RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 SRSF2Q01130 221 aaKnown RBP4.24□□□□□ -1.73
SMG1-211ENST00000565324 LY6EQ16553 131 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 SPSB3Q6PJ21 355 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 CLEC19AQ6UXS0 136 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 COL5A3P25940 1745 aaPredicted RBP4.24□□□□□ -1.73
SMG1-211ENST00000565324 RAMP3O60896 148 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 TMEM141Q96I45 108 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 FREM1Q5H8C1 2179 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 SAA2-SAA4A0A096LPE2 208 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 IGHV1-24A0A0C4DH33 117 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 SAA2P0DJI9 122 aaPredicted RBP4.24□□□□□ -1.73
SMG1-211ENST00000565324 LINC01590Q5TEZ4 76 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 IL17RELQ6ZVW7 336 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 SNHG12Q9BXW3 62 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 CACNA1BQ00975 2339 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 PCNX1Q96RV3 2341 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 MMP23AO75900 390 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 C3orf79P0CE67 100 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 PRCDQ00LT1 54 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 PRIMA1Q86XR5 153 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 TRGV9Q99603 122 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 ARHGAP32A7KAX9 2087 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 NCR2O95944 276 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 SPATA31B1PQ5VZV4 182 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 ANKRD29Q8N6D5 301 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 KIAA1549Q9HCM3 1950 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 VWA8A3KMH1 1905 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 TMEM133Q9H2Q1 129 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 RCHY1Q96PM5 261 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 PLXNB1O43157 2135 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 IGHV3-64A0A075B6Q5 118 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 IGHV2OR16-5A0A0B4J2B6 119 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 GAGE12JA6NER3 117 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 GAGE7O76087 117 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 GAGE12FP0CL80 117 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 GAGE12GP0CL81 117 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 GAGE12IP0CL82 117 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 GAGE4Q13068 117 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 ZNRF1Q8ND25 227 aa4.24□□□□□ -1.73
SMG1-211ENST00000565324 ARHGAP21Q5T5U3 1957 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 FAM231BA6NCW3 169 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 K7EP13 123 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 C9orf50Q5SZB4 431 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 FHL5Q5TD97 284 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 REPIN1Q9BWE0 567 aaKnown RBP4.23□□□□□ -1.73
SMG1-211ENST00000565324 NRXN2Q9P2S2 1712 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 MORN2Q502X0 79 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 TRBV7-1A0A0A6YYK4 115 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 J3KT08 172 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 Q0VG73 95 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 PRSS22Q9GZN4 317 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 IGHG3P01860 377 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 ID3Q02535 119 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 GAGE5Q13069 117 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 GAGE6Q13070 117 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 TMEM52Q8NDY8 209 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 NUP35Q8NFH5 326 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 C1QTNF5Q9BXJ0 243 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 FBXL15Q9H469 300 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 ZNF106Q9H2Y7 1883 aaKnown RBP4.23□□□□□ -1.73
SMG1-211ENST00000565324 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.23□□□□□ -1.734e-7■■■■■ 28.7
SMG1-211ENST00000565324 LINC01565O15544 149 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 CELA2BP08218 269 aaPredicted RBP4.23□□□□□ -1.73
SMG1-211ENST00000565324 AZU1P20160 251 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 RBM3P98179 157 aaKnown RBP4.23□□□□□ -1.73
SMG1-211ENST00000565324 GFI1BQ5VTD9 330 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 LY6G5BQ8NDX9 201 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 CSTL1Q9H114 145 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 PKIGQ9Y2B9 76 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 MRPS18CQ9Y3D5 142 aaKnown RBP4.23□□□□□ -1.73
SMG1-211ENST00000565324 HAX1O00165 279 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 CCL4P13236 92 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 GLRX5Q86SX6 157 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 SMIM20Q8N5G0 67 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 TMEM158Q8WZ71 300 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 GAGE12HA6NDE8 117 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 NABP1Q96AH0 204 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 C1orf43Q9BWL3 253 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 LY6G6FQ5SQ64 297 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 TRPT1Q86TN4 253 aaKnown RBP4.23□□□□□ -1.73
SMG1-211ENST00000565324 SPATA25Q9BR10 227 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 A0A0G2JK05 382 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 PKDREJQ9NTG1 2253 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 IGHV3-49A0A0A0MS15 119 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 SIVA1O15304 175 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 FOXL2P58012 376 aa4.23□□□□□ -1.73
SMG1-211ENST00000565324 SRSF8Q9BRL6 282 aaKnown RBP4.23□□□□□ -1.73
SMG1-211ENST00000565324 CENPVL1A0A0U1RR11 272 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 NPIPB5A8MRT5 1133 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 PAX8Q06710 450 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 LINC01545Q5VT33 79 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 MRPL14Q6P1L8 145 aaKnown RBP4.22□□□□□ -1.73
SMG1-211ENST00000565324 TANC2Q9HCD6 1990 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 TET1Q8NFU7 2136 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 ACACAQ13085 2346 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.22□□□□□ -1.73
SMG1-211ENST00000565324 K7EMI3 77 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 CXCL1P09341 107 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 FAM168AQ92567 244 aa4.22□□□□□ -1.73
SMG1-211ENST00000565324 CRIM1Q9NZV1 1036 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms