RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 OR8I2Q8N0Y5 310 aa22.52■■□□□ 1.2
CMTM4-204ENST00000563952 OR10P1Q8NGE3 313 aa22.52■■□□□ 1.2
CMTM4-204ENST00000563952 ENKURQ8TC29 256 aa22.52■■□□□ 1.2
CMTM4-204ENST00000563952 LSM5Q9Y4Y9 91 aaKnown RBP22.52■■□□□ 1.2
CMTM4-204ENST00000563952 STARD9Q9P2P6 4700 aa22.52■■□□□ 1.19
CMTM4-204ENST00000563952 C7orf66A4D0T2 115 aa22.51■■□□□ 1.19
CMTM4-204ENST00000563952 L7N2F9 121 aa22.51■■□□□ 1.19
CMTM4-204ENST00000563952 VAMP2P63027 116 aa22.51■■□□□ 1.19
CMTM4-204ENST00000563952 DLK1P80370 383 aa22.51■■□□□ 1.19
CMTM4-204ENST00000563952 RARRES2Q99969 163 aa22.51■■□□□ 1.19
CMTM4-204ENST00000563952 CSMD3Q7Z407 3707 aa22.51■■□□□ 1.19
CMTM4-204ENST00000563952 EWSR1Q01844 656 aaKnown RBP eCLIP22.5■■□□□ 1.19
CMTM4-204ENST00000563952 CYP2G1PQ6ZSU1 146 aa22.5■■□□□ 1.19
CMTM4-204ENST00000563952 OR1B1Q8NGR6 318 aa22.5■■□□□ 1.19
CMTM4-204ENST00000563952 SEPSECSQ9HD40 501 aaKnown RBP22.5■■□□□ 1.19
CMTM4-204ENST00000563952 MGAT4CQ9UBM8 478 aa22.5■■□□□ 1.19
CMTM4-204ENST00000563952 IL5P05113 134 aa22.49■■□□□ 1.19
CMTM4-204ENST00000563952 OR11H2Q8NH07 326 aa22.49■■□□□ 1.19
CMTM4-204ENST00000563952 TMEM147Q9BVK8 224 aa22.49■■□□□ 1.19
CMTM4-204ENST00000563952 SLC25A22Q9H936 323 aa22.49■■□□□ 1.19
CMTM4-204ENST00000563952 K7EPK0 472 aa22.48■■□□□ 1.19
CMTM4-204ENST00000563952 IFITM3Q01628 133 aa22.48■■□□□ 1.19
CMTM4-204ENST00000563952 GSG1LQ6UXU4 331 aa22.48■■□□□ 1.19
CMTM4-204ENST00000563952 C2orf50Q96LR7 162 aa22.48■■□□□ 1.19
CMTM4-204ENST00000563952 DOK5Q9P104 306 aa22.48■■□□□ 1.19
CMTM4-204ENST00000563952 SLC45A2Q9UMX9 530 aa22.48■■□□□ 1.19
CMTM4-204ENST00000563952 SPP1P10451 314 aa22.47■■□□□ 1.19
CMTM4-204ENST00000563952 BCAP31P51572 246 aa22.47■■□□□ 1.19
CMTM4-204ENST00000563952 PMS2P11Q13670 270 aa22.47■■□□□ 1.19
CMTM4-204ENST00000563952 MORN3Q6PF18 240 aaPredicted RBP22.47■■□□□ 1.19
CMTM4-204ENST00000563952 LINC00052Q96N35 136 aa22.47■■□□□ 1.19
CMTM4-204ENST00000563952 NPVFQ9HCQ7 196 aa22.47■■□□□ 1.19
CMTM4-204ENST00000563952 ZNF98A6NK75 572 aa22.46■■□□□ 1.19
CMTM4-204ENST00000563952 ID1P41134 155 aa22.46■■□□□ 1.19
CMTM4-204ENST00000563952 ARL16Q0P5N6 197 aa22.46■■□□□ 1.19
CMTM4-204ENST00000563952 TMEM217Q8N7C4 229 aa22.46■■□□□ 1.19
CMTM4-204ENST00000563952 SLC25A32Q9H2D1 315 aa22.46■■□□□ 1.19
CMTM4-204ENST00000563952 BATF3Q9NR55 127 aa22.46■■□□□ 1.19
CMTM4-204ENST00000563952 CXorf65A6NEN9 183 aa22.45■■□□□ 1.18
CMTM4-204ENST00000563952 GIG44P09565 113 aaPredicted RBP22.45■■□□□ 1.18
CMTM4-204ENST00000563952 C4BPBP20851 252 aa22.45■■□□□ 1.18
CMTM4-204ENST00000563952 S100A10P60903 97 aa22.45■■□□□ 1.18
CMTM4-204ENST00000563952 FNDC10F2Z333 226 aa22.44■■□□□ 1.18
CMTM4-204ENST00000563952 S100A7P31151 101 aa22.44■■□□□ 1.18
CMTM4-204ENST00000563952 GALR1P47211 349 aa22.44■■□□□ 1.18
CMTM4-204ENST00000563952 CAV2P51636 162 aa22.44■■□□□ 1.18
CMTM4-204ENST00000563952 GPN1Q9HCN4 374 aaPredicted RBP22.44■■□□□ 1.18
CMTM4-204ENST00000563952 TENM2Q9NT68 2774 aa22.43■■□□□ 1.18
CMTM4-204ENST00000563952 LCE6AA0A183 80 aa22.43■■□□□ 1.18
CMTM4-204ENST00000563952 LINC00869P0C866 280 aa22.43■■□□□ 1.18
CMTM4-204ENST00000563952 PSMB3P49720 205 aa22.43■■□□□ 1.18
CMTM4-204ENST00000563952 SELENOTP62341 195 aa22.43■■□□□ 1.18
CMTM4-204ENST00000563952 TMEM41BQ5BJD5 291 aa22.43■■□□□ 1.18
CMTM4-204ENST00000563952 TEPPQ6URK8 271 aa22.43■■□□□ 1.18
CMTM4-204ENST00000563952 SOCS3O14543 225 aa22.42■■□□□ 1.18
CMTM4-204ENST00000563952 DEFB1P60022 68 aa22.42■■□□□ 1.18
CMTM4-204ENST00000563952 RAP2BP61225 183 aa22.42■■□□□ 1.18
CMTM4-204ENST00000563952 SLC38A11Q08AI6 406 aa22.42■■□□□ 1.18
CMTM4-204ENST00000563952 NRARPQ7Z6K4 114 aa22.42■■□□□ 1.18
CMTM4-204ENST00000563952 RSG1Q9BU20 258 aa22.42■■□□□ 1.18
CMTM4-204ENST00000563952 SCRT1Q9BWW7 348 aa22.42■■□□□ 1.18
CMTM4-204ENST00000563952 CLEC5AQ9NY25 188 aa22.42■■□□□ 1.18
CMTM4-204ENST00000563952 HIGD1AQ9Y241 93 aa22.42■■□□□ 1.18
CMTM4-204ENST00000563952 H3BMM0 161 aa22.41■■□□□ 1.18
CMTM4-204ENST00000563952 HYPMO75409 117 aa22.41■■□□□ 1.18
CMTM4-204ENST00000563952 DEDDO75618 318 aa22.41■■□□□ 1.18
CMTM4-204ENST00000563952 OR5G3P0C626 314 aa22.41■■□□□ 1.18
CMTM4-204ENST00000563952 PVALBP20472 110 aaPredicted RBP22.41■■□□□ 1.18
CMTM4-204ENST00000563952 GGACTQ9BVM4 153 aa22.41■■□□□ 1.18
CMTM4-204ENST00000563952 FAM24AA6NFZ4 105 aa22.4■■□□□ 1.18
CMTM4-204ENST00000563952 ATF4P18848 351 aaPredicted RBP22.4■■□□□ 1.18
CMTM4-204ENST00000563952 SLC25A39Q9BZJ4 359 aaPredicted RBP22.4■■□□□ 1.18
CMTM4-204ENST00000563952 C11orf1Q9H5F2 150 aa22.4■■□□□ 1.18
CMTM4-204ENST00000563952 H3BRN7 92 aa22.39■■□□□ 1.17
CMTM4-204ENST00000563952 ISLRO14498 428 aa22.39■■□□□ 1.17
CMTM4-204ENST00000563952 DEFB4AO15263 64 aa22.39■■□□□ 1.17
CMTM4-204ENST00000563952 CST7O76096 145 aa22.39■■□□□ 1.17
CMTM4-204ENST00000563952 HLA-DRB4P13762 266 aa22.39■■□□□ 1.17
CMTM4-204ENST00000563952 RAB32Q13637 225 aa22.39■■□□□ 1.17
CMTM4-204ENST00000563952 GDF5OSQ5U4N7 250 aa22.39■■□□□ 1.17
CMTM4-204ENST00000563952 C16orf92Q96LL3 132 aa22.39■■□□□ 1.17
CMTM4-204ENST00000563952 GPR82Q96P67 336 aa22.39■■□□□ 1.17
CMTM4-204ENST00000563952 SHANK2-AS3Q9BTD1 123 aa22.39■■□□□ 1.17
CMTM4-204ENST00000563952 HLA-DRB4X5D2U9 266 aa22.39■■□□□ 1.17
CMTM4-204ENST00000563952 DYNC2H1Q8NCM8 4307 aaKnown RBP22.39■■□□□ 1.17
CMTM4-204ENST00000563952 MEOX2P50222 304 aa22.38■■□□□ 1.17
CMTM4-204ENST00000563952 PLP1P60201 277 aa22.38■■□□□ 1.17
CMTM4-204ENST00000563952 NUTF2P61970 127 aaKnown RBP22.38■■□□□ 1.17
CMTM4-204ENST00000563952 UHRF2Q96PU4 802 aa22.38■■□□□ 1.17
CMTM4-204ENST00000563952 ARL6Q9H0F7 186 aa22.38■■□□□ 1.17
CMTM4-204ENST00000563952 C11orf68Q9H3H3 251 aaKnown RBP22.38■■□□□ 1.17
CMTM4-204ENST00000563952 INMT-MINDY4F8WBC2 141 aa22.37■■□□□ 1.17
CMTM4-204ENST00000563952 GOSR2O14653 212 aa22.37■■□□□ 1.17
CMTM4-204ENST00000563952 IGKV3-20P01619 116 aa22.37■■□□□ 1.17
CMTM4-204ENST00000563952 IL15RAQ13261 267 aa22.37■■□□□ 1.17
CMTM4-204ENST00000563952 SAMD13Q5VXD3 122 aa22.37■■□□□ 1.17
CMTM4-204ENST00000563952 ZNF546Q86UE3 836 aa22.37■■□□□ 1.17
CMTM4-204ENST00000563952 AGPAT2O15120 278 aa22.36■■□□□ 1.17
CMTM4-204ENST00000563952 DEFA1P59665 94 aa22.36■■□□□ 1.17
CMTM4-204ENST00000563952 DEFA3P59666 94 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms