 LRRC37AA6NMS7 1700 aa1.32□□□□□ -2.2
CHD9-215ENST00000565442 KIF13BQ9NQT8 1826 aa1.31□□□□□ -2.2
CHD9-215ENST00000565442 EP400Q96L91 3159 aa1.31□□□□□ -2.2
CHD9-215ENST00000565442 INTS1Q8N201 2190 aaKnown RBP1.31□□□□□ -2.2
CHD9-215ENST00000565442 DOCK5Q9H7D0 1870 aa1.31□□□□□ -2.2
CHD9-215ENST00000565442 DUOX1Q9NRD9 1551 aa1.31□□□□□ -2.2
CHD9-215ENST00000565442 EXOC1LA0A1B0GW35 172 aa1.31□□□□□ -2.2
CHD9-215ENST00000565442 CRYZL1O95825 349 aa1.31□□□□□ -2.2
CHD9-215ENST00000565442 SHBGP04278 402 aa1.31□□□□□ -2.2
CHD9-215ENST00000565442 ARL14EPLP0DKL9 152 aa1.31□□□□□ -2.2
CHD9-215ENST00000565442 OMPP47874 163 aa1.31□□□□□ -2.2
CHD9-215ENST00000565442 CEBPGP53567 150 aa1.31□□□□□ -2.2
CHD9-215ENST00000565442 DEFB132Q7Z7B7 95 aa1.31□□□□□ -2.2
CHD9-215ENST00000565442 PFN4Q8NHR9 129 aa1.31□□□□□ -2.2
CHD9-215ENST00000565442 PPP1R14BQ96C90 147 aa1.31□□□□□ -2.2
CHD9-215ENST00000565442 TMEM147Q9BVK8 224 aa1.31□□□□□ -2.2
CHD9-215ENST00000565442 CKLFQ9UBR5 152 aa1.31□□□□□ -2.2
CHD9-215ENST00000565442 ARHGEF10O15013 1369 aa1.31□□□□□ -2.2
CHD9-215ENST00000565442 RGPD3A6NKT7 1758 aaPredicted RBP1.31□□□□□ -2.2
CHD9-215ENST00000565442 LAMB1P07942 1786 aa1.31□□□□□ -2.2
CHD9-215ENST00000565442 RGPD4Q7Z3J3 1758 aa1.31□□□□□ -2.2
CHD9-215ENST00000565442 PAPPA2Q9BXP8 1791 aa1.31□□□□□ -2.2
CHD9-215ENST00000565442 DOCK2Q92608 1830 aa1.31□□□□□ -2.2
CHD9-215ENST00000565442 DDX60LQ5H9U9 1706 aaKnown RBP1.3□□□□□ -2.2
CHD9-215ENST00000565442 IGKV3-7A0A075B6H7 116 aa1.3□□□□□ -2.2
CHD9-215ENST00000565442 IGKV1D-42A0A075B6H8 117 aa1.3□□□□□ -2.2
CHD9-215ENST00000565442 PQLC2LA1A4F0 135 aa1.3□□□□□ -2.2
CHD9-215ENST00000565442 RPP14O95059 124 aaKnown RBP1.3□□□□□ -2.2
CHD9-215ENST00000565442 SERPINA6P08185 405 aa1.3□□□□□ -2.2
CHD9-215ENST00000565442 CRYGAP11844 174 aa1.3□□□□□ -2.2
CHD9-215ENST00000565442 FKBP2P26885 142 aaKnown RBP1.3□□□□□ -2.2
CHD9-215ENST00000565442 KRTAP10-4P60372 401 aaPredicted RBP1.3□□□□□ -2.2
CHD9-215ENST00000565442 AESQ08117 197 aa1.3□□□□□ -2.2
CHD9-215ENST00000565442 ZNF846Q147U1 533 aa1.3□□□□□ -2.2
CHD9-215ENST00000565442 TERB2Q8NHR7 220 aa1.3□□□□□ -2.2
CHD9-215ENST00000565442 H1FXQ92522 213 aaKnown RBP1.3□□□□□ -2.2
CHD9-215ENST00000565442 TOMM6Q96B49 74 aa1.3□□□□□ -2.2
CHD9-215ENST00000565442 TSPAN32Q96QS1 320 aa1.3□□□□□ -2.2
CHD9-215ENST00000565442 REG4Q9BYZ8 158 aa1.3□□□□□ -2.2
CHD9-215ENST00000565442 MED9Q9NWA0 146 aa1.3□□□□□ -2.2
CHD9-215ENST00000565442 TMEM56-RWDD3S4R434 201 aa1.3□□□□□ -2.2
CHD9-215ENST00000565442 FER1L6Q2WGJ9 1857 aa1.3□□□□□ -2.2
CHD9-215ENST00000565442 RTL1A6NKG5 1358 aa1.3□□□□□ -2.2
CHD9-215ENST00000565442 MYH7P12883 1935 aa1.3□□□□□ -2.2
CHD9-215ENST00000565442 RIC1Q4ADV7 1423 aa1.3□□□□□ -2.2
CHD9-215ENST00000565442 COL1A1P02452 1464 aaPredicted RBP1.3□□□□□ -2.2
CHD9-215ENST00000565442 COL6A6A6NMZ7 2263 aa1.29□□□□□ -2.2
CHD9-215ENST00000565442 TRAV9-1A0A075B6T8 112 aa1.29□□□□□ -2.2
CHD9-215ENST00000565442 TRAV26-2A0A0B4J265 109 aa1.29□□□□□ -2.2
CHD9-215ENST00000565442 FAM236DA0A1B0GTK5 79 aa1.29□□□□□ -2.2
CHD9-215ENST00000565442 HTR1AP08908 422 aa1.29□□□□□ -2.2
CHD9-215ENST00000565442 FAM236CP0DP71 79 aa1.29□□□□□ -2.2
CHD9-215ENST00000565442 MIR17HGQ75NE6 70 aa1.29□□□□□ -2.2
CHD9-215ENST00000565442 SERPINI1Q99574 410 aa1.29□□□□□ -2.2
CHD9-215ENST00000565442 MYO3BQ8WXR4 1341 aa1.29□□□□□ -2.2
CHD9-215ENST00000565442 ZNF831Q5JPB2 1677 aa1.29□□□□□ -2.2
CHD9-215ENST00000565442 ARFGEF1Q9Y6D6 1849 aa1.29□□□□□ -2.2
CHD9-215ENST00000565442 TRAV14DV4A0A0A6YYC5 116 aa1.28□□□□□ -2.2
CHD9-215ENST00000565442 BUB1B-PAK6H3BSN5 160 aa1.28□□□□□ -2.2
CHD9-215ENST00000565442 KPNA3O00505 521 aaPredicted RBP1.28□□□□□ -2.2
CHD9-215ENST00000565442 OR5F1O95221 314 aa1.28□□□□□ -2.2
CHD9-215ENST00000565442 CNIH1O95406 144 aa1.28□□□□□ -2.2
CHD9-215ENST00000565442 TTRP02766 147 aa1.28□□□□□ -2.2
CHD9-215ENST00000565442 S100A6P06703 90 aa1.28□□□□□ -2.2
CHD9-215ENST00000565442 SPI1P17947 270 aa1.28□□□□□ -2.2
CHD9-215ENST00000565442 HOXA6P31267 233 aa1.28□□□□□ -2.2
CHD9-215ENST00000565442 LSM6P62312 80 aaKnown RBP1.28□□□□□ -2.2
CHD9-215ENST00000565442 RANP62826 216 aaKnown RBP1.28□□□□□ -2.2
CHD9-215ENST00000565442 KHDC3LQ587J8 217 aa1.28□□□□□ -2.2
CHD9-215ENST00000565442 C10orf55Q5SWW7 151 aa1.28□□□□□ -2.2
CHD9-215ENST00000565442 Q6ZQT0 140 aa1.28□□□□□ -2.2
CHD9-215ENST00000565442 LINC00471Q8N535 108 aa1.28□□□□□ -2.2
CHD9-215ENST00000565442 OR5A1Q8NGJ0 315 aa1.28□□□□□ -2.2
CHD9-215ENST00000565442 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.28□□□□□ -2.2
CHD9-215ENST00000565442 SLC39A9Q9NUM3 307 aa1.28□□□□□ -2.2
CHD9-215ENST00000565442 CPDO75976 1380 aa1.28□□□□□ -2.2
CHD9-215ENST00000565442 BCL9O00512 1426 aa1.28□□□□□ -2.2
CHD9-215ENST00000565442 PSME4Q14997 1843 aa1.28□□□□□ -2.2
CHD9-215ENST00000565442 FOCADQ5VW36 1801 aa1.28□□□□□ -2.2
CHD9-215ENST00000565442 PHIPQ8WWQ0 1821 aa1.28□□□□□ -2.2
CHD9-215ENST00000565442 RP1P56715 2156 aa1.28□□□□□ -2.2
CHD9-215ENST00000565442 ARFGEF3Q5TH69 2177 aa1.28□□□□□ -2.2
CHD9-215ENST00000565442 FLG2Q5D862 2391 aaPredicted RBP1.27□□□□□ -2.21
CHD9-215ENST00000565442 MYH8P13535 1937 aa1.27□□□□□ -2.21
CHD9-215ENST00000565442 AKAP11Q9UKA4 1901 aa1.27□□□□□ -2.21
CHD9-215ENST00000565442 RBBP6Q7Z6E9 1792 aaKnown RBP1.27□□□□□ -2.21
CHD9-215ENST00000565442 GOLGA6L19H0YKK7 550 aa1.27□□□□□ -2.21
CHD9-215ENST00000565442 IFNA10P01566 189 aa1.27□□□□□ -2.21
CHD9-215ENST00000565442 TCRBP04435 133 aa1.27□□□□□ -2.21
CHD9-215ENST00000565442 CTSDP07339 412 aaPredicted RBP1.27□□□□□ -2.21
CHD9-215ENST00000565442 G6PCP35575 357 aa1.27□□□□□ -2.21
CHD9-215ENST00000565442 CDKN2CP42773 168 aa1.27□□□□□ -2.21
CHD9-215ENST00000565442 DPPA3Q6W0C5 159 aa1.27□□□□□ -2.21
CHD9-215ENST00000565442 ZNF826PQ6ZT77 177 aa1.27□□□□□ -2.21
CHD9-215ENST00000565442 ZNF565Q8N9K5 539 aa1.27□□□□□ -2.21
CHD9-215ENST00000565442 ITFG2Q969R8 447 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms