RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 LRTM2Q8N967 370 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 BPIFCQ8NFQ6 507 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 OR1B1Q8NGR6 318 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 TRGV9Q99603 122 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 C7orf50Q9BRJ6 194 aaKnown RBP4.63□□□□□ -1.67
TCF4-228ENST00000565393 TMEM147Q9BVK8 224 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 WDR12Q9GZL7 423 aaKnown RBP4.63□□□□□ -1.67
TCF4-228ENST00000565393 SAV1Q9H4B6 383 aaPredicted RBP4.63□□□□□ -1.67
TCF4-228ENST00000565393 PSENENQ9NZ42 101 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 PLA2G2EQ9NZK7 142 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 STRAPQ9Y3F4 350 aaKnown RBP4.63□□□□□ -1.67
TCF4-228ENST00000565393 V9GYH0 126 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 HLA-DRB4X5D2U9 266 aa4.63□□□□□ -1.67
TCF4-228ENST00000565393 C9orf170A2RU37 121 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 TMEM189A5PLL7 270 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 SMIM9A6NGZ8 99 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 CENPXA8MT69 81 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 F6UB75 175 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 H3BP45 60 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 ISLRO14498 428 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 ADAP1O75689 374 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 IL5P05113 134 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 PSMB3P49720 205 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 POLR2GP62487 172 aaKnown RBP eCLIP4.62□□□□□ -1.67
TCF4-228ENST00000565393 AKR1C1Q04828 323 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 ZNF79Q15937 498 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 C4orf46Q504U0 113 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 SPATA31B1PQ5VZV4 182 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 TRIQKQ629K1 86 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 FOXI2Q6ZQN5 318 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 CCDC190Q86UF4 302 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 THAP8Q8NA92 274 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 LRRC20Q8TCA0 184 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 DEDD2Q8WXF8 326 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 TRIM63Q969Q1 353 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 RPRMQ9NS64 109 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 GSKIPQ9P0R6 139 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 DOK5Q9P104 306 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 FLVCR2Q9UPI3 526 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 GOLT1BQ9Y3E0 138 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 DNAH9Q9NYC9 4486 aa4.62□□□□□ -1.67
TCF4-228ENST00000565393 IGKV1OR2-108A0A075B7D4 117 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 NAP1L6A6NFF2 107 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 ZNF98A6NK75 572 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 NDUFB6O95139 128 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 SCGB1D2O95969 90 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 HBE1P02100 147 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 OR5G3P0C626 314 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 HTN3P15516 51 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 ANXA7P20073 488 aaKnown RBP4.61□□□□□ -1.67
TCF4-228ENST00000565393 MEOX2P50222 304 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 RAP2BP61225 183 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 RRAS2P62070 204 aaPredicted RBP4.61□□□□□ -1.67
TCF4-228ENST00000565393 ID3Q02535 119 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 BAK1Q16611 211 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 SAMD13Q5VXD3 122 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 IGFL4Q6B9Z1 124 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 TMEM182Q6ZP80 229 aaPredicted RBP4.61□□□□□ -1.67
TCF4-228ENST00000565393 CYP2G1PQ6ZSU1 146 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 NEU1Q99519 415 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 TMEM208Q9BTX3 173 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 NDUFAF3Q9BU61 184 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 RNF126Q9BV68 326 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 SLC35B3Q9H1N7 401 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 PPP1R14DQ9NXH3 145 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 CELA1Q9UNI1 258 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 RFNGQ9Y644 331 aa4.61□□□□□ -1.67
TCF4-228ENST00000565393 STAB2Q8WWQ8 2551 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 A0A0J9YX75 114 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 LOC102723971A0A1B0GUV8 181 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 ZNF705FA8MVS1 300 aaPredicted RBP4.6□□□□□ -1.67
TCF4-228ENST00000565393 M0R2N4 97 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 SOCS3O14543 225 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 SSSCA1O60232 199 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 HYPMO75409 117 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 DUSP14O95147 198 aaKnown RBP4.6□□□□□ -1.67
TCF4-228ENST00000565393 OR4E1P0C645 316 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 METTL15P1P0C7V9 234 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 ZNF705DP0CH99 300 aaPredicted RBP4.6□□□□□ -1.67
TCF4-228ENST00000565393 ZNF705BP0CI00 300 aaPredicted RBP4.6□□□□□ -1.67
TCF4-228ENST00000565393 P0DMU3 169 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 FAM231AP0DMU4 169 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 FAM231CP0DMU5 169 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 UBE2MP61081 183 aaKnown RBP4.6□□□□□ -1.67
TCF4-228ENST00000565393 RHOBP62745 196 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 RRN3P1Q2M238 152 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 FAM222AQ5U5X8 452 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 ZNF705AQ6ZN79 300 aaPredicted RBP4.6□□□□□ -1.67
TCF4-228ENST00000565393 TMEM144Q7Z5S9 345 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 S100A7AQ86SG5 101 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 C1orf158Q8N1D5 194 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 OR10P1Q8NGE3 313 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 OR4D5Q8NGN0 318 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 SMIM8Q96KF7 97 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 C20orf173Q96LM9 149 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 CLUHP3Q96NS8 147 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 GPR82Q96P67 336 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 NIPSNAP3BQ9BS92 247 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 SCRT1Q9BWW7 348 aa4.6□□□□□ -1.67
TCF4-228ENST00000565393 SRRQ9GZT4 340 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms