RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 A0A0J9YW62 118 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 SHISA8B8ZZ34 492 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 SLC25A16P16260 332 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 FOXC1Q12948 553 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 NPIPB3Q92617 1050 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 NUPR1O60356 82 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 CD3EP07766 207 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 VEGFBP49765 207 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 WFDC3Q8IUB2 231 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 LINC00479Q96M42 142 aa5.16□□□□□ -1.58
CLK3-212ENST00000563418 TMEM213A2RRL7 107 aa5.15□□□□□ -1.58
CLK3-212ENST00000563418 C4orf51C9J302 202 aa5.15□□□□□ -1.58
CLK3-212ENST00000563418 WNT2P09544 360 aa5.15□□□□□ -1.58
CLK3-212ENST00000563418 FAM104BQ5XKR9 115 aa5.15□□□□□ -1.58
CLK3-212ENST00000563418 SLC50A1Q9BRV3 221 aa5.15□□□□□ -1.58
CLK3-212ENST00000563418 GATA2P23769 480 aaPredicted RBP5.15□□□□□ -1.58
CLK3-212ENST00000563418 CD69Q07108 199 aa5.15□□□□□ -1.58
CLK3-212ENST00000563418 PRR30Q53SZ7 412 aaPredicted RBP5.15□□□□□ -1.58
CLK3-212ENST00000563418 ZNF114Q8NC26 417 aa5.15□□□□□ -1.58
CLK3-212ENST00000563418 FAM57AQ8TBR7 257 aa5.15□□□□□ -1.58
CLK3-212ENST00000563418 PRSS46E5RG02 174 aa5.15□□□□□ -1.58
CLK3-212ENST00000563418 STPG1Q5TH74 334 aa5.15□□□□□ -1.58
CLK3-212ENST00000563418 PVRIGQ6DKI7 326 aa5.15□□□□□ -1.58
CLK3-212ENST00000563418 CXorf67Q86X51 503 aaPredicted RBP5.15□□□□□ -1.58
CLK3-212ENST00000563418 CALYQ9NYX4 217 aa5.15□□□□□ -1.58
CLK3-212ENST00000563418 TRBV25-1A0A075B6N4 114 aa5.15□□□□□ -1.58
CLK3-212ENST00000563418 LOXL3P58215 753 aa5.15□□□□□ -1.58
CLK3-212ENST00000563418 VWC2Q2TAL6 325 aa5.15□□□□□ -1.58
CLK3-212ENST00000563418 CELA3BP08861 270 aa5.15□□□□□ -1.59
CLK3-212ENST00000563418 LIFP15018 202 aa5.15□□□□□ -1.59
CLK3-212ENST00000563418 MDP1Q86V88 176 aa5.15□□□□□ -1.59
CLK3-212ENST00000563418 MT-ATP8P03928 68 aa5.15□□□□□ -1.59
CLK3-212ENST00000563418 Q86TA4 180 aa5.15□□□□□ -1.59
CLK3-212ENST00000563418 Q8N8P6 123 aa5.15□□□□□ -1.59
CLK3-212ENST00000563418 TMEM141Q96I45 108 aa5.15□□□□□ -1.59
CLK3-212ENST00000563418 METTL26Q96S19 204 aa5.15□□□□□ -1.59
CLK3-212ENST00000563418 DEFB118Q96PH6 123 aa5.15□□□□□ -1.59
CLK3-212ENST00000563418 KIAA2026Q5HYC2 2103 aa5.15□□□□□ -1.59
CLK3-212ENST00000563418 C12orf77C9JDV5 145 aa5.15□□□□□ -1.59
CLK3-212ENST00000563418 FGF6P10767 208 aa5.15□□□□□ -1.59
CLK3-212ENST00000563418 IGFBP6P24592 240 aaPredicted RBP5.15□□□□□ -1.59
CLK3-212ENST00000563418 TMEM158Q8WZ71 300 aa5.15□□□□□ -1.59
CLK3-212ENST00000563418 E9PLD3 99 aa5.15□□□□□ -1.59
CLK3-212ENST00000563418 H3BT86 120 aa5.15□□□□□ -1.59
CLK3-212ENST00000563418 ESPL1Q14674 2120 aa5.15□□□□□ -1.59
CLK3-212ENST00000563418 F8VRH5 84 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 CNTFRP26992 372 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 PAX9P55771 341 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 GTSF1Q8WW33 167 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 PLPPR2Q96GM1 343 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 MYOFQ9NZM1 2061 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 TRAV12-3A0A0B4J271 114 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 TM4SF4P48230 202 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 TMEM243Q9BU79 118 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 PLXNB3Q9ULL4 1909 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 ATRXP46100 2492 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 TM4SF5O14894 197 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 SRSF8Q9BRL6 282 aaKnown RBP5.14□□□□□ -1.59
CLK3-212ENST00000563418 FAM186AA6NE01 2351 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 SMIM9A6NGZ8 99 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 ATP5EP56381 51 aaPredicted RBP5.14□□□□□ -1.59
CLK3-212ENST00000563418 CARD19Q96LW7 228 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 DUX3Q96PT4 197 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 HCSTQ9UBK5 93 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 F5H768 121 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 SPTY2D1-AS1A0A0U1RR47 76 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 A4D1N5 150 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 CEACAM4O75871 244 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 CISD3P0C7P0 127 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 CD27P26842 260 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 PDE6HQ13956 83 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 TRAV40A0A0B4J280 105 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 SOCS3O14543 225 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 CCL4L1Q8NHW4 92 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 PIFOQ8TCI5 191 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 CYYR1Q96J86 154 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 TRAV8-3A0A0A6YYJ7 113 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 M0QXV9 152 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 ZFP36L1Q07352 338 aaKnown RBP5.14□□□□□ -1.59
CLK3-212ENST00000563418 UFSP1Q6NVU6 142 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 MRPL55Q7Z7F7 128 aaKnown RBP5.14□□□□□ -1.59
CLK3-212ENST00000563418 RNF7Q9UBF6 113 aa5.14□□□□□ -1.59
CLK3-212ENST00000563418 RPUSD1Q9UJJ7 312 aaKnown RBP5.14□□□□□ -1.59
CLK3-212ENST00000563418 C15orf62A8K5M9 175 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 COL9A2Q14055 689 aaPredicted RBP5.13□□□□□ -1.59
CLK3-212ENST00000563418 NTN5Q8WTR8 489 aaPredicted RBP5.13□□□□□ -1.59
CLK3-212ENST00000563418 NLRC5Q86WI3 1866 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 IQCF6A8MYZ5 107 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 JMJD8Q96S16 334 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 TRGV9Q99603 122 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 SHANK1Q9Y566 2161 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 IGHV3-64DA0A0J9YX35 117 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 K7EN84 100 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 COL9A1P20849 921 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 TCF15Q12870 199 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 REPIN1Q9BWE0 567 aaKnown RBP5.13□□□□□ -1.59
CLK3-212ENST00000563418 PLXNA4Q9HCM2 1894 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 NUP210LQ5VU65 1888 aa5.13□□□□□ -1.59
CLK3-212ENST00000563418 DUTP33316 252 aaKnown RBP5.13□□□□□ -1.59
CLK3-212ENST00000563418 DUSP14O95147 198 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms