RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 RHOGP84095 191 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 MYL5Q02045 173 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 PLCXD2Q0VAA5 305 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 ESRGQ1W209 222 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 C10orf55Q5SWW7 151 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 ARFGEF3Q5TH69 2177 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 C1orf140Q5VVS0 124 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 UNQ6190/PRO20217Q6UXQ8 127 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 ANGPTL5Q86XS5 388 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 INTS1Q8N201 2190 aaKnown RBP0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 LINC00471Q8N535 108 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 DEFB119Q8N690 84 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 ZNF563Q8TA94 476 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 AQP3Q92482 292 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 SELENOSQ9BQE4 189 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 NAA38Q9BRA0 125 aaKnown RBP0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 PBDC1Q9BVG4 233 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 OR2J1Q9GZK6 312 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 BCL2L10Q9HD36 194 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 MYH3P11055 1940 aa0.68□□□□□ -2.3
HMGB1P33-201ENST00000563485 CAMSAP2Q08AD1 1489 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 DOCK4Q8N1I0 1966 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 CD109Q6YHK3 1445 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 SETD5Q9C0A6 1442 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 IGKV1D-42A0A075B6H8 117 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 TRGV2A0A075B6R0 118 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 C2orf70A6NJV1 201 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 LYZL6O75951 148 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 DHFRP00374 187 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 TRGC2P03986 189 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 CSN2P05814 226 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 NBEAP1P0C6P0 100 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 G0S2P27469 103 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 DYNLT1P63172 113 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 BRMS1LQ5PSV4 323 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 KRTAP26-1Q6PEX3 210 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 PATE2Q6UY27 113 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 PRR15Q8IV56 129 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 PDZD9Q8IXQ8 264 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 SLC30A7Q8NEW0 376 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 PPTC7Q8NI37 304 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 STAG3L4Q8TBR4 150 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 C4orf3Q8WVX3 66 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 Q96M85 177 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 GPX7Q96SL4 187 aaPredicted RBP0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 SLC50A1Q9BRV3 221 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 PRADC1Q9BSG0 188 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 MRPL32Q9BYC8 188 aaKnown RBP0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 POPDC3Q9HBV1 291 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 MED29Q9NX70 200 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 OR5AC2Q9NZP5 309 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 NUBP2Q9Y5Y2 271 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 TENM3Q9P273 2699 aa0.67□□□□□ -2.3
HMGB1P33-201ENST00000563485 ANAPC1Q9H1A4 1944 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 PBRM1Q86U86 1689 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 RGS12O14924 1447 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 KDM6AO15550 1401 aaPredicted RBP0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 TNS3Q68CZ2 1445 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 MICAL3Q7RTP6 2002 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 LOC110117498A0A087WWA1 95 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 TRBV6-5A0A0K0K1A5 114 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 A0A1W2PRE2 83 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 MAP1LC3B2A6NCE7 125 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 PRORSD1PA6NEY8 169 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 C1orf196B1AJZ1 125 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 E7EQ34 232 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 E7EUB6 86 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 H3BQV1 296 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 TMEM256-PLSCR3K7ERE1 68 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 M0R2N4 97 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 NDUFB3O43676 98 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 FAM107AO95990 144 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 IFNA21P01568 189 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 CRHP06850 196 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 NFYBP25208 207 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 SSR2P43308 183 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 DYNLT3P51808 116 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 DSCR4P56555 118 aaPredicted RBP0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 ROMO1P60602 79 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 RAB4BP61018 213 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 CNBPP62633 177 aaKnown RBP0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 RPS28P62857 69 aaKnown RBP0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 SNCBQ16143 134 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 RTL8BQ17RB0 113 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 FKBP1CQ5VVH2 108 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 EIF5AL1Q6IS14 154 aaKnown RBP0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 DCUN1D2Q6PH85 259 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 SMIM15Q7Z3B0 74 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 TAC4Q86UU9 113 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 Q8IYB0 196 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 Q8N2B8 174 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 LINC00311Q8N616 119 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 ST6GALNAC3Q8NDV1 305 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 OR10K1Q8NGX5 313 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 OR4C6Q8NH72 309 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 ANP32BQ92688 251 aaKnown RBP0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 ISOC1Q96CN7 298 aa0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 ZNF625Q96I27 306 aaPredicted RBP0.66□□□□□ -2.3
HMGB1P33-201ENST00000563485 MAP1LC3BQ9GZQ8 125 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms