RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 CST7O76096 145 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 DUTP33316 252 aaKnown RBP4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 SPINT3P49223 89 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 CCL23P55773 120 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 CLDN17P56750 224 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 TESK1Q15569 626 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 MRPL2Q5T653 305 aaKnown RBP4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 CFAP126Q5VTH2 177 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 PLPP4Q5VZY2 271 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 C2orf91Q6ZV80 131 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 WDR83OSQ9Y284 106 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 SERP1Q9Y6X1 66 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 MCM3APO60318 1980 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 MYO16Q9Y6X6 1858 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 LRRK2Q5S007 2527 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 CD52P31358 61 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 CXCL5P42830 114 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 PCBD1P61457 104 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 CDSNQ15517 529 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 ZNF493Q6ZR52 646 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 ZNF441Q8N8Z8 693 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 C10orf105Q8TEF2 133 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 EPDR1Q9UM22 224 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 CKAP5Q14008 2032 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 PGPA6NDG6 321 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 HLA-DRB4P13762 266 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 PSMB2P49721 201 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 HLA-DRB4X5D2U9 266 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 SCN10AQ9Y5Y9 1956 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 hADV29S1A0JD25 119 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 SYNGR2O43760 224 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 TCRAP04437 139 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 SUB1P53999 127 aaKnown RBP eCLIP4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 HBG2P69892 147 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 IER5LQ5T953 404 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 EBLN2Q6P2I7 272 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 NT5CQ8TCD5 201 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 ZPLD1Q8TCW7 415 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 ZNF689Q96CS4 500 aaPredicted RBP4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 SHANK2-AS3Q9BTD1 123 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 PRO0461Q9UI25 63 aa4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 AMMECR1Q9Y4X0 333 aaPredicted RBP4.79□□□□□ -1.64
TUBGCP4-207ENST00000563963 KIAA1671Q9BY89 1806 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 GTF3C1Q12789 2109 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 MED12LQ86YW9 2145 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 DENND4CQ5VZ89 1909 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 IGLV3-16A0A075B6K0 115 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 IGHV1-24A0A0C4DH33 117 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 UBE2E1P51965 193 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 LOXL1Q08397 574 aaPredicted RBP4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 C11orf45Q8TAV5 145 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 ZNF721Q8TF20 911 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 UBE2E2Q96LR5 201 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 NUP210LQ5VU65 1888 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 H3BT86 120 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 LGALS3P17931 250 aaKnown RBP4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 Q6ZQT7 251 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 ZCCHC24Q8N2G6 241 aaKnown RBP4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 SLC22A24Q8N4F4 322 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 LINC00311Q8N616 119 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 AAMDCQ9H7C9 122 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 TEP1Q99973 2627 aaKnown RBP4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 DOCK4Q8N1I0 1966 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 LOC107984156A0A0G2JMH3 177 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 HAX1O00165 279 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 ASAH2BP0C7U1 165 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 TCF15Q12870 199 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 DGAT2L6Q6ZPD8 337 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 ARL17AQ8IVW1 177 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 ZNF295-AS1Q8N0V1 137 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 ZNF645Q8N7E2 425 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 LINC00482Q8N8I6 264 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 H1FXQ92522 213 aaKnown RBP4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 IGF2BP2-AS1Q96M15 143 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 KLK13Q9UKR3 277 aa4.78□□□□□ -1.64
TUBGCP4-207ENST00000563963 AKAP9Q99996 3911 aa4.78□□□□□ -1.65
TUBGCP4-207ENST00000563963 TRGV11A0A075B6L2 103 aa4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 LOC107986453A0A1B0GWG9 222 aa4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 H3BP45 60 aa4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 RPL18AQ02543 176 aaKnown RBP4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 ZNF56Q15929 161 aa4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 LINC01545Q5VT33 79 aa4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 TEPPQ6URK8 271 aa4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 ITPR3Q14573 2671 aa4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 TRBV7-7A0A0K0K1E9 115 aa4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 F2Z2F3 143 aa4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 MGST3O14880 152 aa4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 HMGN2P05204 90 aaKnown RBP4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 RPL30P62888 115 aaKnown RBP4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 ARL16Q0P5N6 197 aa4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 CHCHD1Q96BP2 118 aaKnown RBP4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 SPACA5Q96QH8 159 aa4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 AICDAQ9GZX7 198 aa4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 HIGD1BQ9P298 99 aa4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 LINC00527Q9UJ94 153 aa4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 CABIN1Q9Y6J0 2220 aa4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 LAMA3Q16787 3333 aa4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 C2orf70A6NJV1 201 aa4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 LOXL3P58215 753 aa4.77□□□□□ -1.65
TUBGCP4-207ENST00000563963 PQLC2Q6ZP29 291 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms