RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 UBL4BQ8N7F7 174 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 DAND5Q8N907 189 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 ST6GALNAC3Q8NDV1 305 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 OR11H2Q8NH07 326 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 OR4X1Q8NH49 305 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 TESCQ96BS2 214 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 UPK3BQ9BT76 320 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 TXNL4BQ9NX01 149 aaKnown RBP1.16□□□□□ -2.22
PALB2-203ENST00000565038 PSORS1C2Q9UIG4 136 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 DKKL1Q9UK85 242 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 RNF11Q9Y3C5 154 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 FAM215AQ9Y5M1 114 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 V9GYY5 206 aaPredicted RBP1.16□□□□□ -2.22
PALB2-203ENST00000565038 ZANQ9Y493 2812 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 DNAH1Q9P2D7 4330 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 DNAH11Q96DT5 4516 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 MED13LQ71F56 2210 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 ROS1P08922 2347 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 ATRQ13535 2644 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 CHD5Q8TDI0 1954 aa1.16□□□□□ -2.22
PALB2-203ENST00000565038 MED12Q93074 2177 aa1.15□□□□□ -2.22
PALB2-203ENST00000565038 HERC2O95714 4834 aa1.15□□□□□ -2.22
PALB2-203ENST00000565038 SCN3AQ9NY46 2000 aa1.15□□□□□ -2.22
PALB2-203ENST00000565038 ZGRF1Q86YA3 2104 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 PCLOQ9Y6V0 5065 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 TMED7-TICAM2A0A0A6YYA0 188 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 TRAV17A0A0B4J275 112 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 MDFIC2A0A1B0GVS7 189 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 DHRS12A0PJE2 317 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 IGKV2-29A2NJV5 120 aaPredicted RBP1.15□□□□□ -2.23
PALB2-203ENST00000565038 GRIFINA4D1Z8 144 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 C11orf86A6NJI1 115 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 MIF4GDA9UHW6 222 aaKnown RBP1.15□□□□□ -2.23
PALB2-203ENST00000565038 E5RI56 91 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 LRRN3E7EW58 273 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 TXNDC9O14530 226 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 OR2J2O76002 312 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 IFNA16P05015 189 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 IGHV3-30-3P0DP02 117 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 CCL3P10147 92 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 ALOX5APP20292 161 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 NPPCP23582 126 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 AP2S1P53680 142 aaPredicted RBP1.15□□□□□ -2.23
PALB2-203ENST00000565038 CTBP2P56545 445 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 FGF12P61328 243 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 ZNF791Q3KP31 576 aaPredicted RBP1.15□□□□□ -2.23
PALB2-203ENST00000565038 C1orf195Q5TG92 126 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 TNFAIP8L2Q6P589 184 aaPredicted RBP1.15□□□□□ -2.23
PALB2-203ENST00000565038 SBSNQ6UWP8 590 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 C3orf62Q6ZUJ4 267 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 C2orf91Q6ZV80 131 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 WFDC11Q8NEX6 87 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 OR2D3Q8NGH3 330 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 FNDC9Q8TBE3 224 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 PIGXQ8TBF5 258 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 DCANP1Q8TF63 244 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 RAB2BQ8WUD1 216 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 MS4A6EQ96DS6 147 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 GNB1LQ9BYB4 327 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 OR8D2Q9GZM6 311 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 C11orf1Q9H5F2 150 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 C16orf95Q9H693 158 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 CXorf21Q9HAI6 301 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 PARVBQ9HBI1 364 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 PRTFDC1Q9NRG1 225 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 POLR1DQ9Y2S0 133 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 ASB4Q9Y574 426 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 SCN8AQ9UQD0 1980 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 C2CD3Q4AC94 2353 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 STAB1Q9NY15 2570 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 HRNRQ86YZ3 2850 aaPredicted RBP1.15□□□□□ -2.23
PALB2-203ENST00000565038 DNAH17Q9UFH2 4485 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 TLN2Q9Y4G6 2542 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 ANKRD36A6QL64 1941 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 ABCA13Q86UQ4 5058 aa1.15□□□□□ -2.23
PALB2-203ENST00000565038 DNAH2Q9P225 4427 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 SONP18583 2426 aaKnown RBP1.14□□□□□ -2.23
PALB2-203ENST00000565038 USF3Q68DE3 2245 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 FAM159BA6NKW6 160 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 SLC17A3O00476 420 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 CXCR6O00574 342 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 NSA2O95478 260 aaKnown RBP1.14□□□□□ -2.23
PALB2-203ENST00000565038 IGHV1-69P01742 117 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 UQCRHP07919 91 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 IL3P08700 152 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 COX6B1P14854 86 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 MAP2K4P45985 399 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 TCL1AP56279 114 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 TAS2R30P59541 319 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 GNG11P61952 73 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 TBPL1P62380 186 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 REEP5Q00765 189 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 PLGLB1Q02325 96 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 RELAQ04206 551 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 EBPQ15125 230 aaKnown RBP1.14□□□□□ -2.23
PALB2-203ENST00000565038 TMED2Q15363 201 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 NNATQ16517 81 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 SLC36A2Q495M3 483 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 SPANXN3Q5MJ09 141 aa1.14□□□□□ -2.23
PALB2-203ENST00000565038 LGALS9CQ6DKI2 356 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms